RNA–Protein interactions for RNA: ENST00000454520.6

RACGAP1-203, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 3,080 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-203ENST00000454520 MIER1Q8N108 512 aa8.45□□□□□ -1.06
RACGAP1-203ENST00000454520 GOLGB1Q14789 3259 aaKnown RBP8.45□□□□□ -1.06
RACGAP1-203ENST00000454520 ERVV-2B6SEH9 535 aa8.45□□□□□ -1.06
RACGAP1-203ENST00000454520 PHF14O94880 888 aa8.45□□□□□ -1.06
RACGAP1-203ENST00000454520 TTC5Q8N0Z6 440 aa8.45□□□□□ -1.06
RACGAP1-203ENST00000454520 PDGFDQ9GZP0 370 aaPredicted RBP8.45□□□□□ -1.06
RACGAP1-203ENST00000454520 ATG3Q9NT62 314 aa8.45□□□□□ -1.06
RACGAP1-203ENST00000454520 COL3A1P02461 1466 aaPredicted RBP8.44□□□□□ -1.06
RACGAP1-203ENST00000454520 PALLDQ8WX93 1383 aa8.44□□□□□ -1.06
RACGAP1-203ENST00000454520 LOC102724428A0A0B4J2F2 783 aa8.44□□□□□ -1.06
RACGAP1-203ENST00000454520 SIK1P57059 783 aa8.44□□□□□ -1.06
RACGAP1-203ENST00000454520 SLC52A2Q9HAB3 445 aa8.44□□□□□ -1.06
RACGAP1-203ENST00000454520 ANO8Q9HCE9 1232 aaPredicted RBP8.44□□□□□ -1.06
RACGAP1-203ENST00000454520 STK32BQ9NY57 414 aa8.44□□□□□ -1.06
RACGAP1-203ENST00000454520 BTBD11A6QL63 1104 aa8.44□□□□□ -1.06
RACGAP1-203ENST00000454520 SMARCC1Q92922 1105 aaPredicted RBP8.43□□□□□ -1.06
RACGAP1-203ENST00000454520 RUNDC1Q96C34 613 aa8.43□□□□□ -1.06
RACGAP1-203ENST00000454520 PLEKHF1Q96S99 279 aa8.43□□□□□ -1.06
RACGAP1-203ENST00000454520 UTRNP46939 3433 aa8.43□□□□□ -1.06
RACGAP1-203ENST00000454520 KCNQ3O43525 872 aa8.43□□□□□ -1.06
RACGAP1-203ENST00000454520 TMPOP42166 694 aaKnown RBP8.43□□□□□ -1.06
RACGAP1-203ENST00000454520 NFE2L2Q16236 605 aa8.43□□□□□ -1.06
RACGAP1-203ENST00000454520 MAP3K5Q99683 1374 aa8.43□□□□□ -1.06
RACGAP1-203ENST00000454520 ZBTB7AO95365 584 aa8.43□□□□□ -1.06
RACGAP1-203ENST00000454520 KDM6AO15550 1401 aaPredicted RBP8.42□□□□□ -1.06
RACGAP1-203ENST00000454520 PNISRQ8TF01 805 aaKnown RBP8.42□□□□□ -1.06
RACGAP1-203ENST00000454520 ATF5Q9Y2D1 282 aaPredicted RBP8.42□□□□□ -1.06
RACGAP1-203ENST00000454520 NCAPD2Q15021 1401 aa8.42□□□□□ -1.06
RACGAP1-203ENST00000454520 SLC15A2Q16348 729 aa8.42□□□□□ -1.06
RACGAP1-203ENST00000454520 KLHL34Q8N239 644 aa8.42□□□□□ -1.06
RACGAP1-203ENST00000454520 BCL9O00512 1426 aa8.41□□□□□ -1.06
RACGAP1-203ENST00000454520 PIP4K2AP48426 406 aaPredicted RBP8.41□□□□□ -1.06
RACGAP1-203ENST00000454520 AK7Q96M32 723 aa8.41□□□□□ -1.06
RACGAP1-203ENST00000454520 PPP1R1BQ9UD71 204 aaPredicted RBP8.41□□□□□ -1.06
RACGAP1-203ENST00000454520 WNK3Q9BYP7 1800 aa8.41□□□□□ -1.06
RACGAP1-203ENST00000454520 ITPK1Q13572 414 aa8.41□□□□□ -1.06
RACGAP1-203ENST00000454520 ZNF827Q17R98 1081 aa8.41□□□□□ -1.06
RACGAP1-203ENST00000454520 GNPATO15228 680 aa8.4□□□□□ -1.06
RACGAP1-203ENST00000454520 SLC27A3Q5K4L6 730 aa8.4□□□□□ -1.06
RACGAP1-203ENST00000454520 ZNF790Q6PG37 636 aa8.4□□□□□ -1.06
RACGAP1-203ENST00000454520 DNAJC10Q8IXB1 793 aa8.4□□□□□ -1.06
RACGAP1-203ENST00000454520 ZNF496Q96IT1 587 aaPredicted RBP8.4□□□□□ -1.06
RACGAP1-203ENST00000454520 SBF2Q86WG5 1849 aa8.4□□□□□ -1.06
RACGAP1-203ENST00000454520 CANXP27824 592 aaKnown RBP8.4□□□□□ -1.06
RACGAP1-203ENST00000454520 TAF7Q15545 349 aaPredicted RBP8.4□□□□□ -1.06
RACGAP1-203ENST00000454520 MSL1Q68DK7 614 aa8.4□□□□□ -1.06
RACGAP1-203ENST00000454520 NGEFQ8N5V2 710 aa8.4□□□□□ -1.06
RACGAP1-203ENST00000454520 NECTIN2Q92692 538 aa8.4□□□□□ -1.06
RACGAP1-203ENST00000454520 SLC4A9Q96Q91 983 aa8.4□□□□□ -1.06
RACGAP1-203ENST00000454520 DOT1LQ8TEK3 1739 aa8.4□□□□□ -1.06
RACGAP1-203ENST00000454520 ELL2O00472 640 aaPredicted RBP8.4□□□□□ -1.07
RACGAP1-203ENST00000454520 NPM2Q86SE8 214 aaKnown RBP8.4□□□□□ -1.07
RACGAP1-203ENST00000454520 LINC00116Q8NCU8 138 aa8.4□□□□□ -1.07
RACGAP1-203ENST00000454520 TSPYL4Q9UJ04 414 aa8.4□□□□□ -1.07
RACGAP1-203ENST00000454520 PRAMEF22A3QJZ6 481 aa8.39□□□□□ -1.07
RACGAP1-203ENST00000454520 BTAF1O14981 1849 aa8.39□□□□□ -1.07
RACGAP1-203ENST00000454520 RGPD1P0DJD0 1748 aa8.39□□□□□ -1.07
RACGAP1-203ENST00000454520 EIF2S2P20042 333 aaKnown RBP8.39□□□□□ -1.07
RACGAP1-203ENST00000454520 SHANK3Q9BYB0 1731 aa8.38□□□□□ -1.07
RACGAP1-203ENST00000454520 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.38□□□□□ -1.07
RACGAP1-203ENST00000454520 LMOD3Q0VAK6 560 aa8.38□□□□□ -1.07
RACGAP1-203ENST00000454520 AMIGO3Q86WK7 504 aa8.38□□□□□ -1.07
RACGAP1-203ENST00000454520 FMNL2Q96PY5 1086 aa8.38□□□□□ -1.07
RACGAP1-203ENST00000454520 USP16Q9Y5T5 823 aa8.38□□□□□ -1.07
RACGAP1-203ENST00000454520 A1BGP04217 495 aa8.37□□□□□ -1.07
RACGAP1-203ENST00000454520 CRKLP46109 303 aaKnown RBP8.37□□□□□ -1.07
RACGAP1-203ENST00000454520 KRT24Q2M2I5 525 aa8.37□□□□□ -1.07
RACGAP1-203ENST00000454520 TRIM35Q9UPQ4 493 aa8.37□□□□□ -1.07
RACGAP1-203ENST00000454520 RTCBQ9Y3I0 505 aaKnown RBP8.37□□□□□ -1.07
RACGAP1-203ENST00000454520 PKD1L3Q7Z443 1732 aa8.37□□□□□ -1.07
RACGAP1-203ENST00000454520 COL23A1Q86Y22 540 aaPredicted RBP8.37□□□□□ -1.07
RACGAP1-203ENST00000454520 TNS1Q9HBL0 1735 aaKnown RBP8.37□□□□□ -1.07
RACGAP1-203ENST00000454520 ITGB4P16144 1822 aa8.37□□□□□ -1.07
RACGAP1-203ENST00000454520 HTATSF1O43719 755 aaKnown RBP8.36□□□□□ -1.07
RACGAP1-203ENST00000454520 TRAPPC3LQ5T215 181 aa8.36□□□□□ -1.07
RACGAP1-203ENST00000454520 WWC3Q9ULE0 1092 aa8.36□□□□□ -1.07
RACGAP1-203ENST00000454520 STARD3NLO95772 234 aa8.36□□□□□ -1.07
RACGAP1-203ENST00000454520 RFC4P35249 363 aa8.36□□□□□ -1.07
RACGAP1-203ENST00000454520 MYL6BP14649 208 aa8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 AKT1S1Q96B36 256 aa8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 ZNF428Q96B54 188 aa8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 SPON1Q9HCB6 807 aa8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 ZBTB1Q9Y2K1 713 aa8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 NHSQ6T4R5 1651 aa8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 TOGARAM1Q9Y4F4 1720 aa8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 PNPLA7Q6ZV29 1317 aa8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 TCERG1O14776 1098 aaKnown RBP8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 BICDL1Q6ZP65 573 aa8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 TSR2Q969E8 191 aaKnown RBP8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 TBC1D2BQ9UPU7 963 aa8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 CEMIPQ8WUJ3 1361 aa8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 ANXA1P04083 346 aa8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 SNRPA1P09661 255 aaKnown RBP8.35□□□□□ -1.07
RACGAP1-203ENST00000454520 ARHGEF1Q92888 912 aaKnown RBP8.34□□□□□ -1.07
RACGAP1-203ENST00000454520 CCDC87Q9NVE4 849 aa8.34□□□□□ -1.07
RACGAP1-203ENST00000454520 SRP68Q9UHB9 627 aaKnown RBP8.34□□□□□ -1.07
RACGAP1-203ENST00000454520 CYP19A1P11511 503 aaPredicted RBP8.34□□□□□ -1.07
RACGAP1-203ENST00000454520 WWC1Q8IX03 1113 aa8.34□□□□□ -1.07
RACGAP1-203ENST00000454520 ZPR1O75312 459 aa8.33□□□□□ -1.08
RACGAP1-203ENST00000454520 AIMP1Q12904 312 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms