RNA–Protein interactions for RNA: ENST00000454318.1

SH3YL1-210, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 3

Gene SH3YL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-210ENST00000454318 GIGYF1O75420 1035 aaPredicted RBP16.3■□□□□ 0.2
SH3YL1-210ENST00000454318 ATP6V1AP38606 617 aa16.3■□□□□ 0.2
SH3YL1-210ENST00000454318 POLR3GLQ9BT43 218 aa16.3■□□□□ 0.2
SH3YL1-210ENST00000454318 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
SH3YL1-210ENST00000454318 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
SH3YL1-210ENST00000454318 GNPATO15228 680 aa16.28■□□□□ 0.2
SH3YL1-210ENST00000454318 C1QTNF8P60827 252 aa16.28■□□□□ 0.2
SH3YL1-210ENST00000454318 ZNF530Q6P9A1 599 aaPredicted RBP16.28■□□□□ 0.2
SH3YL1-210ENST00000454318 NLGN2Q8NFZ4 835 aa16.28■□□□□ 0.2
SH3YL1-210ENST00000454318 TRAPPC3LQ5T215 181 aa16.27■□□□□ 0.2
SH3YL1-210ENST00000454318 ATG3Q9NT62 314 aa16.27■□□□□ 0.2
SH3YL1-210ENST00000454318 GOLGB1Q14789 3259 aaKnown RBP16.27■□□□□ 0.19
SH3YL1-210ENST00000454318 NPC1L1Q9UHC9 1359 aa16.26■□□□□ 0.19
SH3YL1-210ENST00000454318 COL5A3P25940 1745 aaPredicted RBP16.26■□□□□ 0.19
SH3YL1-210ENST00000454318 CABP4P57796 275 aa16.26■□□□□ 0.19
SH3YL1-210ENST00000454318 TGFB2P61812 414 aa16.26■□□□□ 0.19
SH3YL1-210ENST00000454318 LINC00116Q8NCU8 138 aa16.26■□□□□ 0.19
SH3YL1-210ENST00000454318 ASAP1Q9ULH1 1129 aa16.26■□□□□ 0.19
SH3YL1-210ENST00000454318 KIF13BQ9NQT8 1826 aa16.25■□□□□ 0.19
SH3YL1-210ENST00000454318 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
SH3YL1-210ENST00000454318 MTHFSP49914 203 aa16.25■□□□□ 0.19
SH3YL1-210ENST00000454318 MSL1Q68DK7 614 aa16.25■□□□□ 0.19
SH3YL1-210ENST00000454318 PHF14O94880 888 aa16.24■□□□□ 0.19
SH3YL1-210ENST00000454318 KDM6AO15550 1401 aaPredicted RBP16.23■□□□□ 0.19
SH3YL1-210ENST00000454318 RPS6KA4O75676 772 aa16.23■□□□□ 0.19
SH3YL1-210ENST00000454318 YBX3P16989 372 aaKnown RBP eCLIP16.23■□□□□ 0.19
SH3YL1-210ENST00000454318 AKAP4Q5JQC9 854 aa16.23■□□□□ 0.19
SH3YL1-210ENST00000454318 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
SH3YL1-210ENST00000454318 ADCY9O60503 1353 aa16.23■□□□□ 0.19
SH3YL1-210ENST00000454318 RFC4P35249 363 aa16.22■□□□□ 0.19
SH3YL1-210ENST00000454318 ITPK1Q13572 414 aa16.22■□□□□ 0.19
SH3YL1-210ENST00000454318 MRC1P22897 1456 aa16.22■□□□□ 0.19
SH3YL1-210ENST00000454318 C10orf71Q711Q0 1435 aa16.21■□□□□ 0.19
SH3YL1-210ENST00000454318 SCN11AQ9UI33 1791 aa16.21■□□□□ 0.19
SH3YL1-210ENST00000454318 AMER1Q5JTC6 1135 aaPredicted RBP16.21■□□□□ 0.19
SH3YL1-210ENST00000454318 RBM42Q9BTD8 480 aaKnown RBP16.21■□□□□ 0.19
SH3YL1-210ENST00000454318 MMP10P09238 476 aa16.2■□□□□ 0.18
SH3YL1-210ENST00000454318 IL13P35225 146 aa16.2■□□□□ 0.18
SH3YL1-210ENST00000454318 SULT6B1Q6IMI4 303 aa16.2■□□□□ 0.18
SH3YL1-210ENST00000454318 GPBP1L1Q9HC44 474 aaPredicted RBP16.2■□□□□ 0.18
SH3YL1-210ENST00000454318 PARP3Q9Y6F1 533 aa16.2■□□□□ 0.18
SH3YL1-210ENST00000454318 ATP10DQ9P241 1426 aa16.19■□□□□ 0.18
SH3YL1-210ENST00000454318 C4AP0C0L4 1744 aa16.19■□□□□ 0.18
SH3YL1-210ENST00000454318 SENP3-EIF4A1A0A087X0R7 540 aa16.19■□□□□ 0.18
SH3YL1-210ENST00000454318 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
SH3YL1-210ENST00000454318 KIF7Q2M1P5 1343 aa16.18■□□□□ 0.18
SH3YL1-210ENST00000454318 SLC52A2Q9HAB3 445 aa16.17■□□□□ 0.18
SH3YL1-210ENST00000454318 ADAMTS7Q9UKP4 1686 aa16.17■□□□□ 0.18
SH3YL1-210ENST00000454318 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
SH3YL1-210ENST00000454318 DIAPH1O60610 1272 aaKnown RBP16.16■□□□□ 0.18
SH3YL1-210ENST00000454318 ARHGEF1Q92888 912 aaKnown RBP16.16■□□□□ 0.18
SH3YL1-210ENST00000454318 GYS1P13807 737 aa16.15■□□□□ 0.18
SH3YL1-210ENST00000454318 CRKLP46109 303 aaKnown RBP16.15■□□□□ 0.18
SH3YL1-210ENST00000454318 NFATC2IPQ8NCF5 419 aa16.15■□□□□ 0.18
SH3YL1-210ENST00000454318 USP42Q9H9J4 1324 aaKnown RBP16.15■□□□□ 0.18
SH3YL1-210ENST00000454318 AMIGO3Q86WK7 504 aa16.14■□□□□ 0.17
SH3YL1-210ENST00000454318 TEX13AQ9BXU3 409 aaPredicted RBP16.14■□□□□ 0.17
SH3YL1-210ENST00000454318 PDZRN3Q9UPQ7 1066 aa16.14■□□□□ 0.17
SH3YL1-210ENST00000454318 ZC3H4Q9UPT8 1303 aaKnown RBP16.14■□□□□ 0.17
SH3YL1-210ENST00000454318 TJP1Q07157 1748 aa16.14■□□□□ 0.17
SH3YL1-210ENST00000454318 ZPR1O75312 459 aa16.13■□□□□ 0.17
SH3YL1-210ENST00000454318 AEBP1Q8IUX7 1158 aa16.13■□□□□ 0.17
SH3YL1-210ENST00000454318 GAS2L2Q8NHY3 880 aa16.13■□□□□ 0.17
SH3YL1-210ENST00000454318 ARFGEF1Q9Y6D6 1849 aa16.12■□□□□ 0.17
SH3YL1-210ENST00000454318 A0A087WZG4 1122 aa16.12■□□□□ 0.17
SH3YL1-210ENST00000454318 PTCD1O75127 700 aaKnown RBP16.12■□□□□ 0.17
SH3YL1-210ENST00000454318 CFAP53Q96M91 514 aa16.12■□□□□ 0.17
SH3YL1-210ENST00000454318 SLC4A9Q96Q91 983 aa16.12■□□□□ 0.17
SH3YL1-210ENST00000454318 KIAA1551Q9HCM1 1747 aa16.11■□□□□ 0.17
SH3YL1-210ENST00000454318 PER1O15534 1290 aaPredicted RBP16.11■□□□□ 0.17
SH3YL1-210ENST00000454318 TTC5Q8N0Z6 440 aa16.11■□□□□ 0.17
SH3YL1-210ENST00000454318 PIM2Q9P1W9 311 aa16.11■□□□□ 0.17
SH3YL1-210ENST00000454318 MYH14Q7Z406 1995 aaKnown RBP16.11■□□□□ 0.17
SH3YL1-210ENST00000454318 BRCA1P38398 1863 aaKnown RBP16.1■□□□□ 0.17
SH3YL1-210ENST00000454318 RNMTO43148 476 aaKnown RBP16.1■□□□□ 0.17
SH3YL1-210ENST00000454318 STARD3NLO95772 234 aa16.1■□□□□ 0.17
SH3YL1-210ENST00000454318 UBR2Q8IWV8 1755 aa16.09■□□□□ 0.17
SH3YL1-210ENST00000454318 SOS1Q07889 1333 aaPredicted RBP16.09■□□□□ 0.17
SH3YL1-210ENST00000454318 DALRD3Q5D0E6 543 aaKnown RBP16.08■□□□□ 0.16
SH3YL1-210ENST00000454318 NPM2Q86SE8 214 aaKnown RBP16.08■□□□□ 0.16
SH3YL1-210ENST00000454318 NARFQ9UHQ1 456 aa16.08■□□□□ 0.16
SH3YL1-210ENST00000454318 NUDCQ9Y266 331 aa16.08■□□□□ 0.16
SH3YL1-210ENST00000454318 BCS1LQ9Y276 419 aa16.08■□□□□ 0.16
SH3YL1-210ENST00000454318 COL15A1P39059 1388 aa16.08■□□□□ 0.16
SH3YL1-210ENST00000454318 HSPA6P17066 643 aa16.07■□□□□ 0.16
SH3YL1-210ENST00000454318 TEFQ10587 303 aa16.07■□□□□ 0.16
SH3YL1-210ENST00000454318 KCPQ6ZWJ8 1503 aa16.07■□□□□ 0.16
SH3YL1-210ENST00000454318 VIRMAQ69YN4 1812 aaKnown RBP16.07■□□□□ 0.16
SH3YL1-210ENST00000454318 COL3A1P02461 1466 aaPredicted RBP16.06■□□□□ 0.16
SH3YL1-210ENST00000454318 KDM2BQ8NHM5 1336 aa16.06■□□□□ 0.16
SH3YL1-210ENST00000454318 GNAT3A8MTJ3 354 aa16.06■□□□□ 0.16
SH3YL1-210ENST00000454318 RGL2O15211 777 aa16.06■□□□□ 0.16
SH3YL1-210ENST00000454318 FCHSD2O94868 740 aa16.06■□□□□ 0.16
SH3YL1-210ENST00000454318 CYP19A1P11511 503 aaPredicted RBP16.06■□□□□ 0.16
SH3YL1-210ENST00000454318 INTS5Q6P9B9 1019 aaKnown RBP16.06■□□□□ 0.16
SH3YL1-210ENST00000454318 DPEP1P16444 411 aa16.05■□□□□ 0.16
SH3YL1-210ENST00000454318 N4BP2Q86UW6 1770 aaPredicted RBP16.05■□□□□ 0.16
SH3YL1-210ENST00000454318 CEP350Q5VT06 3117 aa16.04■□□□□ 0.16
SH3YL1-210ENST00000454318 A0A0G2JLW4 131 aa16.04■□□□□ 0.16
SH3YL1-210ENST00000454318 POLRMTO00411 1230 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms