RNA–Protein interactions for RNA: ENST00000456378.1

UBP1-205, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-205ENST00000456378 SCN11AQ9UI33 1791 aa31.86■■■□□ 2.69
UBP1-205ENST00000456378 SLC4A9Q96Q91 983 aa31.86■■■□□ 2.69
UBP1-205ENST00000456378 C4BP0C0L5 1744 aa31.86■■■□□ 2.69
UBP1-205ENST00000456378 ATP6V1AP38606 617 aa31.85■■■□□ 2.69
UBP1-205ENST00000456378 SLC16A10Q8TF71 515 aa31.85■■■□□ 2.69
UBP1-205ENST00000456378 RNMTO43148 476 aaKnown RBP31.84■■■□□ 2.69
UBP1-205ENST00000456378 AMIGO3Q86WK7 504 aa31.84■■■□□ 2.69
UBP1-205ENST00000456378 RSPH6AQ9H0K4 717 aa31.84■■■□□ 2.69
UBP1-205ENST00000456378 HMGB2P26583 209 aaKnown RBP31.83■■■□□ 2.69
UBP1-205ENST00000456378 NUDCQ9Y266 331 aa31.83■■■□□ 2.69
UBP1-205ENST00000456378 PHACTR3Q96KR7 559 aa31.82■■■□□ 2.68
UBP1-205ENST00000456378 RBM42Q9BTD8 480 aaKnown RBP31.82■■■□□ 2.68
UBP1-205ENST00000456378 PRKAR2BP31323 418 aa31.81■■■□□ 2.68
UBP1-205ENST00000456378 SMIM5Q71RC9 77 aa31.81■■■□□ 2.68
UBP1-205ENST00000456378 U2AF1L5P0DN76 240 aaPredicted RBP31.8■■■□□ 2.68
UBP1-205ENST00000456378 U2AF1Q01081 240 aaKnown RBP eCLIP31.8■■■□□ 2.68
UBP1-205ENST00000456378 AK7Q96M32 723 aa31.8■■■□□ 2.68
UBP1-205ENST00000456378 SLC52A2Q9HAB3 445 aa31.8■■■□□ 2.68
UBP1-205ENST00000456378 ZEB1P37275 1124 aaPredicted RBP31.79■■■□□ 2.68
UBP1-205ENST00000456378 ADAMTS7Q9UKP4 1686 aa31.79■■■□□ 2.68
UBP1-205ENST00000456378 MSH5O43196 834 aa31.78■■■□□ 2.68
UBP1-205ENST00000456378 COL24A1Q17RW2 1714 aa31.77■■■□□ 2.68
UBP1-205ENST00000456378 MRC1P22897 1456 aa31.77■■■□□ 2.68
UBP1-205ENST00000456378 PTCD1O75127 700 aaKnown RBP31.76■■■□□ 2.67
UBP1-205ENST00000456378 GAS2L2Q8NHY3 880 aa31.76■■■□□ 2.67
UBP1-205ENST00000456378 VIRMAQ69YN4 1812 aaKnown RBP31.76■■■□□ 2.67
UBP1-205ENST00000456378 ZNF831Q5JPB2 1677 aa31.76■■■□□ 2.67
UBP1-205ENST00000456378 UBR3Q6ZT12 1888 aa31.76■■■□□ 2.67
UBP1-205ENST00000456378 FLAD1Q8NFF5 587 aa31.75■■■□□ 2.67
UBP1-205ENST00000456378 ARXQ96QS3 562 aa31.75■■■□□ 2.67
UBP1-205ENST00000456378 MAP3K5Q99683 1374 aa31.74■■■□□ 2.67
UBP1-205ENST00000456378 FCHSD2O94868 740 aa31.74■■■□□ 2.67
UBP1-205ENST00000456378 IL17REQ8NFR9 667 aa31.74■■■□□ 2.67
UBP1-205ENST00000456378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.73■■■□□ 2.67
UBP1-205ENST00000456378 GNAT3A8MTJ3 354 aa31.73■■■□□ 2.67
UBP1-205ENST00000456378 PHF14O94880 888 aa31.73■■■□□ 2.67
UBP1-205ENST00000456378 RALBP1Q15311 655 aa31.73■■■□□ 2.67
UBP1-205ENST00000456378 FHDC1Q9C0D6 1143 aaPredicted RBP31.73■■■□□ 2.67
UBP1-205ENST00000456378 GNPATO15228 680 aa31.72■■■□□ 2.67
UBP1-205ENST00000456378 SLC39A6Q13433 755 aa31.71■■■□□ 2.67
UBP1-205ENST00000456378 SSFA2P28290 1259 aa31.7■■■□□ 2.67
UBP1-205ENST00000456378 MSL1Q68DK7 614 aa31.7■■■□□ 2.67
UBP1-205ENST00000456378 SYT17Q9BSW7 474 aa31.7■■■□□ 2.67
UBP1-205ENST00000456378 POLD1P28340 1107 aa31.69■■■□□ 2.66
UBP1-205ENST00000456378 COL5A3P25940 1745 aaPredicted RBP31.69■■■□□ 2.66
UBP1-205ENST00000456378 RC3H1Q5TC82 1133 aaKnown RBP31.68■■■□□ 2.66
UBP1-205ENST00000456378 CNTNAP4Q9C0A0 1308 aa31.66■■■□□ 2.66
UBP1-205ENST00000456378 TJP1Q07157 1748 aa31.65■■■□□ 2.66
UBP1-205ENST00000456378 CEMIPQ8WUJ3 1361 aa31.64■■■□□ 2.66
UBP1-205ENST00000456378 KCPQ6ZWJ8 1503 aa31.64■■■□□ 2.66
UBP1-205ENST00000456378 MYH14Q7Z406 1995 aaKnown RBP31.63■■■□□ 2.65
UBP1-205ENST00000456378 TEFQ10587 303 aa31.62■■■□□ 2.65
UBP1-205ENST00000456378 CICQ96RK0 1608 aaPredicted RBP31.62■■■□□ 2.65
UBP1-205ENST00000456378 RTCBQ9Y3I0 505 aaKnown RBP31.62■■■□□ 2.65
UBP1-205ENST00000456378 RPS6KA4O75676 772 aa31.61■■■□□ 2.65
UBP1-205ENST00000456378 CRKLP46109 303 aaKnown RBP31.61■■■□□ 2.65
UBP1-205ENST00000456378 DNAJC10Q8IXB1 793 aa31.61■■■□□ 2.65
UBP1-205ENST00000456378 PLEKHF1Q96S99 279 aa31.61■■■□□ 2.65
UBP1-205ENST00000456378 MYBBP1AQ9BQG0 1328 aaKnown RBP31.6■■■□□ 2.65
UBP1-205ENST00000456378 SIPA1L3O60292 1781 aaPredicted RBP31.6■■■□□ 2.65
UBP1-205ENST00000456378 TRAPPC3LQ5T215 181 aa31.59■■■□□ 2.65
UBP1-205ENST00000456378 INTS5Q6P9B9 1019 aaKnown RBP31.58■■■□□ 2.65
UBP1-205ENST00000456378 ARHGEF1Q92888 912 aaKnown RBP31.58■■■□□ 2.65
UBP1-205ENST00000456378 MCM10Q7L590 875 aa31.57■■■□□ 2.64
UBP1-205ENST00000456378 UBR2Q8IWV8 1755 aa31.57■■■□□ 2.64
UBP1-205ENST00000456378 KLHL34Q8N239 644 aa31.56■■■□□ 2.64
UBP1-205ENST00000456378 CYP19A1P11511 503 aaPredicted RBP31.55■■■□□ 2.64
UBP1-205ENST00000456378 ADRA2BP18089 450 aa31.55■■■□□ 2.64
UBP1-205ENST00000456378 DCTN1Q14203 1278 aa31.55■■■□□ 2.64
UBP1-205ENST00000456378 ZNF790Q6PG37 636 aa31.55■■■□□ 2.64
UBP1-205ENST00000456378 TTC5Q8N0Z6 440 aa31.54■■■□□ 2.64
UBP1-205ENST00000456378 VSIG10Q8N0Z9 540 aa31.54■■■□□ 2.64
UBP1-205ENST00000456378 RTF1Q92541 710 aaKnown RBP31.54■■■□□ 2.64
UBP1-205ENST00000456378 ZNF496Q96IT1 587 aaPredicted RBP31.54■■■□□ 2.64
UBP1-205ENST00000456378 PRKRIP1Q9H875 184 aaPredicted RBP31.54■■■□□ 2.64
UBP1-205ENST00000456378 KCNQ3O43525 872 aa31.53■■■□□ 2.64
UBP1-205ENST00000456378 HTATSF1O43719 755 aaKnown RBP31.53■■■□□ 2.64
UBP1-205ENST00000456378 CCDC87Q9NVE4 849 aa31.52■■■□□ 2.64
UBP1-205ENST00000456378 BTBD11A6QL63 1104 aa31.51■■■□□ 2.63
UBP1-205ENST00000456378 NLGN2Q8NFZ4 835 aa31.51■■■□□ 2.63
UBP1-205ENST00000456378 RFC4P35249 363 aa31.5■■■□□ 2.63
UBP1-205ENST00000456378 HEG1Q9ULI3 1381 aa31.48■■■□□ 2.63
UBP1-205ENST00000456378 NEFMP07197 916 aa31.48■■■□□ 2.63
UBP1-205ENST00000456378 GYS1P13807 737 aa31.48■■■□□ 2.63
UBP1-205ENST00000456378 NFE2L2Q16236 605 aa31.48■■■□□ 2.63
UBP1-205ENST00000456378 C4AP0C0L4 1744 aa31.48■■■□□ 2.63
UBP1-205ENST00000456378 DCAF8L1A6NGE4 600 aa31.47■■■□□ 2.63
UBP1-205ENST00000456378 PNNQ9H307 717 aaKnown RBP31.47■■■□□ 2.63
UBP1-205ENST00000456378 DLG5Q8TDM6 1919 aa31.46■■■□□ 2.63
UBP1-205ENST00000456378 SRP68Q9UHB9 627 aaKnown RBP31.46■■■□□ 2.63
UBP1-205ENST00000456378 ZBTB1Q9Y2K1 713 aa31.46■■■□□ 2.63
UBP1-205ENST00000456378 SOS1Q07889 1333 aaPredicted RBP31.46■■■□□ 2.63
UBP1-205ENST00000456378 ZNF316A6NFI3 1004 aaPredicted RBP31.45■■■□□ 2.63
UBP1-205ENST00000456378 NLGN1Q8N2Q7 840 aa31.45■■■□□ 2.63
UBP1-205ENST00000456378 FMNL2Q96PY5 1086 aa31.45■■■□□ 2.63
UBP1-205ENST00000456378 MMP10P09238 476 aa31.44■■■□□ 2.62
UBP1-205ENST00000456378 CD2APQ9Y5K6 639 aa31.44■■■□□ 2.62
UBP1-205ENST00000456378 MAPK8IP3Q9UPT6 1336 aa31.43■■■□□ 2.62
UBP1-205ENST00000456378 USP42Q9H9J4 1324 aaKnown RBP31.42■■■□□ 2.62
UBP1-205ENST00000456378 STARD3NLO95772 234 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms