RNA–Protein interactions for RNA: ENST00000453908.7

SH3D21-201, Transcript of SH3 domain containing 21, humanhuman

APPRIS P1 TSL 5

Gene SH3D21, Length 2,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-201ENST00000453908 ATP10DQ9P241 1426 aa26.92■■□□□ 1.9
SH3D21-201ENST00000453908 FAM208AQ9UK61 1670 aaKnown RBP26.91■■□□□ 1.9
SH3D21-201ENST00000453908 LMTK3Q96Q04 1460 aa26.91■■□□□ 1.9
SH3D21-201ENST00000453908 BTBD11A6QL63 1104 aa26.9■■□□□ 1.9
SH3D21-201ENST00000453908 NCAPD2Q15021 1401 aa26.9■■□□□ 1.9
SH3D21-201ENST00000453908 CEP85Q6P2H3 762 aa26.9■■□□□ 1.9
SH3D21-201ENST00000453908 ZNF335Q9H4Z2 1342 aaPredicted RBP26.9■■□□□ 1.9
SH3D21-201ENST00000453908 EIF4A1P60842 406 aaKnown RBP26.89■■□□□ 1.9
SH3D21-201ENST00000453908 ANKRD44Q8N8A2 993 aa26.89■■□□□ 1.9
SH3D21-201ENST00000453908 RNMTO43148 476 aaKnown RBP26.88■■□□□ 1.89
SH3D21-201ENST00000453908 DAXXQ9UER7 740 aaPredicted RBP26.88■■□□□ 1.89
SH3D21-201ENST00000453908 TNS3Q68CZ2 1445 aa26.88■■□□□ 1.89
SH3D21-201ENST00000453908 LMO7Q8WWI1 1683 aa26.88■■□□□ 1.89
SH3D21-201ENST00000453908 CCT4P50991 539 aaKnown RBP26.88■■□□□ 1.89
SH3D21-201ENST00000453908 PHAXQ9H814 394 aaKnown RBP26.88■■□□□ 1.89
SH3D21-201ENST00000453908 UPF2Q9HAU5 1272 aaKnown RBP26.88■■□□□ 1.89
SH3D21-201ENST00000453908 BRINP3Q76B58 766 aa26.87■■□□□ 1.89
SH3D21-201ENST00000453908 XIRP1Q702N8 1843 aaKnown RBP26.87■■□□□ 1.89
SH3D21-201ENST00000453908 APBB1O00213 710 aa26.87■■□□□ 1.89
SH3D21-201ENST00000453908 CSB-PGBD3P0DP91 1061 aa26.87■■□□□ 1.89
SH3D21-201ENST00000453908 STRCQ7RTU9 1775 aa26.86■■□□□ 1.89
SH3D21-201ENST00000453908 MFAP1P55081 439 aaKnown RBP26.86■■□□□ 1.89
SH3D21-201ENST00000453908 DCTPP1Q9H773 170 aa26.86■■□□□ 1.89
SH3D21-201ENST00000453908 SPATA31A3Q5VYP0 1347 aa26.85■■□□□ 1.89
SH3D21-201ENST00000453908 RPAP2Q8IXW5 612 aaPredicted RBP26.85■■□□□ 1.89
SH3D21-201ENST00000453908 RAPGEF4Q8WZA2 1011 aa26.84■■□□□ 1.89
SH3D21-201ENST00000453908 ANXA1P04083 346 aa26.84■■□□□ 1.89
SH3D21-201ENST00000453908 SOS1Q07889 1333 aaPredicted RBP26.83■■□□□ 1.89
SH3D21-201ENST00000453908 CAMTA1Q9Y6Y1 1673 aa26.83■■□□□ 1.89
SH3D21-201ENST00000453908 CHPF2Q9P2E5 772 aa26.83■■□□□ 1.89
SH3D21-201ENST00000453908 TBC1D32Q96NH3 1257 aa26.82■■□□□ 1.88
SH3D21-201ENST00000453908 KDM3BQ7LBC6 1761 aa26.81■■□□□ 1.88
SH3D21-201ENST00000453908 C16orf71Q8IYS4 520 aaPredicted RBP26.81■■□□□ 1.88
SH3D21-201ENST00000453908 SMARCA5O60264 1052 aaPredicted RBP26.79■■□□□ 1.88
SH3D21-201ENST00000453908 PRAMEF22A3QJZ6 481 aa26.78■■□□□ 1.88
SH3D21-201ENST00000453908 BMP2KLQ5H9B9 411 aa26.78■■□□□ 1.88
SH3D21-201ENST00000453908 GNAI2P04899 355 aa26.78■■□□□ 1.88
SH3D21-201ENST00000453908 SLAIN2Q9P270 581 aa26.78■■□□□ 1.88
SH3D21-201ENST00000453908 COL18A1P39060 1754 aa26.77■■□□□ 1.88
SH3D21-201ENST00000453908 TATP17735 454 aaPredicted RBP26.77■■□□□ 1.88
SH3D21-201ENST00000453908 OTUD7AQ8TE49 926 aaPredicted RBP26.77■■□□□ 1.88
SH3D21-201ENST00000453908 MEGF6O75095 1541 aa26.77■■□□□ 1.88
SH3D21-201ENST00000453908 CACNA1FO60840 1977 aa26.77■■□□□ 1.88
SH3D21-201ENST00000453908 PLEKHM2Q8IWE5 1019 aa26.75■■□□□ 1.87
SH3D21-201ENST00000453908 HOXB7P09629 217 aa26.75■■□□□ 1.87
SH3D21-201ENST00000453908 C22orf23Q9BZE7 217 aa26.75■■□□□ 1.87
SH3D21-201ENST00000453908 HMMRO75330 724 aa26.74■■□□□ 1.87
SH3D21-201ENST00000453908 SLC39A6Q13433 755 aa26.74■■□□□ 1.87
SH3D21-201ENST00000453908 GIGYF1O75420 1035 aaPredicted RBP26.73■■□□□ 1.87
SH3D21-201ENST00000453908 GNAI3P08754 354 aa26.73■■□□□ 1.87
SH3D21-201ENST00000453908 LRRFIP2Q9Y608 721 aaKnown RBP26.73■■□□□ 1.87
SH3D21-201ENST00000453908 USP44Q9H0E7 712 aa26.73■■□□□ 1.87
SH3D21-201ENST00000453908 PNMA6EA0A0J9YXQ4 647 aa26.72■■□□□ 1.87
SH3D21-201ENST00000453908 PI4KAP2A4QPH2 592 aa26.72■■□□□ 1.87
SH3D21-201ENST00000453908 GSPT1P15170 499 aaKnown RBP26.72■■□□□ 1.87
SH3D21-201ENST00000453908 PHKG2P15735 406 aa26.72■■□□□ 1.87
SH3D21-201ENST00000453908 PI4KAP1Q8N8J0 262 aa26.72■■□□□ 1.87
SH3D21-201ENST00000453908 EXOC6BQ9Y2D4 811 aa26.72■■□□□ 1.87
SH3D21-201ENST00000453908 OVOS2A0A0G2JMS6 1433 aa26.72■■□□□ 1.87
SH3D21-201ENST00000453908 PROSER3Q2NL68 480 aa26.71■■□□□ 1.87
SH3D21-201ENST00000453908 SPG7Q9UQ90 795 aa26.71■■□□□ 1.87
SH3D21-201ENST00000453908 CRYBG1Q9Y4K1 1723 aa26.71■■□□□ 1.87
SH3D21-201ENST00000453908 PRDM11Q9NQV5 511 aa26.71■■□□□ 1.87
SH3D21-201ENST00000453908 KDM6AO15550 1401 aaPredicted RBP26.71■■□□□ 1.87
SH3D21-201ENST00000453908 NFATC2IPQ8NCF5 419 aa26.7■■□□□ 1.86
SH3D21-201ENST00000453908 UBTFL1P0CB47 393 aaPredicted RBP26.69■■□□□ 1.86
SH3D21-201ENST00000453908 TBC1D9Q6ZT07 1266 aa26.68■■□□□ 1.86
SH3D21-201ENST00000453908 SRCIN1Q9C0H9 1055 aa26.68■■□□□ 1.86
SH3D21-201ENST00000453908 DBF4Q9UBU7 674 aaPredicted RBP26.68■■□□□ 1.86
SH3D21-201ENST00000453908 CPDO75976 1380 aa26.68■■□□□ 1.86
SH3D21-201ENST00000453908 PXDNLA1KZ92 1463 aa26.68■■□□□ 1.86
SH3D21-201ENST00000453908 SOS2Q07890 1332 aaPredicted RBP26.67■■□□□ 1.86
SH3D21-201ENST00000453908 CYP27B1O15528 508 aa26.67■■□□□ 1.86
SH3D21-201ENST00000453908 DNAAF4Q8WXU2 420 aa26.67■■□□□ 1.86
SH3D21-201ENST00000453908 SLC52A2Q9HAB3 445 aa26.67■■□□□ 1.86
SH3D21-201ENST00000453908 IFNL2Q8IZJ0 200 aa26.67■■□□□ 1.86
SH3D21-201ENST00000453908 SIPA1L3O60292 1781 aaPredicted RBP26.66■■□□□ 1.86
SH3D21-201ENST00000453908 BECN1Q14457 450 aa26.66■■□□□ 1.86
SH3D21-201ENST00000453908 ZNF790Q6PG37 636 aa26.66■■□□□ 1.86
SH3D21-201ENST00000453908 HEG1Q9ULI3 1381 aa26.65■■□□□ 1.86
SH3D21-201ENST00000453908 TTC22Q5TAA0 569 aa26.65■■□□□ 1.86
SH3D21-201ENST00000453908 ADCY9O60503 1353 aa26.65■■□□□ 1.86
SH3D21-201ENST00000453908 ATP8B2P98198 1209 aa26.65■■□□□ 1.86
SH3D21-201ENST00000453908 NBPF7P0C2Y1 421 aaPredicted RBP26.64■■□□□ 1.86
SH3D21-201ENST00000453908 BEND3Q5T5X7 828 aa26.64■■□□□ 1.86
SH3D21-201ENST00000453908 CHMP4AQ9BY43 222 aa26.64■■□□□ 1.86
SH3D21-201ENST00000453908 TOM1L2Q6ZVM7 507 aa26.64■■□□□ 1.85
SH3D21-201ENST00000453908 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.64■■□□□ 1.857e-8■□□□□ 9.6
SH3D21-201ENST00000453908 ADAMTS7Q9UKP4 1686 aa26.63■■□□□ 1.85
SH3D21-201ENST00000453908 TBC1D2Q9BYX2 928 aa26.63■■□□□ 1.85
SH3D21-201ENST00000453908 N4BP2Q86UW6 1770 aaPredicted RBP26.62■■□□□ 1.85
SH3D21-201ENST00000453908 RTL5Q5HYW3 569 aaPredicted RBP26.62■■□□□ 1.85
SH3D21-201ENST00000453908 MAP3K2Q9Y2U5 619 aa26.62■■□□□ 1.85
SH3D21-201ENST00000453908 SCN11AQ9UI33 1791 aa26.62■■□□□ 1.85
SH3D21-201ENST00000453908 AIMP1Q12904 312 aaKnown RBP26.61■■□□□ 1.85
SH3D21-201ENST00000453908 CDC45O75419 566 aa26.6■■□□□ 1.85
SH3D21-201ENST00000453908 TSHZ3Q63HK5 1081 aa26.6■■□□□ 1.85
SH3D21-201ENST00000453908 SLKQ9H2G2 1235 aaPredicted RBP26.6■■□□□ 1.85
SH3D21-201ENST00000453908 ZNF496Q96IT1 587 aaPredicted RBP26.59■■□□□ 1.85
SH3D21-201ENST00000453908 DCAF5Q96JK2 942 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms