RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 ERVV-2B6SEH9 535 aa9.56□□□□□ -0.88
ERCC3-204ENST00000456257 ELL2O00472 640 aaPredicted RBP9.56□□□□□ -0.88
ERCC3-204ENST00000456257 CCDC30Q5VVM6 783 aa9.56□□□□□ -0.88
ERCC3-204ENST00000456257 MPRIPQ6WCQ1 1025 aa9.56□□□□□ -0.88
ERCC3-204ENST00000456257 ZCRB1Q8TBF4 217 aaKnown RBP9.56□□□□□ -0.88
ERCC3-204ENST00000456257 SLC52A2Q9HAB3 445 aa9.56□□□□□ -0.88
ERCC3-204ENST00000456257 ABCA3Q99758 1704 aa9.56□□□□□ -0.88
ERCC3-204ENST00000456257 GIGYF1O75420 1035 aaPredicted RBP9.55□□□□□ -0.88
ERCC3-204ENST00000456257 CSB-PGBD3P0DP91 1061 aa9.55□□□□□ -0.88
ERCC3-204ENST00000456257 IL2RBP14784 551 aa9.55□□□□□ -0.88
ERCC3-204ENST00000456257 TEFQ10587 303 aa9.55□□□□□ -0.88
ERCC3-204ENST00000456257 HDAC1Q13547 482 aaPredicted RBP9.55□□□□□ -0.88
ERCC3-204ENST00000456257 LARP1Q6PKG0 1096 aaKnown RBP9.55□□□□□ -0.88
ERCC3-204ENST00000456257 PCDHB15Q9Y5E8 787 aa9.55□□□□□ -0.88
ERCC3-204ENST00000456257 COL16A1Q07092 1604 aaPredicted RBP9.55□□□□□ -0.88
ERCC3-204ENST00000456257 DISP2A7MBM2 1401 aa9.55□□□□□ -0.88
ERCC3-204ENST00000456257 RGS12O14924 1447 aa9.55□□□□□ -0.88
ERCC3-204ENST00000456257 KDM6AO15550 1401 aaPredicted RBP9.55□□□□□ -0.88
ERCC3-204ENST00000456257 MRC1P22897 1456 aa9.54□□□□□ -0.88
ERCC3-204ENST00000456257 IBTKQ9P2D0 1353 aaPredicted RBP9.54□□□□□ -0.88
ERCC3-204ENST00000456257 BTBD11A6QL63 1104 aa9.54□□□□□ -0.88
ERCC3-204ENST00000456257 IGHDP01880 384 aa9.54□□□□□ -0.88
ERCC3-204ENST00000456257 SLC4A2P04920 1241 aa9.54□□□□□ -0.88
ERCC3-204ENST00000456257 EVA1CP58658 441 aa9.54□□□□□ -0.88
ERCC3-204ENST00000456257 TOM1L2Q6ZVM7 507 aa9.54□□□□□ -0.88
ERCC3-204ENST00000456257 TMEM57Q8N5G2 664 aa9.54□□□□□ -0.88
ERCC3-204ENST00000456257 CERKQ8TCT0 537 aa9.54□□□□□ -0.88
ERCC3-204ENST00000456257 THRAP3Q9Y2W1 955 aaKnown RBP9.54□□□□□ -0.88
ERCC3-204ENST00000456257 PKD1L3Q7Z443 1732 aa9.53□□□□□ -0.88
ERCC3-204ENST00000456257 KCNQ3O43525 872 aa9.53□□□□□ -0.88
ERCC3-204ENST00000456257 CANXP27824 592 aaKnown RBP9.53□□□□□ -0.88
ERCC3-204ENST00000456257 ZNF790Q6PG37 636 aa9.53□□□□□ -0.88
ERCC3-204ENST00000456257 CDCA7Q9BWT1 371 aaPredicted RBP9.53□□□□□ -0.88
ERCC3-204ENST00000456257 BTG4Q9NY30 223 aa9.53□□□□□ -0.88
ERCC3-204ENST00000456257 COL14A1Q05707 1796 aaKnown RBP9.52□□□□□ -0.88
ERCC3-204ENST00000456257 UBAP1LF5GYI3 381 aa9.52□□□□□ -0.89
ERCC3-204ENST00000456257 TCERG1O14776 1098 aaKnown RBP9.52□□□□□ -0.89
ERCC3-204ENST00000456257 PLEKHG5O94827 1062 aa9.52□□□□□ -0.89
ERCC3-204ENST00000456257 FTSJ3Q8IY81 847 aaKnown RBP9.52□□□□□ -0.89
ERCC3-204ENST00000456257 NFATC2IPQ8NCF5 419 aa9.52□□□□□ -0.89
ERCC3-204ENST00000456257 CNKSR2Q8WXI2 1034 aa9.52□□□□□ -0.89
ERCC3-204ENST00000456257 PCDH11XQ9BZA7 1347 aa9.52□□□□□ -0.89
ERCC3-204ENST00000456257 PCDH11YQ9BZA8 1340 aa9.52□□□□□ -0.89
ERCC3-204ENST00000456257 SIPA1L3O60292 1781 aaPredicted RBP9.51□□□□□ -0.89
ERCC3-204ENST00000456257 BARGINQ6ZT62 677 aa9.51□□□□□ -0.89
ERCC3-204ENST00000456257 G2E3Q7L622 706 aa9.51□□□□□ -0.89
ERCC3-204ENST00000456257 SMC5Q8IY18 1101 aa9.51□□□□□ -0.89
ERCC3-204ENST00000456257 FNBP4Q8N3X1 1017 aaPredicted RBP9.51□□□□□ -0.89
ERCC3-204ENST00000456257 RWDD1Q9H446 243 aaPredicted RBP9.51□□□□□ -0.89
ERCC3-204ENST00000456257 TSHZ2Q9NRE2 1034 aa9.51□□□□□ -0.89
ERCC3-204ENST00000456257 SLIT2O94813 1529 aa9.51□□□□□ -0.89
ERCC3-204ENST00000456257 JCADQ9P266 1359 aa9.5□□□□□ -0.89
ERCC3-204ENST00000456257 KDM3BQ7LBC6 1761 aa9.5□□□□□ -0.89
ERCC3-204ENST00000456257 CACNA1FO60840 1977 aa9.5□□□□□ -0.89
ERCC3-204ENST00000456257 CCT4P50991 539 aaKnown RBP9.5□□□□□ -0.89
ERCC3-204ENST00000456257 FLIIQ13045 1269 aa9.5□□□□□ -0.89
ERCC3-204ENST00000456257 PDIA6Q15084 440 aa9.5□□□□□ -0.89
ERCC3-204ENST00000456257 LRP10Q7Z4F1 713 aa9.5□□□□□ -0.89
ERCC3-204ENST00000456257 STK31Q9BXU1 1019 aa9.5□□□□□ -0.89
ERCC3-204ENST00000456257 SPATA31A1Q5TZJ5 1347 aa9.5□□□□□ -0.89
ERCC3-204ENST00000456257 HDGFL1Q5TGJ6 251 aa9.49□□□□□ -0.89
ERCC3-204ENST00000456257 ITPRIPQ8IWB1 547 aa9.49□□□□□ -0.89
ERCC3-204ENST00000456257 DDX21Q9NR30 783 aaKnown RBP eCLIP9.49□□□□□ -0.89
ERCC3-204ENST00000456257 RNF216Q9NWF9 866 aaPredicted RBP9.49□□□□□ -0.89
ERCC3-204ENST00000456257 DBF4Q9UBU7 674 aaPredicted RBP9.49□□□□□ -0.89
ERCC3-204ENST00000456257 SCN11AQ9UI33 1791 aa9.49□□□□□ -0.89
ERCC3-204ENST00000456257 SPATA31A5Q5VU36 1347 aa9.49□□□□□ -0.89
ERCC3-204ENST00000456257 SPATA31A6Q5VVP1 1343 aa9.49□□□□□ -0.89
ERCC3-204ENST00000456257 SPATA31A7Q8IWB4 1347 aa9.49□□□□□ -0.89
ERCC3-204ENST00000456257 PHLPP1O60346 1717 aa9.48□□□□□ -0.89
ERCC3-204ENST00000456257 SNRPA1P09661 255 aaKnown RBP9.48□□□□□ -0.89
ERCC3-204ENST00000456257 CABP4P57796 275 aa9.48□□□□□ -0.89
ERCC3-204ENST00000456257 SIRT2Q8IXJ6 389 aa9.48□□□□□ -0.89
ERCC3-204ENST00000456257 ZNF496Q96IT1 587 aaPredicted RBP9.48□□□□□ -0.89
ERCC3-204ENST00000456257 STRN4Q9NRL3 753 aa9.48□□□□□ -0.89
ERCC3-204ENST00000456257 HYPKQ9NX55 129 aa9.48□□□□□ -0.89
ERCC3-204ENST00000456257 ERBB4Q15303 1308 aa9.48□□□□□ -0.89
ERCC3-204ENST00000456257 PARP4Q9UKK3 1724 aaKnown RBP9.48□□□□□ -0.89
ERCC3-204ENST00000456257 TNS2Q63HR2 1409 aa9.48□□□□□ -0.89
ERCC3-204ENST00000456257 PIP4K2BP78356 416 aa9.47□□□□□ -0.89
ERCC3-204ENST00000456257 UNC5CLQ8IV45 518 aa9.47□□□□□ -0.89
ERCC3-204ENST00000456257 RPAP2Q8IXW5 612 aaPredicted RBP9.47□□□□□ -0.89
ERCC3-204ENST00000456257 FMNL2Q96PY5 1086 aa9.47□□□□□ -0.89
ERCC3-204ENST00000456257 EXOC5O00471 708 aa9.46□□□□□ -0.9
ERCC3-204ENST00000456257 SLC39A6Q13433 755 aa9.46□□□□□ -0.9
ERCC3-204ENST00000456257 VPS72Q15906 364 aa9.46□□□□□ -0.9
ERCC3-204ENST00000456257 VSIG10Q8N0Z9 540 aa9.46□□□□□ -0.9
ERCC3-204ENST00000456257 ANKRD44Q8N8A2 993 aa9.46□□□□□ -0.9
ERCC3-204ENST00000456257 PXDNLA1KZ92 1463 aa9.46□□□□□ -0.9
ERCC3-204ENST00000456257 BCL9LQ86UU0 1499 aa9.46□□□□□ -0.9
ERCC3-204ENST00000456257 ONECUT3O60422 494 aaPredicted RBP9.45□□□□□ -0.9
ERCC3-204ENST00000456257 BEND3Q5T5X7 828 aa9.45□□□□□ -0.9
ERCC3-204ENST00000456257 KSR2Q6VAB6 950 aa9.45□□□□□ -0.9
ERCC3-204ENST00000456257 TEX13AQ9BXU3 409 aaPredicted RBP9.45□□□□□ -0.9
ERCC3-204ENST00000456257 USP44Q9H0E7 712 aa9.45□□□□□ -0.9
ERCC3-204ENST00000456257 DCTPP1Q9H773 170 aa9.45□□□□□ -0.9
ERCC3-204ENST00000456257 PHAXQ9H814 394 aaKnown RBP9.45□□□□□ -0.9
ERCC3-204ENST00000456257 CHPF2Q9P2E5 772 aa9.45□□□□□ -0.9
ERCC3-204ENST00000456257 USP16Q9Y5T5 823 aa9.45□□□□□ -0.9
ERCC3-204ENST00000456257 ATP10DQ9P241 1426 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms