RNA–Protein interactions for RNA: ENST00000457601.1

SDHAP1-208, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4

Gene SDHAP1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-208ENST00000457601 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
SDHAP1-208ENST00000457601 UBR2Q8IWV8 1755 aa16.33■□□□□ 0.21
SDHAP1-208ENST00000457601 ZNF853P0CG23 659 aa16.33■□□□□ 0.2
SDHAP1-208ENST00000457601 SLFN5Q08AF3 891 aa16.33■□□□□ 0.2
SDHAP1-208ENST00000457601 FAM182BQ5T319 152 aa16.33■□□□□ 0.2
SDHAP1-208ENST00000457601 IFT57Q9NWB7 429 aa16.33■□□□□ 0.2
SDHAP1-208ENST00000457601 ERVV-2B6SEH9 535 aa16.32■□□□□ 0.2
SDHAP1-208ENST00000457601 E9PSI1 815 aa16.32■□□□□ 0.2
SDHAP1-208ENST00000457601 GNAI1P63096 354 aa16.32■□□□□ 0.2
SDHAP1-208ENST00000457601 KRT27Q7Z3Y8 459 aa16.32■□□□□ 0.2
SDHAP1-208ENST00000457601 CFAP44Q96MT7 982 aa16.32■□□□□ 0.2
SDHAP1-208ENST00000457601 FANCIQ9NVI1 1328 aa16.32■□□□□ 0.2
SDHAP1-208ENST00000457601 LAS1LQ9Y4W2 734 aaKnown RBP16.32■□□□□ 0.2
SDHAP1-208ENST00000457601 BTAF1O14981 1849 aa16.31■□□□□ 0.2
SDHAP1-208ENST00000457601 CABP4P57796 275 aa16.31■□□□□ 0.2
SDHAP1-208ENST00000457601 TSR2Q969E8 191 aaKnown RBP16.31■□□□□ 0.2
SDHAP1-208ENST00000457601 CHL1O00533 1208 aa16.3■□□□□ 0.2
SDHAP1-208ENST00000457601 TAF7Q15545 349 aaPredicted RBP16.3■□□□□ 0.2
SDHAP1-208ENST00000457601 DUSP27Q5VZP5 1158 aa16.3■□□□□ 0.2
SDHAP1-208ENST00000457601 TRMT2AQ8IZ69 625 aaKnown RBP16.3■□□□□ 0.2
SDHAP1-208ENST00000457601 NFATC2IPQ8NCF5 419 aa16.3■□□□□ 0.2
SDHAP1-208ENST00000457601 ACSBG1Q96GR2 724 aa16.3■□□□□ 0.2
SDHAP1-208ENST00000457601 MYH16Q9H6N6 1097 aa16.3■□□□□ 0.2
SDHAP1-208ENST00000457601 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
SDHAP1-208ENST00000457601 TMOD3Q9NYL9 352 aa16.29■□□□□ 0.2
SDHAP1-208ENST00000457601 MIS18AQ9NYP9 233 aa16.29■□□□□ 0.2
SDHAP1-208ENST00000457601 TSPYL4Q9UJ04 414 aa16.29■□□□□ 0.2
SDHAP1-208ENST00000457601 KCPQ6ZWJ8 1503 aa16.29■□□□□ 0.2
SDHAP1-208ENST00000457601 C5P01031 1676 aa16.28■□□□□ 0.2
SDHAP1-208ENST00000457601 BTBD11A6QL63 1104 aa16.28■□□□□ 0.2
SDHAP1-208ENST00000457601 PRIM1P49642 420 aaKnown RBP16.28■□□□□ 0.2
SDHAP1-208ENST00000457601 BABAM1Q9NWV8 329 aa16.28■□□□□ 0.2
SDHAP1-208ENST00000457601 KAT6BQ8WYB5 2073 aa16.28■□□□□ 0.2
SDHAP1-208ENST00000457601 PIGBQ92521 554 aa16.27■□□□□ 0.2
SDHAP1-208ENST00000457601 SYTL4Q96C24 671 aaPredicted RBP16.27■□□□□ 0.2
SDHAP1-208ENST00000457601 TNS1Q9HBL0 1735 aaKnown RBP16.27■□□□□ 0.19
SDHAP1-208ENST00000457601 LAMB4A4D0S4 1761 aa16.26■□□□□ 0.19
SDHAP1-208ENST00000457601 KCNQ2O43526 872 aa16.26■□□□□ 0.19
SDHAP1-208ENST00000457601 KCNQ3O43525 872 aa16.25■□□□□ 0.19
SDHAP1-208ENST00000457601 SLC39A6Q13433 755 aa16.25■□□□□ 0.19
SDHAP1-208ENST00000457601 FAM196AQ6ZSG2 479 aa16.25■□□□□ 0.19
SDHAP1-208ENST00000457601 CICQ96RK0 1608 aaPredicted RBP16.24■□□□□ 0.19
SDHAP1-208ENST00000457601 ZNF790Q6PG37 636 aa16.24■□□□□ 0.19
SDHAP1-208ENST00000457601 PTF1AQ7RTS3 328 aa16.24■□□□□ 0.19
SDHAP1-208ENST00000457601 TJP1Q07157 1748 aa16.23■□□□□ 0.19
SDHAP1-208ENST00000457601 EXOSC9Q06265 439 aaKnown RBP16.23■□□□□ 0.19
SDHAP1-208ENST00000457601 KRT24Q2M2I5 525 aa16.23■□□□□ 0.19
SDHAP1-208ENST00000457601 LY75O60449 1722 aa16.22■□□□□ 0.19
SDHAP1-208ENST00000457601 EIF4A1P60842 406 aaKnown RBP16.22■□□□□ 0.19
SDHAP1-208ENST00000457601 TTC5Q8N0Z6 440 aa16.22■□□□□ 0.19
SDHAP1-208ENST00000457601 ASAP1Q9ULH1 1129 aa16.22■□□□□ 0.19
SDHAP1-208ENST00000457601 HEG1Q9ULI3 1381 aa16.22■□□□□ 0.19
SDHAP1-208ENST00000457601 ZNF831Q5JPB2 1677 aa16.21■□□□□ 0.19
SDHAP1-208ENST00000457601 ATG3Q9NT62 314 aa16.21■□□□□ 0.19
SDHAP1-208ENST00000457601 PALLDQ8WX93 1383 aa16.21■□□□□ 0.19
SDHAP1-208ENST00000457601 TSPYL6Q8N831 410 aa16.2■□□□□ 0.18
SDHAP1-208ENST00000457601 C8orf58Q8NAV2 365 aa16.2■□□□□ 0.18
SDHAP1-208ENST00000457601 ZNF496Q96IT1 587 aaPredicted RBP16.2■□□□□ 0.18
SDHAP1-208ENST00000457601 RGPD3A6NKT7 1758 aaPredicted RBP16.19■□□□□ 0.18
SDHAP1-208ENST00000457601 RGPD4Q7Z3J3 1758 aa16.19■□□□□ 0.18
SDHAP1-208ENST00000457601 TRIM37O94972 964 aa16.19■□□□□ 0.18
SDHAP1-208ENST00000457601 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
SDHAP1-208ENST00000457601 BCL11BQ9C0K0 894 aaPredicted RBP16.19■□□□□ 0.18
SDHAP1-208ENST00000457601 COL5A3P25940 1745 aaPredicted RBP16.19■□□□□ 0.18
SDHAP1-208ENST00000457601 CENPBP07199 599 aaPredicted RBP16.18■□□□□ 0.18
SDHAP1-208ENST00000457601 TWISTNBQ3B726 338 aaPredicted RBP16.18■□□□□ 0.18
SDHAP1-208ENST00000457601 ELL2O00472 640 aaPredicted RBP16.17■□□□□ 0.18
SDHAP1-208ENST00000457601 PTCD1O75127 700 aaKnown RBP16.17■□□□□ 0.18
SDHAP1-208ENST00000457601 PRAMEF22A3QJZ6 481 aa16.16■□□□□ 0.18
SDHAP1-208ENST00000457601 GIGYF1O75420 1035 aaPredicted RBP16.16■□□□□ 0.18
SDHAP1-208ENST00000457601 CT47B1P0C2W7 299 aaPredicted RBP16.16■□□□□ 0.18
SDHAP1-208ENST00000457601 SMARCC1Q92922 1105 aaPredicted RBP16.16■□□□□ 0.18
SDHAP1-208ENST00000457601 SOS1Q07889 1333 aaPredicted RBP16.16■□□□□ 0.18
SDHAP1-208ENST00000457601 RREB1Q92766 1687 aa16.15■□□□□ 0.18
SDHAP1-208ENST00000457601 TAF1LQ8IZX4 1826 aa16.15■□□□□ 0.18
SDHAP1-208ENST00000457601 VAMP4O75379 141 aa16.15■□□□□ 0.18
SDHAP1-208ENST00000457601 HOXB7P09629 217 aa16.15■□□□□ 0.18
SDHAP1-208ENST00000457601 SLC4A9Q96Q91 983 aa16.15■□□□□ 0.18
SDHAP1-208ENST00000457601 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
SDHAP1-208ENST00000457601 LOC102724428A0A0B4J2F2 783 aa16.13■□□□□ 0.17
SDHAP1-208ENST00000457601 SNRPA1P09661 255 aaKnown RBP16.13■□□□□ 0.17
SDHAP1-208ENST00000457601 SIK1P57059 783 aa16.13■□□□□ 0.17
SDHAP1-208ENST00000457601 DEFB132Q7Z7B7 95 aa16.13■□□□□ 0.17
SDHAP1-208ENST00000457601 VSIG10Q8N0Z9 540 aa16.13■□□□□ 0.17
SDHAP1-208ENST00000457601 RARSP54136 660 aaKnown RBP16.12■□□□□ 0.17
SDHAP1-208ENST00000457601 CCDC125Q86Z20 511 aa16.12■□□□□ 0.17
SDHAP1-208ENST00000457601 RCAN3Q9UKA8 241 aa16.12■□□□□ 0.17
SDHAP1-208ENST00000457601 HDGFL1Q5TGJ6 251 aa16.11■□□□□ 0.17
SDHAP1-208ENST00000457601 DNAJC10Q8IXB1 793 aa16.11■□□□□ 0.17
SDHAP1-208ENST00000457601 NECTIN2Q92692 538 aa16.11■□□□□ 0.17
SDHAP1-208ENST00000457601 ZNF428Q96B54 188 aa16.11■□□□□ 0.17
SDHAP1-208ENST00000457601 CACNA1FO60840 1977 aa16.1■□□□□ 0.17
SDHAP1-208ENST00000457601 TCERG1O14776 1098 aaKnown RBP16.1■□□□□ 0.17
SDHAP1-208ENST00000457601 EIF2S2P20042 333 aaKnown RBP16.1■□□□□ 0.17
SDHAP1-208ENST00000457601 ITPK1Q13572 414 aa16.1■□□□□ 0.17
SDHAP1-208ENST00000457601 SSH1Q8WYL5 1049 aa16.1■□□□□ 0.17
SDHAP1-208ENST00000457601 BCL2L13Q9BXK5 485 aa16.1■□□□□ 0.17
SDHAP1-208ENST00000457601 USP16Q9Y5T5 823 aa16.1■□□□□ 0.17
SDHAP1-208ENST00000457601 C4BP0C0L5 1744 aa16.1■□□□□ 0.17
SDHAP1-208ENST00000457601 APBA3O96018 575 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms