RNA–Protein interactions for RNA: ENST00000451980.3

LINC01548-201, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 5 BASIC

Gene LINC01548, Length 696 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-201ENST00000451980 KIF1AQ12756 1690 aa11.3□□□□□ -0.6
LINC01548-201ENST00000451980 NSD2O96028 1365 aa11.29□□□□□ -0.6
LINC01548-201ENST00000451980 OVOS2A0A0J9YW53 1432 aa11.29□□□□□ -0.6
LINC01548-201ENST00000451980 OVOS2Q6IE36 1432 aa11.29□□□□□ -0.6
LINC01548-201ENST00000451980 NRG2O14511 850 aaPredicted RBP11.29□□□□□ -0.6
LINC01548-201ENST00000451980 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
LINC01548-201ENST00000451980 NME9Q86XW9 330 aa11.29□□□□□ -0.6
LINC01548-201ENST00000451980 SHPRHQ149N8 1683 aa11.28□□□□□ -0.6
LINC01548-201ENST00000451980 PPP4CP60510 307 aa11.28□□□□□ -0.6
LINC01548-201ENST00000451980 C14orf37Q86TY3 774 aa11.28□□□□□ -0.6
LINC01548-201ENST00000451980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC01548-201ENST00000451980 BRD4O60885 1362 aaPredicted RBP11.28□□□□□ -0.6
LINC01548-201ENST00000451980 ALS2Q96Q42 1657 aa11.27□□□□□ -0.6
LINC01548-201ENST00000451980 TJAP1Q5JTD0 557 aa11.27□□□□□ -0.61
LINC01548-201ENST00000451980 PRKD2Q9BZL6 878 aa11.27□□□□□ -0.61
LINC01548-201ENST00000451980 MSH6P52701 1360 aa11.27□□□□□ -0.61
LINC01548-201ENST00000451980 FBLN1P23142 703 aa11.26□□□□□ -0.61
LINC01548-201ENST00000451980 ESCO1Q5FWF5 840 aa11.26□□□□□ -0.61
LINC01548-201ENST00000451980 NLRP13Q86W25 1043 aa11.26□□□□□ -0.61
LINC01548-201ENST00000451980 PNISRQ8TF01 805 aaKnown RBP11.26□□□□□ -0.61
LINC01548-201ENST00000451980 V9GY48 417 aaPredicted RBP11.26□□□□□ -0.61
LINC01548-201ENST00000451980 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
LINC01548-201ENST00000451980 COL3A1P02461 1466 aaPredicted RBP11.25□□□□□ -0.61
LINC01548-201ENST00000451980 DPYSL4O14531 572 aa11.25□□□□□ -0.61
LINC01548-201ENST00000451980 CADPS2Q86UW7 1296 aa11.25□□□□□ -0.61
LINC01548-201ENST00000451980 MORC1Q86VD1 984 aa11.25□□□□□ -0.61
LINC01548-201ENST00000451980 NGDNQ8NEJ9 315 aaKnown RBP11.25□□□□□ -0.61
LINC01548-201ENST00000451980 MRS2Q9HD23 443 aa11.25□□□□□ -0.61
LINC01548-201ENST00000451980 PEAK1Q9H792 1746 aa11.25□□□□□ -0.61
LINC01548-201ENST00000451980 PXDNQ92626 1479 aa11.25□□□□□ -0.61
LINC01548-201ENST00000451980 CRYBG1Q9Y4K1 1723 aa11.24□□□□□ -0.61
LINC01548-201ENST00000451980 ATF3P18847 181 aa11.24□□□□□ -0.61
LINC01548-201ENST00000451980 DDX17Q92841 729 aaKnown RBP11.24□□□□□ -0.61
LINC01548-201ENST00000451980 TSKSQ9UJT2 592 aa11.24□□□□□ -0.61
LINC01548-201ENST00000451980 NHSL1Q5SYE7 1610 aa11.24□□□□□ -0.61
LINC01548-201ENST00000451980 FOXO3O43524 673 aa11.23□□□□□ -0.61
LINC01548-201ENST00000451980 BRINP3Q76B58 766 aa11.23□□□□□ -0.61
LINC01548-201ENST00000451980 TTC21AQ8NDW8 1320 aa11.23□□□□□ -0.61
LINC01548-201ENST00000451980 SMG6Q86US8 1419 aaKnown RBP11.23□□□□□ -0.61
LINC01548-201ENST00000451980 TNNT2P45379 298 aaPredicted RBP11.22□□□□□ -0.61
LINC01548-201ENST00000451980 XPCQ01831 940 aaPredicted RBP11.22□□□□□ -0.61
LINC01548-201ENST00000451980 EN1Q05925 392 aaPredicted RBP11.22□□□□□ -0.61
LINC01548-201ENST00000451980 DDX12PQ92771 950 aa11.22□□□□□ -0.61
LINC01548-201ENST00000451980 IL21Q9HBE4 155 aa11.22□□□□□ -0.61
LINC01548-201ENST00000451980 MED1Q15648 1581 aaPredicted RBP11.21□□□□□ -0.61
LINC01548-201ENST00000451980 AATKQ6ZMQ8 1374 aa11.21□□□□□ -0.61
LINC01548-201ENST00000451980 PNPLA6Q8IY17 1366 aa11.21□□□□□ -0.61
LINC01548-201ENST00000451980 TPRNQ4KMQ1 711 aa11.21□□□□□ -0.61
LINC01548-201ENST00000451980 SLAIN2Q9P270 581 aa11.21□□□□□ -0.61
LINC01548-201ENST00000451980 POLKQ9UBT6 870 aa11.21□□□□□ -0.61
LINC01548-201ENST00000451980 SLIT3O75094 1523 aa11.2□□□□□ -0.62
LINC01548-201ENST00000451980 NFAT5O94916 1531 aa11.2□□□□□ -0.62
LINC01548-201ENST00000451980 INSRP06213 1382 aa11.2□□□□□ -0.62
LINC01548-201ENST00000451980 MTHFSP49914 203 aa11.2□□□□□ -0.62
LINC01548-201ENST00000451980 LTN1O94822 1766 aa11.19□□□□□ -0.62
LINC01548-201ENST00000451980 PPP1R18Q6NYC8 613 aa11.19□□□□□ -0.62
LINC01548-201ENST00000451980 SAMD7Q7Z3H4 446 aa11.19□□□□□ -0.62
LINC01548-201ENST00000451980 KRT28Q7Z3Y7 464 aa11.19□□□□□ -0.62
LINC01548-201ENST00000451980 MTRQ99707 1265 aa11.19□□□□□ -0.62
LINC01548-201ENST00000451980 ROBO1Q9Y6N7 1651 aa11.19□□□□□ -0.62
LINC01548-201ENST00000451980 PHRF1Q9P1Y6 1649 aaKnown RBP11.18□□□□□ -0.62
LINC01548-201ENST00000451980 MAP3K7O43318 606 aa11.18□□□□□ -0.62
LINC01548-201ENST00000451980 PSME1Q06323 249 aa11.18□□□□□ -0.62
LINC01548-201ENST00000451980 NUTM2GQ5VZR2 741 aa11.18□□□□□ -0.62
LINC01548-201ENST00000451980 FAM9BQ8IZU0 186 aa11.18□□□□□ -0.62
LINC01548-201ENST00000451980 COG3Q96JB2 828 aa11.18□□□□□ -0.62
LINC01548-201ENST00000451980 YTHDC1Q96MU7 727 aaKnown RBP11.18□□□□□ -0.62
LINC01548-201ENST00000451980 EMILIN1Q9Y6C2 1016 aa11.18□□□□□ -0.62
LINC01548-201ENST00000451980 BLMP54132 1417 aaPredicted RBP11.18□□□□□ -0.62
LINC01548-201ENST00000451980 SBNO1A3KN83 1393 aa11.17□□□□□ -0.62
LINC01548-201ENST00000451980 USP19O94966 1318 aa11.17□□□□□ -0.62
LINC01548-201ENST00000451980 SOS2Q07890 1332 aaPredicted RBP11.17□□□□□ -0.62
LINC01548-201ENST00000451980 NBR1Q14596 966 aa11.17□□□□□ -0.62
LINC01548-201ENST00000451980 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.17□□□□□ -0.62
LINC01548-201ENST00000451980 RGPD1P0DJD0 1748 aa11.17□□□□□ -0.62
LINC01548-201ENST00000451980 ABCA3Q99758 1704 aa11.17□□□□□ -0.62
LINC01548-201ENST00000451980 CDK12Q9NYV4 1490 aaPredicted RBP11.17□□□□□ -0.62
LINC01548-201ENST00000451980 AHDC1Q5TGY3 1603 aaPredicted RBP11.17□□□□□ -0.62
LINC01548-201ENST00000451980 COL18A1P39060 1754 aa11.16□□□□□ -0.62
LINC01548-201ENST00000451980 RRS1Q15050 365 aaKnown RBP11.16□□□□□ -0.62
LINC01548-201ENST00000451980 TSR1Q2NL82 804 aaKnown RBP11.16□□□□□ -0.62
LINC01548-201ENST00000451980 ABTB2Q8N961 1025 aa11.16□□□□□ -0.62
LINC01548-201ENST00000451980 CERKQ8TCT0 537 aa11.16□□□□□ -0.62
LINC01548-201ENST00000451980 TNS3Q68CZ2 1445 aa11.16□□□□□ -0.62
LINC01548-201ENST00000451980 RGPD5Q99666 1765 aa11.16□□□□□ -0.62
LINC01548-201ENST00000451980 MAP3K19Q56UN5 1328 aa11.15□□□□□ -0.62
LINC01548-201ENST00000451980 SPATA31A3Q5VYP0 1347 aa11.15□□□□□ -0.62
LINC01548-201ENST00000451980 NPHP3Q7Z494 1330 aa11.15□□□□□ -0.62
LINC01548-201ENST00000451980 PRSS12P56730 875 aa11.15□□□□□ -0.62
LINC01548-201ENST00000451980 CDCA7LQ96GN5 454 aa11.15□□□□□ -0.62
LINC01548-201ENST00000451980 ADAMTS8Q9UP79 889 aa11.15□□□□□ -0.62
LINC01548-201ENST00000451980 IQSEC2Q5JU85 1478 aa11.14□□□□□ -0.63
LINC01548-201ENST00000451980 ZNF787Q6DD87 383 aa11.14□□□□□ -0.63
LINC01548-201ENST00000451980 RGPD2P0DJD1 1756 aa11.13□□□□□ -0.63
LINC01548-201ENST00000451980 COL16A1Q07092 1604 aaPredicted RBP11.13□□□□□ -0.63
LINC01548-201ENST00000451980 SENP3-EIF4A1A0A087X0R7 540 aa11.12□□□□□ -0.63
LINC01548-201ENST00000451980 IL13P35225 146 aa11.12□□□□□ -0.63
LINC01548-201ENST00000451980 PDIA6Q15084 440 aa11.12□□□□□ -0.63
LINC01548-201ENST00000451980 PDZRN3Q9UPQ7 1066 aa11.12□□□□□ -0.63
LINC01548-201ENST00000451980 SPDYE16A6NNV3 312 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms