RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 ERVV-2B6SEH9 535 aa25.05■■□□□ 1.6
PDLIM2-214ENST00000452226 GRIN3BO60391 1043 aa25.05■■□□□ 1.6
PDLIM2-214ENST00000452226 ATP6V1AP38606 617 aa25.05■■□□□ 1.6
PDLIM2-214ENST00000452226 ITPK1Q13572 414 aa25.05■■□□□ 1.6
PDLIM2-214ENST00000452226 AMOTQ4VCS5 1084 aa25.05■■□□□ 1.6
PDLIM2-214ENST00000452226 SMIM5Q71RC9 77 aa25.05■■□□□ 1.6
PDLIM2-214ENST00000452226 DCAF5Q96JK2 942 aa25.05■■□□□ 1.6
PDLIM2-214ENST00000452226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.04■■□□□ 1.6
PDLIM2-214ENST00000452226 SSFA2P28290 1259 aa25.03■■□□□ 1.6
PDLIM2-214ENST00000452226 PER1O15534 1290 aaPredicted RBP25.02■■□□□ 1.6
PDLIM2-214ENST00000452226 SULT6B1Q6IMI4 303 aa25.02■■□□□ 1.6
PDLIM2-214ENST00000452226 GNPATO15228 680 aa25.01■■□□□ 1.59
PDLIM2-214ENST00000452226 IL13P35225 146 aa25.01■■□□□ 1.59
PDLIM2-214ENST00000452226 C1QTNF8P60827 252 aa25■■□□□ 1.59
PDLIM2-214ENST00000452226 C1orf141Q5JVX7 400 aa25■■□□□ 1.59
PDLIM2-214ENST00000452226 KDM6AO15550 1401 aaPredicted RBP25■■□□□ 1.59
PDLIM2-214ENST00000452226 KDRP35968 1356 aa24.99■■□□□ 1.59
PDLIM2-214ENST00000452226 MTHFSP49914 203 aa24.99■■□□□ 1.59
PDLIM2-214ENST00000452226 CABP4P57796 275 aa24.99■■□□□ 1.59
PDLIM2-214ENST00000452226 RBM42Q9BTD8 480 aaKnown RBP24.99■■□□□ 1.59
PDLIM2-214ENST00000452226 CD2APQ9Y5K6 639 aa24.99■■□□□ 1.59
PDLIM2-214ENST00000452226 SENP3-EIF4A1A0A087X0R7 540 aa24.97■■□□□ 1.59
PDLIM2-214ENST00000452226 SLC4A9Q96Q91 983 aa24.97■■□□□ 1.59
PDLIM2-214ENST00000452226 ZNF831Q5JPB2 1677 aa24.97■■□□□ 1.59
PDLIM2-214ENST00000452226 GIGYF1O75420 1035 aaPredicted RBP24.96■■□□□ 1.59
PDLIM2-214ENST00000452226 YBX3P16989 372 aaKnown RBP eCLIP24.96■■□□□ 1.59
PDLIM2-214ENST00000452226 CC2D1BQ5T0F9 858 aaKnown RBP24.94■■□□□ 1.58
PDLIM2-214ENST00000452226 COL5A3P25940 1745 aaPredicted RBP24.93■■□□□ 1.58
PDLIM2-214ENST00000452226 RTCBQ9Y3I0 505 aaKnown RBP24.93■■□□□ 1.58
PDLIM2-214ENST00000452226 SCN11AQ9UI33 1791 aa24.93■■□□□ 1.58
PDLIM2-214ENST00000452226 NFATC2IPQ8NCF5 419 aa24.92■■□□□ 1.58
PDLIM2-214ENST00000452226 TRAPPC3LQ5T215 181 aa24.91■■□□□ 1.58
PDLIM2-214ENST00000452226 RC3H1Q5TC82 1133 aaKnown RBP24.91■■□□□ 1.58
PDLIM2-214ENST00000452226 NPC1L1Q9UHC9 1359 aa24.91■■□□□ 1.58
PDLIM2-214ENST00000452226 MYH14Q7Z406 1995 aaKnown RBP24.91■■□□□ 1.58
PDLIM2-214ENST00000452226 PTCD1O75127 700 aaKnown RBP24.9■■□□□ 1.58
PDLIM2-214ENST00000452226 CNTNAP4Q9C0A0 1308 aa24.89■■□□□ 1.58
PDLIM2-214ENST00000452226 HMOX1P09601 288 aa24.89■■□□□ 1.58
PDLIM2-214ENST00000452226 AKAP4Q5JQC9 854 aa24.88■■□□□ 1.57
PDLIM2-214ENST00000452226 DIAPH1O60610 1272 aaKnown RBP24.87■■□□□ 1.57
PDLIM2-214ENST00000452226 MMP10P09238 476 aa24.87■■□□□ 1.57
PDLIM2-214ENST00000452226 CNGB1Q14028 1251 aaPredicted RBP24.87■■□□□ 1.57
PDLIM2-214ENST00000452226 VIRMAQ69YN4 1812 aaKnown RBP24.86■■□□□ 1.57
PDLIM2-214ENST00000452226 RPS6KA4O75676 772 aa24.86■■□□□ 1.57
PDLIM2-214ENST00000452226 ADRA2BP18089 450 aa24.86■■□□□ 1.57
PDLIM2-214ENST00000452226 ARHGEF1Q92888 912 aaKnown RBP24.86■■□□□ 1.57
PDLIM2-214ENST00000452226 NLGN1Q8N2Q7 840 aa24.84■■□□□ 1.57
PDLIM2-214ENST00000452226 LGR6Q9HBX8 967 aa24.84■■□□□ 1.57
PDLIM2-214ENST00000452226 RFC4P35249 363 aa24.83■■□□□ 1.57
PDLIM2-214ENST00000452226 SLC52A2Q9HAB3 445 aa24.83■■□□□ 1.57
PDLIM2-214ENST00000452226 RNMTO43148 476 aaKnown RBP24.82■■□□□ 1.56
PDLIM2-214ENST00000452226 CRKLP46109 303 aaKnown RBP24.82■■□□□ 1.56
PDLIM2-214ENST00000452226 TJP1Q07157 1748 aa24.82■■□□□ 1.56
PDLIM2-214ENST00000452226 WWC3Q9ULE0 1092 aa24.82■■□□□ 1.56
PDLIM2-214ENST00000452226 C4AP0C0L4 1744 aa24.81■■□□□ 1.56
PDLIM2-214ENST00000452226 GYS1P13807 737 aa24.81■■□□□ 1.56
PDLIM2-214ENST00000452226 MTHFSDQ2M296 383 aaKnown RBP24.81■■□□□ 1.56
PDLIM2-214ENST00000452226 CICQ96RK0 1608 aaPredicted RBP24.8■■□□□ 1.56
PDLIM2-214ENST00000452226 KIF13BQ9NQT8 1826 aa24.8■■□□□ 1.56
PDLIM2-214ENST00000452226 ZEB1P37275 1124 aaPredicted RBP24.8■■□□□ 1.56
PDLIM2-214ENST00000452226 MRC1P22897 1456 aa24.79■■□□□ 1.56
PDLIM2-214ENST00000452226 COL3A1P02461 1466 aaPredicted RBP24.78■■□□□ 1.56
PDLIM2-214ENST00000452226 GPBP1L1Q9HC44 474 aaPredicted RBP24.78■■□□□ 1.56
PDLIM2-214ENST00000452226 U2SURPO15042 1029 aaKnown RBP24.77■■□□□ 1.56
PDLIM2-214ENST00000452226 SLC39A6Q13433 755 aa24.77■■□□□ 1.56
PDLIM2-214ENST00000452226 ATP10DQ9P241 1426 aa24.77■■□□□ 1.56
PDLIM2-214ENST00000452226 ADAMTS7Q9UKP4 1686 aa24.76■■□□□ 1.55
PDLIM2-214ENST00000452226 N4BP2Q86UW6 1770 aaPredicted RBP24.76■■□□□ 1.55
PDLIM2-214ENST00000452226 INTS5Q6P9B9 1019 aaKnown RBP24.75■■□□□ 1.55
PDLIM2-214ENST00000452226 DNAJC10Q8IXB1 793 aa24.75■■□□□ 1.55
PDLIM2-214ENST00000452226 SRP68Q9UHB9 627 aaKnown RBP24.75■■□□□ 1.55
PDLIM2-214ENST00000452226 PARP3Q9Y6F1 533 aa24.75■■□□□ 1.55
PDLIM2-214ENST00000452226 CCDC87Q9NVE4 849 aa24.74■■□□□ 1.55
PDLIM2-214ENST00000452226 C10orf71Q711Q0 1435 aa24.74■■□□□ 1.55
PDLIM2-214ENST00000452226 PXDNLA1KZ92 1463 aa24.74■■□□□ 1.55
PDLIM2-214ENST00000452226 KIAA1551Q9HCM1 1747 aa24.74■■□□□ 1.55
PDLIM2-214ENST00000452226 TGFB2P61812 414 aa24.73■■□□□ 1.55
PDLIM2-214ENST00000452226 USP42Q9H9J4 1324 aaKnown RBP24.72■■□□□ 1.55
PDLIM2-214ENST00000452226 KCPQ6ZWJ8 1503 aa24.71■■□□□ 1.55
PDLIM2-214ENST00000452226 A0A0G2JLW4 131 aa24.71■■□□□ 1.55
PDLIM2-214ENST00000452226 CYP19A1P11511 503 aaPredicted RBP24.7■■□□□ 1.54
PDLIM2-214ENST00000452226 FKBP8Q14318 412 aa24.7■■□□□ 1.54
PDLIM2-214ENST00000452226 GAS2L2Q8NHY3 880 aa24.69■■□□□ 1.54
PDLIM2-214ENST00000452226 CFAP53Q96M91 514 aa24.69■■□□□ 1.54
PDLIM2-214ENST00000452226 UBR2Q8IWV8 1755 aa24.68■■□□□ 1.54
PDLIM2-214ENST00000452226 ZNF526Q8TF50 670 aaPredicted RBP24.68■■□□□ 1.54
PDLIM2-214ENST00000452226 BCS1LQ9Y276 419 aa24.68■■□□□ 1.54
PDLIM2-214ENST00000452226 ADCY9O60503 1353 aa24.67■■□□□ 1.54
PDLIM2-214ENST00000452226 SOS1Q07889 1333 aaPredicted RBP24.67■■□□□ 1.54
PDLIM2-214ENST00000452226 GNAT3A8MTJ3 354 aa24.67■■□□□ 1.54
PDLIM2-214ENST00000452226 ZPR1O75312 459 aa24.67■■□□□ 1.54
PDLIM2-214ENST00000452226 DPEP1P16444 411 aa24.67■■□□□ 1.54
PDLIM2-214ENST00000452226 BRCA1P38398 1863 aaKnown RBP24.66■■□□□ 1.54
PDLIM2-214ENST00000452226 DDR1Q08345 913 aa24.66■■□□□ 1.54
PDLIM2-214ENST00000452226 VSIG10Q8N0Z9 540 aa24.66■■□□□ 1.54
PDLIM2-214ENST00000452226 IL17REQ8NFR9 667 aa24.66■■□□□ 1.54
PDLIM2-214ENST00000452226 CEP350Q5VT06 3117 aa24.66■■□□□ 1.54
PDLIM2-214ENST00000452226 TEFQ10587 303 aa24.65■■□□□ 1.54
PDLIM2-214ENST00000452226 USPL1Q5W0Q7 1092 aa24.65■■□□□ 1.54
PDLIM2-214ENST00000452226 TTC5Q8N0Z6 440 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms