RNA–Protein interactions for RNA: ENST00000454906.6

EXTL3-202, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-202ENST00000454906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.8□□□□□ -0.52
EXTL3-202ENST00000454906 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
EXTL3-202ENST00000454906 MRC1P22897 1456 aa11.79□□□□□ -0.52
EXTL3-202ENST00000454906 SENP3-EIF4A1A0A087X0R7 540 aa11.79□□□□□ -0.52
EXTL3-202ENST00000454906 PTCD1O75127 700 aaKnown RBP11.79□□□□□ -0.52
EXTL3-202ENST00000454906 NKX1-1Q15270 411 aaPredicted RBP11.79□□□□□ -0.52
EXTL3-202ENST00000454906 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
EXTL3-202ENST00000454906 DCAF5Q96JK2 942 aa11.79□□□□□ -0.52
EXTL3-202ENST00000454906 PHACTR3Q96KR7 559 aa11.79□□□□□ -0.52
EXTL3-202ENST00000454906 TFCP2L1Q9NZI6 479 aa11.79□□□□□ -0.52
EXTL3-202ENST00000454906 MYBBP1AQ9BQG0 1328 aaKnown RBP11.79□□□□□ -0.52
EXTL3-202ENST00000454906 KDM3BQ7LBC6 1761 aa11.78□□□□□ -0.52
EXTL3-202ENST00000454906 RNMTO43148 476 aaKnown RBP11.78□□□□□ -0.52
EXTL3-202ENST00000454906 HSP90AB1P08238 724 aaKnown RBP11.78□□□□□ -0.52
EXTL3-202ENST00000454906 ATP6V1AP38606 617 aa11.78□□□□□ -0.52
EXTL3-202ENST00000454906 SLC39A6Q13433 755 aa11.78□□□□□ -0.52
EXTL3-202ENST00000454906 AKAP4Q5JQC9 854 aa11.78□□□□□ -0.52
EXTL3-202ENST00000454906 MSL1Q68DK7 614 aa11.78□□□□□ -0.52
EXTL3-202ENST00000454906 CCDC146Q8IYE0 955 aa11.78□□□□□ -0.52
EXTL3-202ENST00000454906 NFATC2IPQ8NCF5 419 aa11.78□□□□□ -0.52
EXTL3-202ENST00000454906 ATG3Q9NT62 314 aa11.78□□□□□ -0.52
EXTL3-202ENST00000454906 PPP1R1BQ9UD71 204 aaPredicted RBP11.78□□□□□ -0.52
EXTL3-202ENST00000454906 ZNF831Q5JPB2 1677 aa11.78□□□□□ -0.52
EXTL3-202ENST00000454906 LOC102724428A0A0B4J2F2 783 aa11.77□□□□□ -0.53
EXTL3-202ENST00000454906 SIK1P57059 783 aa11.77□□□□□ -0.53
EXTL3-202ENST00000454906 DCTN1Q14203 1278 aa11.77□□□□□ -0.53
EXTL3-202ENST00000454906 SLC27A3Q5K4L6 730 aa11.77□□□□□ -0.53
EXTL3-202ENST00000454906 LINC00116Q8NCU8 138 aa11.77□□□□□ -0.53
EXTL3-202ENST00000454906 AK7Q96M32 723 aa11.77□□□□□ -0.53
EXTL3-202ENST00000454906 PNPLA7Q6ZV29 1317 aa11.77□□□□□ -0.53
EXTL3-202ENST00000454906 LAMB4A4D0S4 1761 aa11.77□□□□□ -0.53
EXTL3-202ENST00000454906 ITPK1Q13572 414 aa11.76□□□□□ -0.53
EXTL3-202ENST00000454906 RALBP1Q15311 655 aa11.76□□□□□ -0.53
EXTL3-202ENST00000454906 MCM10Q7L590 875 aa11.76□□□□□ -0.53
EXTL3-202ENST00000454906 SMARCC1Q92922 1105 aaPredicted RBP11.76□□□□□ -0.53
EXTL3-202ENST00000454906 COL24A1Q17RW2 1714 aa11.76□□□□□ -0.53
EXTL3-202ENST00000454906 CACNA1SQ13698 1873 aa11.76□□□□□ -0.53
EXTL3-202ENST00000454906 KCPQ6ZWJ8 1503 aa11.76□□□□□ -0.53
EXTL3-202ENST00000454906 ERVV-2B6SEH9 535 aa11.75□□□□□ -0.53
EXTL3-202ENST00000454906 AMIGO3Q86WK7 504 aa11.75□□□□□ -0.53
EXTL3-202ENST00000454906 GAS2L2Q8NHY3 880 aa11.75□□□□□ -0.53
EXTL3-202ENST00000454906 AKT1S1Q96B36 256 aa11.75□□□□□ -0.53
EXTL3-202ENST00000454906 PRKRIP1Q9H875 184 aaPredicted RBP11.75□□□□□ -0.53
EXTL3-202ENST00000454906 MAPK8IP3Q9UPT6 1336 aa11.75□□□□□ -0.53
EXTL3-202ENST00000454906 CICQ96RK0 1608 aaPredicted RBP11.75□□□□□ -0.53
EXTL3-202ENST00000454906 GNAT3A8MTJ3 354 aa11.74□□□□□ -0.53
EXTL3-202ENST00000454906 GNPATO15228 680 aa11.74□□□□□ -0.53
EXTL3-202ENST00000454906 NEFMP07197 916 aa11.74□□□□□ -0.53
EXTL3-202ENST00000454906 TEFQ10587 303 aa11.74□□□□□ -0.53
EXTL3-202ENST00000454906 SLC4A9Q96Q91 983 aa11.74□□□□□ -0.53
EXTL3-202ENST00000454906 SLC52A2Q9HAB3 445 aa11.74□□□□□ -0.53
EXTL3-202ENST00000454906 SPON1Q9HCB6 807 aa11.74□□□□□ -0.53
EXTL3-202ENST00000454906 RRP7AQ9Y3A4 280 aaKnown RBP11.74□□□□□ -0.53
EXTL3-202ENST00000454906 PLEKHG2Q9H7P9 1386 aa11.74□□□□□ -0.53
EXTL3-202ENST00000454906 N4BP2Q86UW6 1770 aaPredicted RBP11.74□□□□□ -0.53
EXTL3-202ENST00000454906 WDR43Q15061 677 aaKnown RBP eCLIP11.73□□□□□ -0.53
EXTL3-202ENST00000454906 NEUROD2Q15784 382 aa11.73□□□□□ -0.53
EXTL3-202ENST00000454906 COL23A1Q86Y22 540 aaPredicted RBP11.73□□□□□ -0.53
EXTL3-202ENST00000454906 MIER1Q8N108 512 aa11.73□□□□□ -0.53
EXTL3-202ENST00000454906 THUMPD2Q9BTF0 503 aaKnown RBP11.73□□□□□ -0.53
EXTL3-202ENST00000454906 AFDNP55196 1824 aaKnown RBP11.72□□□□□ -0.53
EXTL3-202ENST00000454906 CCDC184Q52MB2 194 aa11.72□□□□□ -0.53
EXTL3-202ENST00000454906 IL17REQ8NFR9 667 aa11.72□□□□□ -0.53
EXTL3-202ENST00000454906 RTF1Q92541 710 aaKnown RBP11.72□□□□□ -0.53
EXTL3-202ENST00000454906 KCNQ3O43525 872 aa11.71□□□□□ -0.53
EXTL3-202ENST00000454906 DNAJC10Q8IXB1 793 aa11.71□□□□□ -0.53
EXTL3-202ENST00000454906 TTC5Q8N0Z6 440 aa11.71□□□□□ -0.53
EXTL3-202ENST00000454906 ZNF330Q9Y3S2 320 aaPredicted RBP11.71□□□□□ -0.53
EXTL3-202ENST00000454906 BCORQ6W2J9 1755 aa11.7□□□□□ -0.54
EXTL3-202ENST00000454906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.7□□□□□ -0.54
EXTL3-202ENST00000454906 FCHSD2O94868 740 aa11.7□□□□□ -0.54
EXTL3-202ENST00000454906 MIS18AQ9NYP9 233 aa11.7□□□□□ -0.54
EXTL3-202ENST00000454906 SCN7AQ01118 1682 aa11.69□□□□□ -0.54
EXTL3-202ENST00000454906 PIP4K2AP48426 406 aaPredicted RBP11.69□□□□□ -0.54
EXTL3-202ENST00000454906 MTFR1LQ9H019 292 aa11.69□□□□□ -0.54
EXTL3-202ENST00000454906 WWC3Q9ULE0 1092 aa11.69□□□□□ -0.54
EXTL3-202ENST00000454906 CHD4Q14839 1912 aa11.68□□□□□ -0.54
EXTL3-202ENST00000454906 BTBD11A6QL63 1104 aa11.68□□□□□ -0.54
EXTL3-202ENST00000454906 ANP32CO43423 234 aa11.68□□□□□ -0.54
EXTL3-202ENST00000454906 PTGER2P43116 358 aa11.68□□□□□ -0.54
EXTL3-202ENST00000454906 CRKLP46109 303 aaKnown RBP11.68□□□□□ -0.54
EXTL3-202ENST00000454906 NFE2L2Q16236 605 aa11.68□□□□□ -0.54
EXTL3-202ENST00000454906 PLEKHF1Q96S99 279 aa11.68□□□□□ -0.54
EXTL3-202ENST00000454906 NUP98P52948 1817 aa11.67□□□□□ -0.54
EXTL3-202ENST00000454906 PRAMEF22A3QJZ6 481 aa11.67□□□□□ -0.54
EXTL3-202ENST00000454906 PELP1Q8IZL8 1130 aaKnown RBP11.67□□□□□ -0.54
EXTL3-202ENST00000454906 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
EXTL3-202ENST00000454906 CANXP27824 592 aaKnown RBP11.66□□□□□ -0.54
EXTL3-202ENST00000454906 POLD1P28340 1107 aa11.66□□□□□ -0.54
EXTL3-202ENST00000454906 ZNF496Q96IT1 587 aaPredicted RBP11.66□□□□□ -0.54
EXTL3-202ENST00000454906 ARXQ96QS3 562 aa11.66□□□□□ -0.54
EXTL3-202ENST00000454906 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
EXTL3-202ENST00000454906 MRS2Q9HD23 443 aa11.66□□□□□ -0.54
EXTL3-202ENST00000454906 SRP68Q9UHB9 627 aaKnown RBP11.66□□□□□ -0.54
EXTL3-202ENST00000454906 ADAMTS8Q9UP79 889 aa11.66□□□□□ -0.54
EXTL3-202ENST00000454906 RTCBQ9Y3I0 505 aaKnown RBP11.66□□□□□ -0.54
EXTL3-202ENST00000454906 LAS1LQ9Y4W2 734 aaKnown RBP11.66□□□□□ -0.54
EXTL3-202ENST00000454906 RIPK4P57078 832 aa11.65□□□□□ -0.54
EXTL3-202ENST00000454906 ZNF790Q6PG37 636 aa11.65□□□□□ -0.54
EXTL3-202ENST00000454906 ZBTB1Q9Y2K1 713 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms