RNA–Protein interactions for RNA: ENST00000453152.1

TRIM50-202, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM50, Length 1,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-202ENST00000453152 AMIGO3Q86WK7 504 aa20.89■□□□□ 0.93
TRIM50-202ENST00000453152 ATP6V1AP38606 617 aa20.88■□□□□ 0.93
TRIM50-202ENST00000453152 NFATC2IPQ8NCF5 419 aa20.88■□□□□ 0.93
TRIM50-202ENST00000453152 CFAP53Q96M91 514 aa20.88■□□□□ 0.93
TRIM50-202ENST00000453152 C4BP0C0L5 1744 aa20.87■□□□□ 0.93
TRIM50-202ENST00000453152 LGR6Q9HBX8 967 aa20.87■□□□□ 0.93
TRIM50-202ENST00000453152 AK7Q96M32 723 aa20.85■□□□□ 0.93
TRIM50-202ENST00000453152 ARXQ96QS3 562 aa20.85■□□□□ 0.93
TRIM50-202ENST00000453152 RNMTO43148 476 aaKnown RBP20.85■□□□□ 0.93
TRIM50-202ENST00000453152 FLAD1Q8NFF5 587 aa20.85■□□□□ 0.93
TRIM50-202ENST00000453152 FHDC1Q9C0D6 1143 aaPredicted RBP20.85■□□□□ 0.93
TRIM50-202ENST00000453152 RSPH6AQ9H0K4 717 aa20.84■□□□□ 0.93
TRIM50-202ENST00000453152 SLC52A2Q9HAB3 445 aa20.84■□□□□ 0.93
TRIM50-202ENST00000453152 COL24A1Q17RW2 1714 aa20.83■□□□□ 0.93
TRIM50-202ENST00000453152 SMIM5Q71RC9 77 aa20.83■□□□□ 0.92
TRIM50-202ENST00000453152 SYT17Q9BSW7 474 aa20.83■□□□□ 0.92
TRIM50-202ENST00000453152 RBM42Q9BTD8 480 aaKnown RBP20.83■□□□□ 0.92
TRIM50-202ENST00000453152 SCN11AQ9UI33 1791 aa20.82■□□□□ 0.92
TRIM50-202ENST00000453152 MSH5O43196 834 aa20.82■□□□□ 0.92
TRIM50-202ENST00000453152 NUDCQ9Y266 331 aa20.82■□□□□ 0.92
TRIM50-202ENST00000453152 MRC1P22897 1456 aa20.82■□□□□ 0.92
TRIM50-202ENST00000453152 UTRNP46939 3433 aa20.82■□□□□ 0.92
TRIM50-202ENST00000453152 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.81■□□□□ 0.92
TRIM50-202ENST00000453152 SSFA2P28290 1259 aa20.81■□□□□ 0.92
TRIM50-202ENST00000453152 MAP3K5Q99683 1374 aa20.81■□□□□ 0.92
TRIM50-202ENST00000453152 POLD1P28340 1107 aa20.8■□□□□ 0.92
TRIM50-202ENST00000453152 PRKAR2BP31323 418 aa20.8■□□□□ 0.92
TRIM50-202ENST00000453152 GAS2L2Q8NHY3 880 aa20.8■□□□□ 0.92
TRIM50-202ENST00000453152 PHACTR3Q96KR7 559 aa20.8■□□□□ 0.92
TRIM50-202ENST00000453152 ADAMTS7Q9UKP4 1686 aa20.8■□□□□ 0.92
TRIM50-202ENST00000453152 UBR3Q6ZT12 1888 aa20.8■□□□□ 0.92
TRIM50-202ENST00000453152 ZNF831Q5JPB2 1677 aa20.8■□□□□ 0.92
TRIM50-202ENST00000453152 GNPATO15228 680 aa20.8■□□□□ 0.92
TRIM50-202ENST00000453152 PTCD1O75127 700 aaKnown RBP20.8■□□□□ 0.92
TRIM50-202ENST00000453152 PHF14O94880 888 aa20.8■□□□□ 0.92
TRIM50-202ENST00000453152 U2AF1L5P0DN76 240 aaPredicted RBP20.79■□□□□ 0.92
TRIM50-202ENST00000453152 U2AF1Q01081 240 aaKnown RBP eCLIP20.79■□□□□ 0.92
TRIM50-202ENST00000453152 DDX10Q13206 875 aaKnown RBP20.79■□□□□ 0.92
TRIM50-202ENST00000453152 MSL1Q68DK7 614 aa20.79■□□□□ 0.92
TRIM50-202ENST00000453152 RC3H1Q5TC82 1133 aaKnown RBP20.78■□□□□ 0.92
TRIM50-202ENST00000453152 IL17REQ8NFR9 667 aa20.78■□□□□ 0.92
TRIM50-202ENST00000453152 CNTNAP4Q9C0A0 1308 aa20.78■□□□□ 0.92
TRIM50-202ENST00000453152 GNAT3A8MTJ3 354 aa20.77■□□□□ 0.92
TRIM50-202ENST00000453152 FCHSD2O94868 740 aa20.77■□□□□ 0.92
TRIM50-202ENST00000453152 SLC39A6Q13433 755 aa20.76■□□□□ 0.91
TRIM50-202ENST00000453152 GOLGB1Q14789 3259 aaKnown RBP20.75■□□□□ 0.91
TRIM50-202ENST00000453152 RTCBQ9Y3I0 505 aaKnown RBP20.74■□□□□ 0.91
TRIM50-202ENST00000453152 CEMIPQ8WUJ3 1361 aa20.73■□□□□ 0.91
TRIM50-202ENST00000453152 COL5A3P25940 1745 aaPredicted RBP20.73■□□□□ 0.91
TRIM50-202ENST00000453152 RPS6KA4O75676 772 aa20.73■□□□□ 0.91
TRIM50-202ENST00000453152 RALBP1Q15311 655 aa20.73■□□□□ 0.91
TRIM50-202ENST00000453152 CRKLP46109 303 aaKnown RBP20.72■□□□□ 0.91
TRIM50-202ENST00000453152 MYH14Q7Z406 1995 aaKnown RBP20.72■□□□□ 0.91
TRIM50-202ENST00000453152 KCPQ6ZWJ8 1503 aa20.72■□□□□ 0.91
TRIM50-202ENST00000453152 ADRA2BP18089 450 aa20.72■□□□□ 0.91
TRIM50-202ENST00000453152 TRAPPC3LQ5T215 181 aa20.72■□□□□ 0.91
TRIM50-202ENST00000453152 CICQ96RK0 1608 aaPredicted RBP20.71■□□□□ 0.91
TRIM50-202ENST00000453152 VIRMAQ69YN4 1812 aaKnown RBP20.71■□□□□ 0.91
TRIM50-202ENST00000453152 DNAJC10Q8IXB1 793 aa20.71■□□□□ 0.91
TRIM50-202ENST00000453152 ARHGEF1Q92888 912 aaKnown RBP20.71■□□□□ 0.91
TRIM50-202ENST00000453152 TEFQ10587 303 aa20.7■□□□□ 0.9
TRIM50-202ENST00000453152 INTS5Q6P9B9 1019 aaKnown RBP20.7■□□□□ 0.9
TRIM50-202ENST00000453152 KLHL34Q8N239 644 aa20.7■□□□□ 0.9
TRIM50-202ENST00000453152 TJP1Q07157 1748 aa20.7■□□□□ 0.9
TRIM50-202ENST00000453152 DCAF8L1A6NGE4 600 aa20.69■□□□□ 0.9
TRIM50-202ENST00000453152 NLGN2Q8NFZ4 835 aa20.69■□□□□ 0.9
TRIM50-202ENST00000453152 VSIG10Q8N0Z9 540 aa20.68■□□□□ 0.9
TRIM50-202ENST00000453152 CYP19A1P11511 503 aaPredicted RBP20.68■□□□□ 0.9
TRIM50-202ENST00000453152 PLEKHF1Q96S99 279 aa20.68■□□□□ 0.9
TRIM50-202ENST00000453152 ZNF790Q6PG37 636 aa20.67■□□□□ 0.9
TRIM50-202ENST00000453152 GYS1P13807 737 aa20.65■□□□□ 0.9
TRIM50-202ENST00000453152 RFC4P35249 363 aa20.65■□□□□ 0.9
TRIM50-202ENST00000453152 TTC5Q8N0Z6 440 aa20.65■□□□□ 0.9
TRIM50-202ENST00000453152 ZNF496Q96IT1 587 aaPredicted RBP20.65■□□□□ 0.9
TRIM50-202ENST00000453152 CCDC87Q9NVE4 849 aa20.65■□□□□ 0.9
TRIM50-202ENST00000453152 CD2APQ9Y5K6 639 aa20.65■□□□□ 0.9
TRIM50-202ENST00000453152 HTATSF1O43719 755 aaKnown RBP20.64■□□□□ 0.9
TRIM50-202ENST00000453152 SIPA1L3O60292 1781 aaPredicted RBP20.64■□□□□ 0.9
TRIM50-202ENST00000453152 MCM10Q7L590 875 aa20.64■□□□□ 0.9
TRIM50-202ENST00000453152 UBR2Q8IWV8 1755 aa20.64■□□□□ 0.9
TRIM50-202ENST00000453152 MYBBP1AQ9BQG0 1328 aaKnown RBP20.64■□□□□ 0.9
TRIM50-202ENST00000453152 ZNF316A6NFI3 1004 aaPredicted RBP20.63■□□□□ 0.89
TRIM50-202ENST00000453152 DCTN1Q14203 1278 aa20.63■□□□□ 0.89
TRIM50-202ENST00000453152 NLGN1Q8N2Q7 840 aa20.63■□□□□ 0.89
TRIM50-202ENST00000453152 RTF1Q92541 710 aaKnown RBP20.63■□□□□ 0.89
TRIM50-202ENST00000453152 SOS1Q07889 1333 aaPredicted RBP20.63■□□□□ 0.89
TRIM50-202ENST00000453152 KCNQ3O43525 872 aa20.63■□□□□ 0.89
TRIM50-202ENST00000453152 MMP10P09238 476 aa20.63■□□□□ 0.89
TRIM50-202ENST00000453152 HEG1Q9ULI3 1381 aa20.62■□□□□ 0.89
TRIM50-202ENST00000453152 BTBD11A6QL63 1104 aa20.62■□□□□ 0.89
TRIM50-202ENST00000453152 SRP68Q9UHB9 627 aaKnown RBP20.62■□□□□ 0.89
TRIM50-202ENST00000453152 ZBTB1Q9Y2K1 713 aa20.62■□□□□ 0.89
TRIM50-202ENST00000453152 USP42Q9H9J4 1324 aaKnown RBP20.61■□□□□ 0.89
TRIM50-202ENST00000453152 C4AP0C0L4 1744 aa20.6■□□□□ 0.89
TRIM50-202ENST00000453152 GPR162Q16538 588 aa20.59■□□□□ 0.89
TRIM50-202ENST00000453152 FMNL2Q96PY5 1086 aa20.59■□□□□ 0.89
TRIM50-202ENST00000453152 PRKRIP1Q9H875 184 aaPredicted RBP20.59■□□□□ 0.89
TRIM50-202ENST00000453152 STARD3NLO95772 234 aa20.59■□□□□ 0.89
TRIM50-202ENST00000453152 NEFMP07197 916 aa20.59■□□□□ 0.89
TRIM50-202ENST00000453152 YY1P25490 414 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms