RNA–Protein interactions for RNA: ENST00000452260.6

SATB1-208, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-208ENST00000452260 PKD1L3Q7Z443 1732 aa13.61□□□□□ -0.23
SATB1-208ENST00000452260 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
SATB1-208ENST00000452260 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
SATB1-208ENST00000452260 TRAPPC3LQ5T215 181 aa13.6□□□□□ -0.23
SATB1-208ENST00000452260 NLGN1Q8N2Q7 840 aa13.6□□□□□ -0.23
SATB1-208ENST00000452260 ATG3Q9NT62 314 aa13.6□□□□□ -0.23
SATB1-208ENST00000452260 TOGARAM1Q9Y4F4 1720 aa13.6□□□□□ -0.23
SATB1-208ENST00000452260 UBR3Q6ZT12 1888 aa13.59□□□□□ -0.23
SATB1-208ENST00000452260 KIF3CO14782 793 aa13.59□□□□□ -0.23
SATB1-208ENST00000452260 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
SATB1-208ENST00000452260 HSP90AB1P08238 724 aaKnown RBP13.58□□□□□ -0.24
SATB1-208ENST00000452260 CCDC87Q9NVE4 849 aa13.58□□□□□ -0.24
SATB1-208ENST00000452260 POLKQ9UBT6 870 aa13.58□□□□□ -0.24
SATB1-208ENST00000452260 BCS1LQ9Y276 419 aa13.58□□□□□ -0.24
SATB1-208ENST00000452260 PLEKHG2Q9H7P9 1386 aa13.58□□□□□ -0.24
SATB1-208ENST00000452260 MAP2P11137 1827 aaKnown RBP13.57□□□□□ -0.24
SATB1-208ENST00000452260 ERVV-2B6SEH9 535 aa13.57□□□□□ -0.24
SATB1-208ENST00000452260 APLP1P51693 650 aa13.57□□□□□ -0.24
SATB1-208ENST00000452260 RC3H1Q5TC82 1133 aaKnown RBP13.57□□□□□ -0.24
SATB1-208ENST00000452260 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
SATB1-208ENST00000452260 TOMM70O94826 608 aa13.56□□□□□ -0.24
SATB1-208ENST00000452260 RFC4P35249 363 aa13.56□□□□□ -0.24
SATB1-208ENST00000452260 ARHGAP27Q6ZUM4 889 aa13.56□□□□□ -0.24
SATB1-208ENST00000452260 ARHGEF1Q92888 912 aaKnown RBP13.56□□□□□ -0.24
SATB1-208ENST00000452260 PARP3Q9Y6F1 533 aa13.56□□□□□ -0.24
SATB1-208ENST00000452260 A0A0G2JLW4 131 aa13.55□□□□□ -0.24
SATB1-208ENST00000452260 FCHSD2O94868 740 aa13.55□□□□□ -0.24
SATB1-208ENST00000452260 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
SATB1-208ENST00000452260 PLEKHO1Q53GL0 409 aaPredicted RBP13.55□□□□□ -0.24
SATB1-208ENST00000452260 DCAF5Q96JK2 942 aa13.55□□□□□ -0.24
SATB1-208ENST00000452260 PXDNLA1KZ92 1463 aa13.55□□□□□ -0.24
SATB1-208ENST00000452260 CICQ96RK0 1608 aaPredicted RBP13.54□□□□□ -0.24
SATB1-208ENST00000452260 RPS6KA4O75676 772 aa13.54□□□□□ -0.24
SATB1-208ENST00000452260 CNTNAP4Q9C0A0 1308 aa13.54□□□□□ -0.24
SATB1-208ENST00000452260 KDRP35968 1356 aa13.54□□□□□ -0.24
SATB1-208ENST00000452260 GYS1P13807 737 aa13.53□□□□□ -0.24
SATB1-208ENST00000452260 DPEP1P16444 411 aa13.53□□□□□ -0.24
SATB1-208ENST00000452260 TNNT2P45379 298 aaPredicted RBP13.53□□□□□ -0.24
SATB1-208ENST00000452260 CABP4P57796 275 aa13.53□□□□□ -0.24
SATB1-208ENST00000452260 AMOTQ4VCS5 1084 aa13.53□□□□□ -0.24
SATB1-208ENST00000452260 SLC4A9Q96Q91 983 aa13.53□□□□□ -0.24
SATB1-208ENST00000452260 POLR3GLQ9BT43 218 aa13.53□□□□□ -0.24
SATB1-208ENST00000452260 C10orf71Q711Q0 1435 aa13.53□□□□□ -0.24
SATB1-208ENST00000452260 ANKRD26Q9UPS8 1709 aa13.52□□□□□ -0.25
SATB1-208ENST00000452260 ZNF530Q6P9A1 599 aaPredicted RBP13.51□□□□□ -0.25
SATB1-208ENST00000452260 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
SATB1-208ENST00000452260 PIM2Q9P1W9 311 aa13.51□□□□□ -0.25
SATB1-208ENST00000452260 TIMELESSQ9UNS1 1208 aa13.51□□□□□ -0.25
SATB1-208ENST00000452260 CEP350Q5VT06 3117 aa13.51□□□□□ -0.25
SATB1-208ENST00000452260 MTHFSP49914 203 aa13.5□□□□□ -0.25
SATB1-208ENST00000452260 C1orf141Q5JVX7 400 aa13.5□□□□□ -0.25
SATB1-208ENST00000452260 C9orf131Q5VYM1 1079 aa13.5□□□□□ -0.25
SATB1-208ENST00000452260 NMRK2Q9NPI5 230 aa13.5□□□□□ -0.25
SATB1-208ENST00000452260 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
SATB1-208ENST00000452260 KIF13BQ9NQT8 1826 aa13.5□□□□□ -0.25
SATB1-208ENST00000452260 PTCD1O75127 700 aaKnown RBP13.49□□□□□ -0.25
SATB1-208ENST00000452260 RBM46Q8TBY0 533 aaKnown RBP13.49□□□□□ -0.25
SATB1-208ENST00000452260 ZNF831Q5JPB2 1677 aa13.48□□□□□ -0.25
SATB1-208ENST00000452260 CRKLP46109 303 aaKnown RBP13.48□□□□□ -0.25
SATB1-208ENST00000452260 DALRD3Q5D0E6 543 aaKnown RBP13.48□□□□□ -0.25
SATB1-208ENST00000452260 DNAJC5GQ8N7S2 189 aa13.48□□□□□ -0.25
SATB1-208ENST00000452260 N4BP2Q86UW6 1770 aaPredicted RBP13.48□□□□□ -0.25
SATB1-208ENST00000452260 C4AP0C0L4 1744 aa13.47□□□□□ -0.25
SATB1-208ENST00000452260 KDM2BQ8NHM5 1336 aa13.47□□□□□ -0.25
SATB1-208ENST00000452260 KCNA3P22001 575 aa13.47□□□□□ -0.25
SATB1-208ENST00000452260 FSTL1Q12841 308 aa13.46□□□□□ -0.25
SATB1-208ENST00000452260 NFATC2IPQ8NCF5 419 aa13.46□□□□□ -0.25
SATB1-208ENST00000452260 SRP68Q9UHB9 627 aaKnown RBP13.46□□□□□ -0.25
SATB1-208ENST00000452260 KIAA1551Q9HCM1 1747 aa13.46□□□□□ -0.25
SATB1-208ENST00000452260 KDM6AO15550 1401 aaPredicted RBP13.46□□□□□ -0.26
SATB1-208ENST00000452260 USP42Q9H9J4 1324 aaKnown RBP13.45□□□□□ -0.26
SATB1-208ENST00000452260 TRIM26Q12899 539 aaPredicted RBP13.45□□□□□ -0.26
SATB1-208ENST00000452260 FKBP8Q14318 412 aa13.45□□□□□ -0.26
SATB1-208ENST00000452260 MORC1Q86VD1 984 aa13.45□□□□□ -0.26
SATB1-208ENST00000452260 PANK3Q9H999 370 aa13.45□□□□□ -0.26
SATB1-208ENST00000452260 RNF181Q9P0P0 153 aa13.45□□□□□ -0.26
SATB1-208ENST00000452260 ZPR1O75312 459 aa13.44□□□□□ -0.26
SATB1-208ENST00000452260 SULT6B1Q6IMI4 303 aa13.44□□□□□ -0.26
SATB1-208ENST00000452260 COL5A3P25940 1745 aaPredicted RBP13.43□□□□□ -0.26
SATB1-208ENST00000452260 DDR1Q08345 913 aa13.43□□□□□ -0.26
SATB1-208ENST00000452260 AEBP1Q8IUX7 1158 aa13.43□□□□□ -0.26
SATB1-208ENST00000452260 KLRG1Q96E93 195 aa13.43□□□□□ -0.26
SATB1-208ENST00000452260 RRAGCQ9HB90 399 aa13.43□□□□□ -0.26
SATB1-208ENST00000452260 POLRMTO00411 1230 aaKnown RBP13.42□□□□□ -0.26
SATB1-208ENST00000452260 TM4SF1P30408 202 aa13.42□□□□□ -0.26
SATB1-208ENST00000452260 CHRNA5P30532 468 aa13.42□□□□□ -0.26
SATB1-208ENST00000452260 EIF4G2P78344 907 aaKnown RBP eCLIP13.42□□□□□ -0.26
SATB1-208ENST00000452260 INTS5Q6P9B9 1019 aaKnown RBP13.42□□□□□ -0.26
SATB1-208ENST00000452260 KCPQ6ZWJ8 1503 aa13.41□□□□□ -0.26
SATB1-208ENST00000452260 AKAP4Q5JQC9 854 aa13.41□□□□□ -0.26
SATB1-208ENST00000452260 USPL1Q5W0Q7 1092 aa13.41□□□□□ -0.26
SATB1-208ENST00000452260 CLSPNQ9HAW4 1339 aa13.4□□□□□ -0.26
SATB1-208ENST00000452260 ZC3H4Q9UPT8 1303 aaKnown RBP13.4□□□□□ -0.26
SATB1-208ENST00000452260 BRCA1P38398 1863 aaKnown RBP13.4□□□□□ -0.26
SATB1-208ENST00000452260 MYH14Q7Z406 1995 aaKnown RBP13.4□□□□□ -0.26
SATB1-208ENST00000452260 DNAJC10Q8IXB1 793 aa13.4□□□□□ -0.26
SATB1-208ENST00000452260 JMYQ8N9B5 988 aa13.4□□□□□ -0.26
SATB1-208ENST00000452260 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
SATB1-208ENST00000452260 SLC52A2Q9HAB3 445 aa13.4□□□□□ -0.26
SATB1-208ENST00000452260 KNSTRNQ9Y448 316 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms