RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 GBP4Q96PP9 640 aa15.07■□□□□ 0
SEMA4D-213ENST00000455551 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
SEMA4D-213ENST00000455551 XRCC6P12956 609 aaKnown RBP eCLIP15.07■□□□□ 0
SEMA4D-213ENST00000455551 EIF2S2P20042 333 aaKnown RBP15.07■□□□□ 0
SEMA4D-213ENST00000455551 PANK2Q9BZ23 570 aa15.07■□□□□ 0
SEMA4D-213ENST00000455551 LRRFIP2Q9Y608 721 aaKnown RBP15.07■□□□□ 0
SEMA4D-213ENST00000455551 NWD1Q149M9 1564 aa15.07■□□□□ 0
SEMA4D-213ENST00000455551 TRHP20396 242 aaPredicted RBP15.06■□□□□ 0
SEMA4D-213ENST00000455551 HDGFL1Q5TGJ6 251 aa15.06■□□□□ 0
SEMA4D-213ENST00000455551 PHAXQ9H814 394 aaKnown RBP15.06■□□□□ 0
SEMA4D-213ENST00000455551 AK9Q5TCS8 1911 aa15.06■□□□□ 0
SEMA4D-213ENST00000455551 MARF1Q9Y4F3 1742 aaKnown RBP15.05■□□□□ 0
SEMA4D-213ENST00000455551 GNAI3P08754 354 aa15.05■□□□□ -0
SEMA4D-213ENST00000455551 ESCO1Q5FWF5 840 aa15.05■□□□□ -0
SEMA4D-213ENST00000455551 XPCQ01831 940 aaPredicted RBP15.05■□□□□ -0
SEMA4D-213ENST00000455551 NBPF6Q5VWK0 638 aa15.05■□□□□ -0
SEMA4D-213ENST00000455551 NBPF4Q96M43 638 aa15.05■□□□□ -0
SEMA4D-213ENST00000455551 FSD2A1L4K1 749 aa15.04■□□□□ -0
SEMA4D-213ENST00000455551 LRRCC1Q9C099 1032 aa15.04■□□□□ -0
SEMA4D-213ENST00000455551 LGR6Q9HBX8 967 aa15.04■□□□□ -0
SEMA4D-213ENST00000455551 FAM208AQ9UK61 1670 aaKnown RBP15.04■□□□□ -0
SEMA4D-213ENST00000455551 ERC2O15083 957 aa15.04■□□□□ -0
SEMA4D-213ENST00000455551 LRRC59Q96AG4 307 aaKnown RBP15.04■□□□□ -0
SEMA4D-213ENST00000455551 LRRC37A3O60309 1634 aa15.04■□□□□ -0
SEMA4D-213ENST00000455551 REC8O95072 547 aa15.03■□□□□ -0
SEMA4D-213ENST00000455551 PSME1Q06323 249 aa15.03■□□□□ -0
SEMA4D-213ENST00000455551 TRIM6-TRIM34B2RNG4 842 aa15.03■□□□□ -0
SEMA4D-213ENST00000455551 PRKCSHP14314 528 aaPredicted RBP15.03■□□□□ -0
SEMA4D-213ENST00000455551 RILPL2Q969X0 211 aa15.03■□□□□ -0
SEMA4D-213ENST00000455551 ANXA1P04083 346 aa15.03■□□□□ -0
SEMA4D-213ENST00000455551 ATP8B2P98198 1209 aa15.03■□□□□ -0
SEMA4D-213ENST00000455551 IL1RAPL2Q9NP60 686 aa15.03■□□□□ -0
SEMA4D-213ENST00000455551 KCNQ3O43525 872 aa15.02■□□□□ -0
SEMA4D-213ENST00000455551 UBTFL1P0CB47 393 aaPredicted RBP15.02■□□□□ -0
SEMA4D-213ENST00000455551 MX1P20591 662 aa15.02■□□□□ -0
SEMA4D-213ENST00000455551 LMOD2Q6P5Q4 547 aa15.02■□□□□ -0
SEMA4D-213ENST00000455551 USP44Q9H0E7 712 aa15.02■□□□□ -0
SEMA4D-213ENST00000455551 IP6K1Q92551 441 aa15.01□□□□□ -0.01
SEMA4D-213ENST00000455551 PKP1Q13835 747 aa15.01□□□□□ -0.01
SEMA4D-213ENST00000455551 OSBPL3Q9H4L5 887 aa15.01□□□□□ -0.01
SEMA4D-213ENST00000455551 ANKLE2Q86XL3 938 aa15.01□□□□□ -0.01
SEMA4D-213ENST00000455551 LTN1O94822 1766 aa15□□□□□ -0.01
SEMA4D-213ENST00000455551 ST18O60284 1047 aa15□□□□□ -0.01
SEMA4D-213ENST00000455551 ZGPATQ8N5A5 531 aaKnown RBP15□□□□□ -0.01
SEMA4D-213ENST00000455551 MPRIPQ6WCQ1 1025 aa15□□□□□ -0.01
SEMA4D-213ENST00000455551 CHPF2Q9P2E5 772 aa15□□□□□ -0.01
SEMA4D-213ENST00000455551 IBTKQ9P2D0 1353 aaPredicted RBP14.99□□□□□ -0.01
SEMA4D-213ENST00000455551 SALL3Q9BXA9 1300 aa14.99□□□□□ -0.01
SEMA4D-213ENST00000455551 ZNF530Q6P9A1 599 aaPredicted RBP14.99□□□□□ -0.01
SEMA4D-213ENST00000455551 NUTM1Q86Y26 1132 aa14.99□□□□□ -0.01
SEMA4D-213ENST00000455551 UNC5CLQ8IV45 518 aa14.99□□□□□ -0.01
SEMA4D-213ENST00000455551 BAG4O95429 457 aaKnown RBP14.99□□□□□ -0.01
SEMA4D-213ENST00000455551 MAP4K4O95819 1239 aaPredicted RBP14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 NOL8Q76FK4 1167 aaKnown RBP14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 ANO2Q9NQ90 1003 aa14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 EIF4A1P60842 406 aaKnown RBP14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 TEFQ10587 303 aa14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 PPP1R42Q7Z4L9 355 aa14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 FAM43AQ8N2R8 423 aa14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 ESYT1Q9BSJ8 1104 aa14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 SRCIN1Q9C0H9 1055 aa14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 GRPEL1Q9HAV7 217 aa14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 GOLGA6L22H0YM25 854 aa14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 SURF6O75683 361 aaKnown RBP14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 GAS2L3Q86XJ1 694 aa14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 ORAI2Q96SN7 254 aa14.98□□□□□ -0.01
SEMA4D-213ENST00000455551 NEK4P51957 841 aa14.97□□□□□ -0.01
SEMA4D-213ENST00000455551 MCTP1Q6DN14 999 aa14.97□□□□□ -0.01
SEMA4D-213ENST00000455551 PI4KAP2A4QPH2 592 aa14.97□□□□□ -0.01
SEMA4D-213ENST00000455551 NBPF7P0C2Y1 421 aaPredicted RBP14.97□□□□□ -0.01
SEMA4D-213ENST00000455551 MRE11P49959 708 aa14.97□□□□□ -0.01
SEMA4D-213ENST00000455551 PI4KAP1Q8N8J0 262 aa14.97□□□□□ -0.01
SEMA4D-213ENST00000455551 FOXD4L5Q5VV16 416 aaPredicted RBP14.96□□□□□ -0.01
SEMA4D-213ENST00000455551 FOXD4L4Q8WXT5 416 aaPredicted RBP14.96□□□□□ -0.01
SEMA4D-213ENST00000455551 BABAM1Q9NWV8 329 aa14.96□□□□□ -0.01
SEMA4D-213ENST00000455551 PALD1Q9ULE6 856 aa14.96□□□□□ -0.01
SEMA4D-213ENST00000455551 BTBD11A6QL63 1104 aa14.96□□□□□ -0.01
SEMA4D-213ENST00000455551 RRAGDQ9NQL2 400 aaPredicted RBP14.96□□□□□ -0.01
SEMA4D-213ENST00000455551 CEMIPQ8WUJ3 1361 aa14.96□□□□□ -0.01
SEMA4D-213ENST00000455551 SRGAP3O43295 1099 aa14.96□□□□□ -0.01
SEMA4D-213ENST00000455551 CHMLP26374 656 aa14.96□□□□□ -0.01
SEMA4D-213ENST00000455551 DDX49Q9Y6V7 483 aaKnown RBP14.96□□□□□ -0.01
SEMA4D-213ENST00000455551 CACNA1FO60840 1977 aa14.96□□□□□ -0.02
SEMA4D-213ENST00000455551 SOS1Q07889 1333 aaPredicted RBP14.96□□□□□ -0.02
SEMA4D-213ENST00000455551 RGPD2P0DJD1 1756 aa14.96□□□□□ -0.02
SEMA4D-213ENST00000455551 SKOR2Q2VWA4 1001 aaPredicted RBP14.95□□□□□ -0.02
SEMA4D-213ENST00000455551 CHAMP1Q96JM3 812 aa14.95□□□□□ -0.02
SEMA4D-213ENST00000455551 NFAT5O94916 1531 aa14.95□□□□□ -0.02
SEMA4D-213ENST00000455551 NCLP19338 710 aaKnown RBP14.94□□□□□ -0.02
SEMA4D-213ENST00000455551 NUCB2P80303 420 aa14.94□□□□□ -0.02
SEMA4D-213ENST00000455551 KCNH5Q8NCM2 988 aa14.94□□□□□ -0.02
SEMA4D-213ENST00000455551 SSH3Q8TE77 659 aa14.94□□□□□ -0.02
SEMA4D-213ENST00000455551 DNAAF4Q8WXU2 420 aa14.94□□□□□ -0.02
SEMA4D-213ENST00000455551 IL25Q9H293 177 aa14.94□□□□□ -0.02
SEMA4D-213ENST00000455551 CHD2O14647 1828 aaKnown RBP14.94□□□□□ -0.02
SEMA4D-213ENST00000455551 USP54Q70EL1 1684 aa14.94□□□□□ -0.02
SEMA4D-213ENST00000455551 GCP02774 474 aa14.94□□□□□ -0.02
SEMA4D-213ENST00000455551 PLEKHO1Q53GL0 409 aaPredicted RBP14.93□□□□□ -0.02
SEMA4D-213ENST00000455551 PXDNLA1KZ92 1463 aa14.93□□□□□ -0.02
SEMA4D-213ENST00000455551 ADGRL3Q9HAR2 1447 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms