RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 COL23A1Q86Y22 540 aaPredicted RBP40.33■■■■■ 4.05
CCDC117-206ENST00000453543 ATP6V1AP38606 617 aa40.32■■■■■ 4.05
CCDC117-206ENST00000453543 NFATC2IPQ8NCF5 419 aa40.32■■■■■ 4.05
CCDC117-206ENST00000453543 LGR6Q9HBX8 967 aa40.32■■■■■ 4.05
CCDC117-206ENST00000453543 VIRMAQ69YN4 1812 aaKnown RBP40.32■■■■■ 4.04
CCDC117-206ENST00000453543 AK7Q96M32 723 aa40.3■■■■■ 4.04
CCDC117-206ENST00000453543 COL24A1Q17RW2 1714 aa40.3■■■■■ 4.04
CCDC117-206ENST00000453543 MSH5O43196 834 aa40.29■■■■■ 4.04
CCDC117-206ENST00000453543 UBR3Q6ZT12 1888 aa40.29■■■■■ 4.04
CCDC117-206ENST00000453543 AMIGO3Q86WK7 504 aa40.29■■■■■ 4.04
CCDC117-206ENST00000453543 SLC4A9Q96Q91 983 aa40.29■■■■■ 4.04
CCDC117-206ENST00000453543 ADAMTS7Q9UKP4 1686 aa40.28■■■■■ 4.04
CCDC117-206ENST00000453543 DDX10Q13206 875 aaKnown RBP40.28■■■■■ 4.04
CCDC117-206ENST00000453543 RBM42Q9BTD8 480 aaKnown RBP40.28■■■■■ 4.04
CCDC117-206ENST00000453543 RNMTO43148 476 aaKnown RBP40.27■■■■■ 4.04
CCDC117-206ENST00000453543 NUDCQ9Y266 331 aa40.27■■■■■ 4.04
CCDC117-206ENST00000453543 ZNF831Q5JPB2 1677 aa40.27■■■■■ 4.04
CCDC117-206ENST00000453543 MRC1P22897 1456 aa40.26■■■■■ 4.04
CCDC117-206ENST00000453543 RSPH6AQ9H0K4 717 aa40.26■■■■■ 4.04
CCDC117-206ENST00000453543 SMIM5Q71RC9 77 aa40.25■■■■■ 4.03
CCDC117-206ENST00000453543 SLC52A2Q9HAB3 445 aa40.25■■■■■ 4.03
CCDC117-206ENST00000453543 PRKAR2BP31323 418 aa40.23■■■■■ 4.03
CCDC117-206ENST00000453543 ARXQ96QS3 562 aa40.23■■■■■ 4.03
CCDC117-206ENST00000453543 U2AF1L5P0DN76 240 aaPredicted RBP40.22■■■■■ 4.03
CCDC117-206ENST00000453543 U2AF1Q01081 240 aaKnown RBP eCLIP40.22■■■■■ 4.03
CCDC117-206ENST00000453543 PTCD1O75127 700 aaKnown RBP40.21■■■■■ 4.03
CCDC117-206ENST00000453543 PHF14O94880 888 aa40.21■■■■■ 4.03
CCDC117-206ENST00000453543 FLAD1Q8NFF5 587 aa40.21■■■■■ 4.03
CCDC117-206ENST00000453543 FHDC1Q9C0D6 1143 aaPredicted RBP40.21■■■■■ 4.03
CCDC117-206ENST00000453543 COL5A3P25940 1745 aaPredicted RBP40.21■■■■■ 4.03
CCDC117-206ENST00000453543 GAS2L2Q8NHY3 880 aa40.2■■■■■ 4.03
CCDC117-206ENST00000453543 PHACTR3Q96KR7 559 aa40.2■■■■■ 4.03
CCDC117-206ENST00000453543 MAP3K5Q99683 1374 aa40.2■■■■■ 4.03
CCDC117-206ENST00000453543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP40.18■■■■■ 4.02
CCDC117-206ENST00000453543 GNPATO15228 680 aa40.18■■■■■ 4.02
CCDC117-206ENST00000453543 POLD1P28340 1107 aa40.18■■■■■ 4.02
CCDC117-206ENST00000453543 MSL1Q68DK7 614 aa40.18■■■■■ 4.02
CCDC117-206ENST00000453543 SSFA2P28290 1259 aa40.15■■■■■ 4.02
CCDC117-206ENST00000453543 SYT17Q9BSW7 474 aa40.14■■■■■ 4.02
CCDC117-206ENST00000453543 TJP1Q07157 1748 aa40.13■■■■■ 4.02
CCDC117-206ENST00000453543 GNAT3A8MTJ3 354 aa40.13■■■■■ 4.01
CCDC117-206ENST00000453543 FCHSD2O94868 740 aa40.12■■■■■ 4.01
CCDC117-206ENST00000453543 ZEB1P37275 1124 aaPredicted RBP40.12■■■■■ 4.01
CCDC117-206ENST00000453543 SLC39A6Q13433 755 aa40.12■■■■■ 4.01
CCDC117-206ENST00000453543 CICQ96RK0 1608 aaPredicted RBP40.12■■■■■ 4.01
CCDC117-206ENST00000453543 IL17REQ8NFR9 667 aa40.11■■■■■ 4.01
CCDC117-206ENST00000453543 CNTNAP4Q9C0A0 1308 aa40.1■■■■■ 4.01
CCDC117-206ENST00000453543 RALBP1Q15311 655 aa40.09■■■■■ 4.01
CCDC117-206ENST00000453543 MYH14Q7Z406 1995 aaKnown RBP40.08■■■■■ 4.01
CCDC117-206ENST00000453543 KCPQ6ZWJ8 1503 aa40.08■■■■■ 4.01
CCDC117-206ENST00000453543 RC3H1Q5TC82 1133 aaKnown RBP40.08■■■■■ 4.01
CCDC117-206ENST00000453543 SIPA1L3O60292 1781 aaPredicted RBP40.06■■■■■ 4
CCDC117-206ENST00000453543 RTCBQ9Y3I0 505 aaKnown RBP40.06■■■■■ 4
CCDC117-206ENST00000453543 KLHL34Q8N239 644 aa40.05■■■■■ 4
CCDC117-206ENST00000453543 UBR2Q8IWV8 1755 aa40.03■■■■■ 4
CCDC117-206ENST00000453543 TEFQ10587 303 aa40.03■■■■■ 4
CCDC117-206ENST00000453543 CEMIPQ8WUJ3 1361 aa40.02■■■■■ 4
CCDC117-206ENST00000453543 CRKLP46109 303 aaKnown RBP40.02■■■■■ 4
CCDC117-206ENST00000453543 RPS6KA4O75676 772 aa40■■■■□ 3.99
CCDC117-206ENST00000453543 DNAJC10Q8IXB1 793 aa40■■■■□ 3.99
CCDC117-206ENST00000453543 TRAPPC3LQ5T215 181 aa39.99■■■■□ 3.99
CCDC117-206ENST00000453543 C4AP0C0L4 1744 aa39.96■■■■□ 3.99
CCDC117-206ENST00000453543 ARHGEF1Q92888 912 aaKnown RBP39.96■■■■□ 3.99
CCDC117-206ENST00000453543 MYBBP1AQ9BQG0 1328 aaKnown RBP39.95■■■■□ 3.99
CCDC117-206ENST00000453543 DCAF8L1A6NGE4 600 aa39.95■■■■□ 3.99
CCDC117-206ENST00000453543 ADRA2BP18089 450 aa39.95■■■■□ 3.99
CCDC117-206ENST00000453543 INTS5Q6P9B9 1019 aaKnown RBP39.94■■■■□ 3.98
CCDC117-206ENST00000453543 TTC5Q8N0Z6 440 aa39.94■■■■□ 3.98
CCDC117-206ENST00000453543 MCM10Q7L590 875 aa39.93■■■■□ 3.98
CCDC117-206ENST00000453543 ZNF790Q6PG37 636 aa39.92■■■■□ 3.98
CCDC117-206ENST00000453543 NLGN2Q8NFZ4 835 aa39.92■■■■□ 3.98
CCDC117-206ENST00000453543 RTF1Q92541 710 aaKnown RBP39.92■■■■□ 3.98
CCDC117-206ENST00000453543 PLEKHF1Q96S99 279 aa39.92■■■■□ 3.98
CCDC117-206ENST00000453543 CYP19A1P11511 503 aaPredicted RBP39.91■■■■□ 3.98
CCDC117-206ENST00000453543 CCDC87Q9NVE4 849 aa39.91■■■■□ 3.98
CCDC117-206ENST00000453543 DCTN1Q14203 1278 aa39.9■■■■□ 3.98
CCDC117-206ENST00000453543 VSIG10Q8N0Z9 540 aa39.9■■■■□ 3.98
CCDC117-206ENST00000453543 ZNF496Q96IT1 587 aaPredicted RBP39.9■■■■□ 3.98
CCDC117-206ENST00000453543 RFC4P35249 363 aa39.89■■■■□ 3.98
CCDC117-206ENST00000453543 DLG5Q8TDM6 1919 aa39.89■■■■□ 3.98
CCDC117-206ENST00000453543 NEFMP07197 916 aa39.88■■■■□ 3.97
CCDC117-206ENST00000453543 BTBD11A6QL63 1104 aa39.86■■■■□ 3.97
CCDC117-206ENST00000453543 HEG1Q9ULI3 1381 aa39.85■■■■□ 3.97
CCDC117-206ENST00000453543 KCNQ3O43525 872 aa39.85■■■■□ 3.97
CCDC117-206ENST00000453543 HTATSF1O43719 755 aaKnown RBP39.85■■■■□ 3.97
CCDC117-206ENST00000453543 GYS1P13807 737 aa39.85■■■■□ 3.97
CCDC117-206ENST00000453543 MMP10P09238 476 aa39.83■■■■□ 3.97
CCDC117-206ENST00000453543 PRKRIP1Q9H875 184 aaPredicted RBP39.83■■■■□ 3.97
CCDC117-206ENST00000453543 ZBTB1Q9Y2K1 713 aa39.83■■■■□ 3.97
CCDC117-206ENST00000453543 SOS1Q07889 1333 aaPredicted RBP39.83■■■■□ 3.97
CCDC117-206ENST00000453543 SRP68Q9UHB9 627 aaKnown RBP39.82■■■■□ 3.97
CCDC117-206ENST00000453543 CD2APQ9Y5K6 639 aa39.82■■■■□ 3.97
CCDC117-206ENST00000453543 NLGN1Q8N2Q7 840 aa39.81■■■■□ 3.96
CCDC117-206ENST00000453543 PNNQ9H307 717 aaKnown RBP39.81■■■■□ 3.96
CCDC117-206ENST00000453543 NFE2L2Q16236 605 aa39.8■■■■□ 3.96
CCDC117-206ENST00000453543 FMNL2Q96PY5 1086 aa39.8■■■■□ 3.96
CCDC117-206ENST00000453543 USP42Q9H9J4 1324 aaKnown RBP39.8■■■■□ 3.96
CCDC117-206ENST00000453543 MAPK8IP3Q9UPT6 1336 aa39.8■■■■□ 3.96
CCDC117-206ENST00000453543 GOLGB1Q14789 3259 aaKnown RBP39.8■■■■□ 3.96
CCDC117-206ENST00000453543 UTRNP46939 3433 aa39.79■■■■□ 3.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms