RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 MSL1Q68DK7 614 aa11.09□□□□□ -0.63
NIF3L1-209ENST00000454952 YBX3P16989 372 aaKnown RBP eCLIP11.08□□□□□ -0.644e-6■□□□□ 11.2
NIF3L1-209ENST00000454952 SSFA2P28290 1259 aa11.08□□□□□ -0.64
NIF3L1-209ENST00000454952 CARD14Q9BXL6 1004 aa11.08□□□□□ -0.64
NIF3L1-209ENST00000454952 TMOD3Q9NYL9 352 aa11.08□□□□□ -0.64
NIF3L1-209ENST00000454952 EMILIN1Q9Y6C2 1016 aa11.08□□□□□ -0.64
NIF3L1-209ENST00000454952 LOC102724428A0A0B4J2F2 783 aa11.07□□□□□ -0.64
NIF3L1-209ENST00000454952 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
NIF3L1-209ENST00000454952 SIK1P57059 783 aa11.07□□□□□ -0.64
NIF3L1-209ENST00000454952 IFNL2Q8IZJ0 200 aa11.07□□□□□ -0.64
NIF3L1-209ENST00000454952 PIGBQ92521 554 aa11.07□□□□□ -0.64
NIF3L1-209ENST00000454952 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
NIF3L1-209ENST00000454952 CLSPNQ9HAW4 1339 aa11.07□□□□□ -0.64
NIF3L1-209ENST00000454952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.06□□□□□ -0.64
NIF3L1-209ENST00000454952 PHF14O94880 888 aa11.05□□□□□ -0.64
NIF3L1-209ENST00000454952 HSP90AB1P08238 724 aaKnown RBP11.05□□□□□ -0.64
NIF3L1-209ENST00000454952 AMER1Q5JTC6 1135 aaPredicted RBP11.05□□□□□ -0.64
NIF3L1-209ENST00000454952 EYA1Q99502 592 aa11.05□□□□□ -0.64
NIF3L1-209ENST00000454952 ATP10DQ9P241 1426 aa11.04□□□□□ -0.64
NIF3L1-209ENST00000454952 PHKG2P15735 406 aa11.04□□□□□ -0.64
NIF3L1-209ENST00000454952 GPBP1L1Q9HC44 474 aaPredicted RBP11.04□□□□□ -0.64
NIF3L1-209ENST00000454952 POLKQ9UBT6 870 aa11.04□□□□□ -0.64
NIF3L1-209ENST00000454952 ZNF831Q5JPB2 1677 aa11.04□□□□□ -0.64
NIF3L1-209ENST00000454952 GNPATO15228 680 aa11.03□□□□□ -0.64
NIF3L1-209ENST00000454952 ATP6V1AP38606 617 aa11.03□□□□□ -0.64
NIF3L1-209ENST00000454952 IGSF1Q8N6C5 1336 aa11.03□□□□□ -0.64
NIF3L1-209ENST00000454952 ERVV-2B6SEH9 535 aa11.02□□□□□ -0.65
NIF3L1-209ENST00000454952 LINC00116Q8NCU8 138 aa11.02□□□□□ -0.65
NIF3L1-209ENST00000454952 KIF13BQ9NQT8 1826 aa11.01□□□□□ -0.65
NIF3L1-209ENST00000454952 EIF4A2Q14240 407 aaKnown RBP11.01□□□□□ -0.65
NIF3L1-209ENST00000454952 AMOTQ4VCS5 1084 aa11.01□□□□□ -0.65
NIF3L1-209ENST00000454952 PLEKHO1Q53GL0 409 aaPredicted RBP11.01□□□□□ -0.65
NIF3L1-209ENST00000454952 NLGN1Q8N2Q7 840 aa11.01□□□□□ -0.65
NIF3L1-209ENST00000454952 DCAF5Q96JK2 942 aa11.01□□□□□ -0.65
NIF3L1-209ENST00000454952 ASAP1Q9ULH1 1129 aa11.01□□□□□ -0.65
NIF3L1-209ENST00000454952 RTCBQ9Y3I0 505 aaKnown RBP11.01□□□□□ -0.65
NIF3L1-209ENST00000454952 ADCY9O60503 1353 aa11.01□□□□□ -0.65
NIF3L1-209ENST00000454952 TGFB2P61812 414 aa11□□□□□ -0.65
NIF3L1-209ENST00000454952 ITPK1Q13572 414 aa11□□□□□ -0.65
NIF3L1-209ENST00000454952 TRAPPC3LQ5T215 181 aa11□□□□□ -0.65
NIF3L1-209ENST00000454952 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
NIF3L1-209ENST00000454952 POLR3GLQ9BT43 218 aa11□□□□□ -0.65
NIF3L1-209ENST00000454952 ATG3Q9NT62 314 aa11□□□□□ -0.65
NIF3L1-209ENST00000454952 GOLGB1Q14789 3259 aaKnown RBP10.99□□□□□ -0.65
NIF3L1-209ENST00000454952 MMP10P09238 476 aa10.99□□□□□ -0.65
NIF3L1-209ENST00000454952 TNNT2P45379 298 aaPredicted RBP10.99□□□□□ -0.65
NIF3L1-209ENST00000454952 EIF4G2P78344 907 aaKnown RBP eCLIP10.99□□□□□ -0.65
NIF3L1-209ENST00000454952 AMIGO3Q86WK7 504 aa10.99□□□□□ -0.65
NIF3L1-209ENST00000454952 CNTNAP4Q9C0A0 1308 aa10.99□□□□□ -0.65
NIF3L1-209ENST00000454952 KDRP35968 1356 aa10.99□□□□□ -0.65
NIF3L1-209ENST00000454952 CICQ96RK0 1608 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-209ENST00000454952 COL5A3P25940 1745 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-209ENST00000454952 RFC4P35249 363 aa10.98□□□□□ -0.65
NIF3L1-209ENST00000454952 CABP4P57796 275 aa10.98□□□□□ -0.65
NIF3L1-209ENST00000454952 C1orf141Q5JVX7 400 aa10.98□□□□□ -0.65
NIF3L1-209ENST00000454952 CCDC87Q9NVE4 849 aa10.98□□□□□ -0.65
NIF3L1-209ENST00000454952 ZBTB12Q9Y330 459 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-209ENST00000454952 ZNF530Q6P9A1 599 aaPredicted RBP10.97□□□□□ -0.65
NIF3L1-209ENST00000454952 RBM42Q9BTD8 480 aaKnown RBP10.97□□□□□ -0.65
NIF3L1-209ENST00000454952 C4AP0C0L4 1744 aa10.96□□□□□ -0.65
NIF3L1-209ENST00000454952 RPS6KA4O75676 772 aa10.96□□□□□ -0.65
NIF3L1-209ENST00000454952 HSPA6P17066 643 aa10.96□□□□□ -0.65
NIF3L1-209ENST00000454952 MTHFSP49914 203 aa10.96□□□□□ -0.65
NIF3L1-209ENST00000454952 ZNF526Q8TF50 670 aaPredicted RBP10.96□□□□□ -0.65
NIF3L1-209ENST00000454952 PANK3Q9H999 370 aa10.96□□□□□ -0.65
NIF3L1-209ENST00000454952 PARP3Q9Y6F1 533 aa10.96□□□□□ -0.65
NIF3L1-209ENST00000454952 PXDNLA1KZ92 1463 aa10.95□□□□□ -0.66
NIF3L1-209ENST00000454952 C10orf71Q711Q0 1435 aa10.95□□□□□ -0.66
NIF3L1-209ENST00000454952 SMIM5Q71RC9 77 aa10.95□□□□□ -0.66
NIF3L1-209ENST00000454952 MORC1Q86VD1 984 aa10.95□□□□□ -0.66
NIF3L1-209ENST00000454952 ARHGEF1Q92888 912 aaKnown RBP10.95□□□□□ -0.66
NIF3L1-209ENST00000454952 N4BP2Q86UW6 1770 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-209ENST00000454952 CHRDL2Q6WN34 429 aa10.94□□□□□ -0.66
NIF3L1-209ENST00000454952 KNSTRNQ9Y448 316 aa10.94□□□□□ -0.66
NIF3L1-209ENST00000454952 MYH14Q7Z406 1995 aaKnown RBP10.94□□□□□ -0.66
NIF3L1-209ENST00000454952 BRCA1P38398 1863 aaKnown RBP10.93□□□□□ -0.66
NIF3L1-209ENST00000454952 KDM6AO15550 1401 aaPredicted RBP10.93□□□□□ -0.66
NIF3L1-209ENST00000454952 ARFGEF1Q9Y6D6 1849 aa10.93□□□□□ -0.66
NIF3L1-209ENST00000454952 SCN11AQ9UI33 1791 aa10.93□□□□□ -0.66
NIF3L1-209ENST00000454952 KIAA1551Q9HCM1 1747 aa10.93□□□□□ -0.66
NIF3L1-209ENST00000454952 GYS1P13807 737 aa10.93□□□□□ -0.66
NIF3L1-209ENST00000454952 PCGF6Q9BYE7 350 aa10.93□□□□□ -0.66
NIF3L1-209ENST00000454952 WWC3Q9ULE0 1092 aa10.93□□□□□ -0.66
NIF3L1-209ENST00000454952 BCS1LQ9Y276 419 aa10.93□□□□□ -0.66
NIF3L1-209ENST00000454952 A0A0G2JLW4 131 aa10.92□□□□□ -0.66
NIF3L1-209ENST00000454952 HSPA5P11021 654 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-209ENST00000454952 IFFO2Q5TF58 517 aa10.92□□□□□ -0.66
NIF3L1-209ENST00000454952 SULT6B1Q6IMI4 303 aa10.92□□□□□ -0.66
NIF3L1-209ENST00000454952 ARHGAP27Q6ZUM4 889 aa10.92□□□□□ -0.66
NIF3L1-209ENST00000454952 SLC4A9Q96Q91 983 aa10.92□□□□□ -0.66
NIF3L1-209ENST00000454952 KIF3CO14782 793 aa10.91□□□□□ -0.66
NIF3L1-209ENST00000454952 PTCD1O75127 700 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-209ENST00000454952 TOMM70O94826 608 aa10.91□□□□□ -0.66
NIF3L1-209ENST00000454952 FCHSD2O94868 740 aa10.91□□□□□ -0.66
NIF3L1-209ENST00000454952 DPEP1P16444 411 aa10.91□□□□□ -0.66
NIF3L1-209ENST00000454952 CRKLP46109 303 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-209ENST00000454952 APLP1P51693 650 aa10.91□□□□□ -0.66
NIF3L1-209ENST00000454952 AKAP4Q5JQC9 854 aa10.91□□□□□ -0.66
NIF3L1-209ENST00000454952 NFATC2IPQ8NCF5 419 aa10.91□□□□□ -0.66
NIF3L1-209ENST00000454952 PIM2Q9P1W9 311 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms