RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 HSPA5P11021 654 aaKnown RBP23.02■■□□□ 1.28
TVP23A-202ENST00000456096 EIF4G2P78344 907 aaKnown RBP eCLIP23.02■■□□□ 1.28
TVP23A-202ENST00000456096 IGSF1Q8N6C5 1336 aa23.02■■□□□ 1.28
TVP23A-202ENST00000456096 WWC3Q9ULE0 1092 aa23■■□□□ 1.27
TVP23A-202ENST00000456096 PLEKHG2Q9H7P9 1386 aa23■■□□□ 1.27
TVP23A-202ENST00000456096 ERVV-2B6SEH9 535 aa22.99■■□□□ 1.27
TVP23A-202ENST00000456096 SLC4A9Q96Q91 983 aa22.99■■□□□ 1.27
TVP23A-202ENST00000456096 ATP10DQ9P241 1426 aa22.99■■□□□ 1.27
TVP23A-202ENST00000456096 PLEKHO1Q53GL0 409 aaPredicted RBP22.98■■□□□ 1.27
TVP23A-202ENST00000456096 DCAF5Q96JK2 942 aa22.98■■□□□ 1.27
TVP23A-202ENST00000456096 RBM42Q9BTD8 480 aaKnown RBP22.97■■□□□ 1.27
TVP23A-202ENST00000456096 KDRP35968 1356 aa22.97■■□□□ 1.27
TVP23A-202ENST00000456096 HSP90AB1P08238 724 aaKnown RBP22.96■■□□□ 1.27
TVP23A-202ENST00000456096 ZNF530Q6P9A1 599 aaPredicted RBP22.96■■□□□ 1.27
TVP23A-202ENST00000456096 MMP10P09238 476 aa22.95■■□□□ 1.26
TVP23A-202ENST00000456096 TRAPPC3LQ5T215 181 aa22.95■■□□□ 1.26
TVP23A-202ENST00000456096 MORC1Q86VD1 984 aa22.95■■□□□ 1.26
TVP23A-202ENST00000456096 RTCBQ9Y3I0 505 aaKnown RBP22.95■■□□□ 1.26
TVP23A-202ENST00000456096 AMOTQ4VCS5 1084 aa22.94■■□□□ 1.26
TVP23A-202ENST00000456096 AEBP1Q8IUX7 1158 aa22.94■■□□□ 1.26
TVP23A-202ENST00000456096 KDM6AO15550 1401 aaPredicted RBP22.93■■□□□ 1.26
TVP23A-202ENST00000456096 CABP4P57796 275 aa22.93■■□□□ 1.26
TVP23A-202ENST00000456096 ADCY9O60503 1353 aa22.92■■□□□ 1.26
TVP23A-202ENST00000456096 RC3H1Q5TC82 1133 aaKnown RBP22.92■■□□□ 1.26
TVP23A-202ENST00000456096 GPBP1L1Q9HC44 474 aaPredicted RBP22.92■■□□□ 1.26
TVP23A-202ENST00000456096 ZNF831Q5JPB2 1677 aa22.92■■□□□ 1.26
TVP23A-202ENST00000456096 MTHFSP49914 203 aa22.91■■□□□ 1.26
TVP23A-202ENST00000456096 ZNF526Q8TF50 670 aaPredicted RBP22.91■■□□□ 1.26
TVP23A-202ENST00000456096 ARHGEF1Q92888 912 aaKnown RBP22.91■■□□□ 1.26
TVP23A-202ENST00000456096 NLGN1Q8N2Q7 840 aa22.9■■□□□ 1.26
TVP23A-202ENST00000456096 COL5A3P25940 1745 aaPredicted RBP22.9■■□□□ 1.26
TVP23A-202ENST00000456096 CNTNAP4Q9C0A0 1308 aa22.89■■□□□ 1.26
TVP23A-202ENST00000456096 SULT6B1Q6IMI4 303 aa22.89■■□□□ 1.25
TVP23A-202ENST00000456096 RPS6KA4O75676 772 aa22.88■■□□□ 1.25
TVP23A-202ENST00000456096 ADRA2BP18089 450 aa22.88■■□□□ 1.25
TVP23A-202ENST00000456096 C1orf141Q5JVX7 400 aa22.88■■□□□ 1.25
TVP23A-202ENST00000456096 NFATC2IPQ8NCF5 419 aa22.88■■□□□ 1.25
TVP23A-202ENST00000456096 KNSTRNQ9Y448 316 aa22.88■■□□□ 1.25
TVP23A-202ENST00000456096 MYH14Q7Z406 1995 aaKnown RBP22.88■■□□□ 1.25
TVP23A-202ENST00000456096 KIF13BQ9NQT8 1826 aa22.87■■□□□ 1.25
TVP23A-202ENST00000456096 CICQ96RK0 1608 aaPredicted RBP22.87■■□□□ 1.25
TVP23A-202ENST00000456096 PTCD1O75127 700 aaKnown RBP22.87■■□□□ 1.25
TVP23A-202ENST00000456096 RFC4P35249 363 aa22.87■■□□□ 1.25
TVP23A-202ENST00000456096 PXDNLA1KZ92 1463 aa22.86■■□□□ 1.25
TVP23A-202ENST00000456096 A0A0G2JLW4 131 aa22.86■■□□□ 1.25
TVP23A-202ENST00000456096 GYS1P13807 737 aa22.86■■□□□ 1.25
TVP23A-202ENST00000456096 IL13P35225 146 aa22.86■■□□□ 1.25
TVP23A-202ENST00000456096 CCER1Q8TC90 406 aaPredicted RBP22.86■■□□□ 1.25
TVP23A-202ENST00000456096 N4BP2Q86UW6 1770 aaPredicted RBP22.86■■□□□ 1.25
TVP23A-202ENST00000456096 KIAA1551Q9HCM1 1747 aa22.85■■□□□ 1.25
TVP23A-202ENST00000456096 TGFB2P61812 414 aa22.85■■□□□ 1.25
TVP23A-202ENST00000456096 C10orf71Q711Q0 1435 aa22.83■■□□□ 1.25
TVP23A-202ENST00000456096 CCDC87Q9NVE4 849 aa22.83■■□□□ 1.25
TVP23A-202ENST00000456096 BCS1LQ9Y276 419 aa22.83■■□□□ 1.25
TVP23A-202ENST00000456096 C4AP0C0L4 1744 aa22.82■■□□□ 1.24
TVP23A-202ENST00000456096 CRKLP46109 303 aaKnown RBP22.82■■□□□ 1.24
TVP23A-202ENST00000456096 AMER1Q5JTC6 1135 aaPredicted RBP22.82■■□□□ 1.24
TVP23A-202ENST00000456096 PARP3Q9Y6F1 533 aa22.82■■□□□ 1.24
TVP23A-202ENST00000456096 DPEP1P16444 411 aa22.81■■□□□ 1.24
TVP23A-202ENST00000456096 SRP68Q9UHB9 627 aaKnown RBP22.8■■□□□ 1.24
TVP23A-202ENST00000456096 SCN11AQ9UI33 1791 aa22.8■■□□□ 1.24
TVP23A-202ENST00000456096 TJP1Q07157 1748 aa22.78■■□□□ 1.24
TVP23A-202ENST00000456096 AKAP4Q5JQC9 854 aa22.78■■□□□ 1.24
TVP23A-202ENST00000456096 ARHGAP27Q6ZUM4 889 aa22.78■■□□□ 1.24
TVP23A-202ENST00000456096 FKBP8Q14318 412 aa22.77■■□□□ 1.24
TVP23A-202ENST00000456096 INTS5Q6P9B9 1019 aaKnown RBP22.77■■□□□ 1.24
TVP23A-202ENST00000456096 LGR6Q9HBX8 967 aa22.77■■□□□ 1.24
TVP23A-202ENST00000456096 KIF7Q2M1P5 1343 aa22.77■■□□□ 1.24
TVP23A-202ENST00000456096 USP42Q9H9J4 1324 aaKnown RBP22.77■■□□□ 1.24
TVP23A-202ENST00000456096 KIF3CO14782 793 aa22.76■■□□□ 1.23
TVP23A-202ENST00000456096 FCHSD2O94868 740 aa22.76■■□□□ 1.23
TVP23A-202ENST00000456096 HSPA6P17066 643 aa22.76■■□□□ 1.23
TVP23A-202ENST00000456096 KCNA3P22001 575 aa22.76■■□□□ 1.23
TVP23A-202ENST00000456096 BRCA1P38398 1863 aaKnown RBP22.75■■□□□ 1.23
TVP23A-202ENST00000456096 HMOX1P09601 288 aa22.75■■□□□ 1.23
TVP23A-202ENST00000456096 DDR1Q08345 913 aa22.75■■□□□ 1.23
TVP23A-202ENST00000456096 SLC52A2Q9HAB3 445 aa22.75■■□□□ 1.23
TVP23A-202ENST00000456096 DNAJC10Q8IXB1 793 aa22.74■■□□□ 1.23
TVP23A-202ENST00000456096 RNMTO43148 476 aaKnown RBP22.72■■□□□ 1.23
TVP23A-202ENST00000456096 SLC39A6Q13433 755 aa22.72■■□□□ 1.23
TVP23A-202ENST00000456096 PER1O15534 1290 aaPredicted RBP22.71■■□□□ 1.23
TVP23A-202ENST00000456096 PIM2Q9P1W9 311 aa22.71■■□□□ 1.23
TVP23A-202ENST00000456096 ADAMTS7Q9UKP4 1686 aa22.71■■□□□ 1.23
TVP23A-202ENST00000456096 TM4SF1P30408 202 aa22.7■■□□□ 1.22
TVP23A-202ENST00000456096 MTHFSDQ2M296 383 aaKnown RBP22.7■■□□□ 1.22
TVP23A-202ENST00000456096 VIRMAQ69YN4 1812 aaKnown RBP22.7■■□□□ 1.22
TVP23A-202ENST00000456096 ARFGEF1Q9Y6D6 1849 aa22.69■■□□□ 1.22
TVP23A-202ENST00000456096 SOS1Q07889 1333 aaPredicted RBP22.69■■□□□ 1.22
TVP23A-202ENST00000456096 DIAPH1O60610 1272 aaKnown RBP22.69■■□□□ 1.22
TVP23A-202ENST00000456096 ZPR1O75312 459 aa22.69■■□□□ 1.22
TVP23A-202ENST00000456096 CYP19A1P11511 503 aaPredicted RBP22.69■■□□□ 1.22
TVP23A-202ENST00000456096 CC2D1BQ5T0F9 858 aaKnown RBP22.69■■□□□ 1.22
TVP23A-202ENST00000456096 USPL1Q5W0Q7 1092 aa22.69■■□□□ 1.22
TVP23A-202ENST00000456096 MRC1P22897 1456 aa22.68■■□□□ 1.22
TVP23A-202ENST00000456096 POLRMTO00411 1230 aaKnown RBP22.68■■□□□ 1.22
TVP23A-202ENST00000456096 CHRNA5P30532 468 aa22.68■■□□□ 1.22
TVP23A-202ENST00000456096 DALRD3Q5D0E6 543 aaKnown RBP22.68■■□□□ 1.22
TVP23A-202ENST00000456096 C9orf131Q5VYM1 1079 aa22.67■■□□□ 1.22
TVP23A-202ENST00000456096 KCPQ6ZWJ8 1503 aa22.67■■□□□ 1.22
TVP23A-202ENST00000456096 NMRK2Q9NPI5 230 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms