RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 PLEKHO1Q53GL0 409 aaPredicted RBP32.57■■■□□ 2.8
LYSMD2-202ENST00000454181 PANK3Q9H999 370 aa32.57■■■□□ 2.8
LYSMD2-202ENST00000454181 PLEKHG2Q9H7P9 1386 aa32.57■■■□□ 2.8
LYSMD2-202ENST00000454181 UBR3Q6ZT12 1888 aa32.57■■■□□ 2.8
LYSMD2-202ENST00000454181 ERVV-2B6SEH9 535 aa32.56■■■□□ 2.8
LYSMD2-202ENST00000454181 WWC3Q9ULE0 1092 aa32.56■■■□□ 2.8
LYSMD2-202ENST00000454181 ATP10DQ9P241 1426 aa32.56■■■□□ 2.8
LYSMD2-202ENST00000454181 RBM42Q9BTD8 480 aaKnown RBP32.55■■■□□ 2.8
LYSMD2-202ENST00000454181 GPBP1L1Q9HC44 474 aaPredicted RBP32.55■■■□□ 2.8
LYSMD2-202ENST00000454181 RTCBQ9Y3I0 505 aaKnown RBP32.55■■■□□ 2.8
LYSMD2-202ENST00000454181 TRAPPC3LQ5T215 181 aa32.54■■■□□ 2.8
LYSMD2-202ENST00000454181 DCAF5Q96JK2 942 aa32.54■■■□□ 2.8
LYSMD2-202ENST00000454181 HSPA5P11021 654 aaKnown RBP32.53■■■□□ 2.8
LYSMD2-202ENST00000454181 MMP10P09238 476 aa32.51■■■□□ 2.79
LYSMD2-202ENST00000454181 CABP4P57796 275 aa32.51■■■□□ 2.79
LYSMD2-202ENST00000454181 AMOTQ4VCS5 1084 aa32.51■■■□□ 2.79
LYSMD2-202ENST00000454181 ZNF530Q6P9A1 599 aaPredicted RBP32.51■■■□□ 2.79
LYSMD2-202ENST00000454181 MORC1Q86VD1 984 aa32.51■■■□□ 2.79
LYSMD2-202ENST00000454181 NLGN1Q8N2Q7 840 aa32.49■■■□□ 2.79
LYSMD2-202ENST00000454181 ZNF526Q8TF50 670 aaPredicted RBP32.48■■■□□ 2.79
LYSMD2-202ENST00000454181 C1orf141Q5JVX7 400 aa32.47■■■□□ 2.79
LYSMD2-202ENST00000454181 MTHFSP49914 203 aa32.46■■■□□ 2.79
LYSMD2-202ENST00000454181 RC3H1Q5TC82 1133 aaKnown RBP32.46■■■□□ 2.79
LYSMD2-202ENST00000454181 ADRA2BP18089 450 aa32.45■■■□□ 2.79
LYSMD2-202ENST00000454181 RFC4P35249 363 aa32.45■■■□□ 2.79
LYSMD2-202ENST00000454181 KDRP35968 1356 aa32.45■■■□□ 2.78
LYSMD2-202ENST00000454181 SLC4A9Q96Q91 983 aa32.43■■■□□ 2.78
LYSMD2-202ENST00000454181 KNSTRNQ9Y448 316 aa32.43■■■□□ 2.78
LYSMD2-202ENST00000454181 ARHGEF1Q92888 912 aaKnown RBP32.42■■■□□ 2.78
LYSMD2-202ENST00000454181 RPS6KA4O75676 772 aa32.41■■■□□ 2.78
LYSMD2-202ENST00000454181 TGFB2P61812 414 aa32.41■■■□□ 2.78
LYSMD2-202ENST00000454181 CNTNAP4Q9C0A0 1308 aa32.41■■■□□ 2.78
LYSMD2-202ENST00000454181 AEBP1Q8IUX7 1158 aa32.4■■■□□ 2.78
LYSMD2-202ENST00000454181 CCDC87Q9NVE4 849 aa32.4■■■□□ 2.78
LYSMD2-202ENST00000454181 ADCY9O60503 1353 aa32.4■■■□□ 2.78
LYSMD2-202ENST00000454181 PTCD1O75127 700 aaKnown RBP32.39■■■□□ 2.78
LYSMD2-202ENST00000454181 SULT6B1Q6IMI4 303 aa32.39■■■□□ 2.78
LYSMD2-202ENST00000454181 CCER1Q8TC90 406 aaPredicted RBP32.38■■■□□ 2.77
LYSMD2-202ENST00000454181 PARP3Q9Y6F1 533 aa32.38■■■□□ 2.77
LYSMD2-202ENST00000454181 KDM6AO15550 1401 aaPredicted RBP32.37■■■□□ 2.77
LYSMD2-202ENST00000454181 NFATC2IPQ8NCF5 419 aa32.37■■■□□ 2.77
LYSMD2-202ENST00000454181 BCS1LQ9Y276 419 aa32.36■■■□□ 2.77
LYSMD2-202ENST00000454181 A0A0G2JLW4 131 aa32.35■■■□□ 2.77
LYSMD2-202ENST00000454181 GYS1P13807 737 aa32.35■■■□□ 2.77
LYSMD2-202ENST00000454181 PXDNLA1KZ92 1463 aa32.33■■■□□ 2.77
LYSMD2-202ENST00000454181 ZNF831Q5JPB2 1677 aa32.33■■■□□ 2.77
LYSMD2-202ENST00000454181 CICQ96RK0 1608 aaPredicted RBP32.33■■■□□ 2.77
LYSMD2-202ENST00000454181 IL13P35225 146 aa32.3■■■□□ 2.76
LYSMD2-202ENST00000454181 CRKLP46109 303 aaKnown RBP32.3■■■□□ 2.76
LYSMD2-202ENST00000454181 ARHGAP27Q6ZUM4 889 aa32.3■■■□□ 2.76
LYSMD2-202ENST00000454181 C10orf71Q711Q0 1435 aa32.29■■■□□ 2.76
LYSMD2-202ENST00000454181 FCHSD2O94868 740 aa32.29■■■□□ 2.76
LYSMD2-202ENST00000454181 DPEP1P16444 411 aa32.29■■■□□ 2.76
LYSMD2-202ENST00000454181 HSPA6P17066 643 aa32.28■■■□□ 2.76
LYSMD2-202ENST00000454181 AKAP4Q5JQC9 854 aa32.26■■■□□ 2.75
LYSMD2-202ENST00000454181 COL5A3P25940 1745 aaPredicted RBP32.26■■■□□ 2.75
LYSMD2-202ENST00000454181 SRP68Q9UHB9 627 aaKnown RBP32.24■■■□□ 2.75
LYSMD2-202ENST00000454181 KIF13BQ9NQT8 1826 aa32.23■■■□□ 2.75
LYSMD2-202ENST00000454181 C4AP0C0L4 1744 aa32.23■■■□□ 2.75
LYSMD2-202ENST00000454181 USP42Q9H9J4 1324 aaKnown RBP32.22■■■□□ 2.75
LYSMD2-202ENST00000454181 N4BP2Q86UW6 1770 aaPredicted RBP32.22■■■□□ 2.75
LYSMD2-202ENST00000454181 KIF3CO14782 793 aa32.21■■■□□ 2.75
LYSMD2-202ENST00000454181 FKBP8Q14318 412 aa32.21■■■□□ 2.75
LYSMD2-202ENST00000454181 AMER1Q5JTC6 1135 aaPredicted RBP32.21■■■□□ 2.75
LYSMD2-202ENST00000454181 PIM2Q9P1W9 311 aa32.21■■■□□ 2.75
LYSMD2-202ENST00000454181 ZPR1O75312 459 aa32.2■■■□□ 2.75
LYSMD2-202ENST00000454181 SLC52A2Q9HAB3 445 aa32.2■■■□□ 2.75
LYSMD2-202ENST00000454181 MYH14Q7Z406 1995 aaKnown RBP32.19■■■□□ 2.74
LYSMD2-202ENST00000454181 CEP350Q5VT06 3117 aa32.18■■■□□ 2.74
LYSMD2-202ENST00000454181 HMOX1P09601 288 aa32.18■■■□□ 2.74
LYSMD2-202ENST00000454181 INTS5Q6P9B9 1019 aaKnown RBP32.18■■■□□ 2.74
LYSMD2-202ENST00000454181 DALRD3Q5D0E6 543 aaKnown RBP32.17■■■□□ 2.74
LYSMD2-202ENST00000454181 DNAJC10Q8IXB1 793 aa32.17■■■□□ 2.74
LYSMD2-202ENST00000454181 LGR6Q9HBX8 967 aa32.17■■■□□ 2.74
LYSMD2-202ENST00000454181 KIAA1551Q9HCM1 1747 aa32.16■■■□□ 2.74
LYSMD2-202ENST00000454181 KCNA3P22001 575 aa32.15■■■□□ 2.74
LYSMD2-202ENST00000454181 DDR1Q08345 913 aa32.15■■■□□ 2.74
LYSMD2-202ENST00000454181 RNMTO43148 476 aaKnown RBP32.14■■■□□ 2.74
LYSMD2-202ENST00000454181 DIAPH1O60610 1272 aaKnown RBP32.13■■■□□ 2.73
LYSMD2-202ENST00000454181 KIF7Q2M1P5 1343 aa32.13■■■□□ 2.73
LYSMD2-202ENST00000454181 SCN11AQ9UI33 1791 aa32.12■■■□□ 2.73
LYSMD2-202ENST00000454181 TOMM70O94826 608 aa32.12■■■□□ 2.73
LYSMD2-202ENST00000454181 SLC39A6Q13433 755 aa32.12■■■□□ 2.73
LYSMD2-202ENST00000454181 C9orf131Q5VYM1 1079 aa32.12■■■□□ 2.73
LYSMD2-202ENST00000454181 USPL1Q5W0Q7 1092 aa32.12■■■□□ 2.73
LYSMD2-202ENST00000454181 CC2D1BQ5T0F9 858 aaKnown RBP32.11■■■□□ 2.73
LYSMD2-202ENST00000454181 TJP1Q07157 1748 aa32.1■■■□□ 2.73
LYSMD2-202ENST00000454181 CYP19A1P11511 503 aaPredicted RBP32.1■■■□□ 2.73
LYSMD2-202ENST00000454181 TM4SF1P30408 202 aa32.1■■■□□ 2.73
LYSMD2-202ENST00000454181 SOS1Q07889 1333 aaPredicted RBP32.09■■■□□ 2.73
LYSMD2-202ENST00000454181 POLRMTO00411 1230 aaKnown RBP32.09■■■□□ 2.73
LYSMD2-202ENST00000454181 CHRNA5P30532 468 aa32.09■■■□□ 2.73
LYSMD2-202ENST00000454181 MTHFSDQ2M296 383 aaKnown RBP32.09■■■□□ 2.73
LYSMD2-202ENST00000454181 APLP1P51693 650 aa32.07■■■□□ 2.72
LYSMD2-202ENST00000454181 IFFO2Q5TF58 517 aa32.07■■■□□ 2.72
LYSMD2-202ENST00000454181 C16orf71Q8IYS4 520 aaPredicted RBP32.07■■■□□ 2.72
LYSMD2-202ENST00000454181 NMRK2Q9NPI5 230 aa32.07■■■□□ 2.72
LYSMD2-202ENST00000454181 NARFQ9UHQ1 456 aa32.06■■■□□ 2.72
LYSMD2-202ENST00000454181 TTC5Q8N0Z6 440 aa32.05■■■□□ 2.72
LYSMD2-202ENST00000454181 VSIG10Q8N0Z9 540 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms