RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 ARXQ96QS3 562 aa16.61■□□□□ 0.25
CSNK1E-211ENST00000451964 MSH5O43196 834 aa16.6■□□□□ 0.25
CSNK1E-211ENST00000451964 AK7Q96M32 723 aa16.6■□□□□ 0.25
CSNK1E-211ENST00000451964 RBM42Q9BTD8 480 aaKnown RBP16.6■□□□□ 0.25
CSNK1E-211ENST00000451964 FHDC1Q9C0D6 1143 aaPredicted RBP16.6■□□□□ 0.25
CSNK1E-211ENST00000451964 RNMTO43148 476 aaKnown RBP16.59■□□□□ 0.25
CSNK1E-211ENST00000451964 HMGB2P26583 209 aaKnown RBP16.59■□□□□ 0.25
CSNK1E-211ENST00000451964 PHACTR3Q96KR7 559 aa16.59■□□□□ 0.25
CSNK1E-211ENST00000451964 SYT17Q9BSW7 474 aa16.59■□□□□ 0.25
CSNK1E-211ENST00000451964 PTCD1O75127 700 aaKnown RBP16.58■□□□□ 0.24
CSNK1E-211ENST00000451964 RSPH6AQ9H0K4 717 aa16.58■□□□□ 0.24
CSNK1E-211ENST00000451964 SLC52A2Q9HAB3 445 aa16.58■□□□□ 0.24
CSNK1E-211ENST00000451964 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.57■□□□□ 0.24
CSNK1E-211ENST00000451964 PHF14O94880 888 aa16.57■□□□□ 0.24
CSNK1E-211ENST00000451964 PRKAR2BP31323 418 aa16.57■□□□□ 0.24
CSNK1E-211ENST00000451964 DDX10Q13206 875 aaKnown RBP16.57■□□□□ 0.24
CSNK1E-211ENST00000451964 MSL1Q68DK7 614 aa16.57■□□□□ 0.24
CSNK1E-211ENST00000451964 FLAD1Q8NFF5 587 aa16.57■□□□□ 0.24
CSNK1E-211ENST00000451964 C5P01031 1676 aa16.56■□□□□ 0.24
CSNK1E-211ENST00000451964 GNPATO15228 680 aa16.56■□□□□ 0.24
CSNK1E-211ENST00000451964 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
CSNK1E-211ENST00000451964 POLD1P28340 1107 aa16.56■□□□□ 0.24
CSNK1E-211ENST00000451964 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
CSNK1E-211ENST00000451964 IL17REQ8NFR9 667 aa16.56■□□□□ 0.24
CSNK1E-211ENST00000451964 NUDCQ9Y266 331 aa16.56■□□□□ 0.24
CSNK1E-211ENST00000451964 TUBGCP6Q96RT7 1819 aa16.56■□□□□ 0.24
CSNK1E-211ENST00000451964 C4BP0C0L5 1744 aa16.56■□□□□ 0.24
CSNK1E-211ENST00000451964 SSFA2P28290 1259 aa16.55■□□□□ 0.24
CSNK1E-211ENST00000451964 QSER1Q2KHR3 1735 aa16.55■□□□□ 0.24
CSNK1E-211ENST00000451964 SLC39A6Q13433 755 aa16.54■□□□□ 0.24
CSNK1E-211ENST00000451964 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
CSNK1E-211ENST00000451964 GNAT3A8MTJ3 354 aa16.53■□□□□ 0.24
CSNK1E-211ENST00000451964 RC3H1Q5TC82 1133 aaKnown RBP16.53■□□□□ 0.24
CSNK1E-211ENST00000451964 TAF1LQ8IZX4 1826 aa16.53■□□□□ 0.24
CSNK1E-211ENST00000451964 MAP3K5Q99683 1374 aa16.52■□□□□ 0.24
CSNK1E-211ENST00000451964 FCHSD2O94868 740 aa16.52■□□□□ 0.24
CSNK1E-211ENST00000451964 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
CSNK1E-211ENST00000451964 MRC1P22897 1456 aa16.51■□□□□ 0.23
CSNK1E-211ENST00000451964 RPS6KA4O75676 772 aa16.5■□□□□ 0.23
CSNK1E-211ENST00000451964 TRAPPC3LQ5T215 181 aa16.5■□□□□ 0.23
CSNK1E-211ENST00000451964 DNAJC10Q8IXB1 793 aa16.5■□□□□ 0.23
CSNK1E-211ENST00000451964 KLHL34Q8N239 644 aa16.5■□□□□ 0.23
CSNK1E-211ENST00000451964 ARHGEF1Q92888 912 aaKnown RBP16.5■□□□□ 0.23
CSNK1E-211ENST00000451964 RTCBQ9Y3I0 505 aaKnown RBP16.5■□□□□ 0.23
CSNK1E-211ENST00000451964 CRKLP46109 303 aaKnown RBP16.49■□□□□ 0.23
CSNK1E-211ENST00000451964 RALBP1Q15311 655 aa16.49■□□□□ 0.23
CSNK1E-211ENST00000451964 COL24A1Q17RW2 1714 aa16.49■□□□□ 0.23
CSNK1E-211ENST00000451964 INTS5Q6P9B9 1019 aaKnown RBP16.49■□□□□ 0.23
CSNK1E-211ENST00000451964 NLGN2Q8NFZ4 835 aa16.49■□□□□ 0.23
CSNK1E-211ENST00000451964 SCN11AQ9UI33 1791 aa16.49■□□□□ 0.23
CSNK1E-211ENST00000451964 UTRNP46939 3433 aa16.48■□□□□ 0.23
CSNK1E-211ENST00000451964 ADAMTS7Q9UKP4 1686 aa16.48■□□□□ 0.23
CSNK1E-211ENST00000451964 CEMIPQ8WUJ3 1361 aa16.48■□□□□ 0.23
CSNK1E-211ENST00000451964 TEFQ10587 303 aa16.47■□□□□ 0.23
CSNK1E-211ENST00000451964 UBR3Q6ZT12 1888 aa16.47■□□□□ 0.23
CSNK1E-211ENST00000451964 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
CSNK1E-211ENST00000451964 CYP19A1P11511 503 aaPredicted RBP16.46■□□□□ 0.23
CSNK1E-211ENST00000451964 ADRA2BP18089 450 aa16.46■□□□□ 0.23
CSNK1E-211ENST00000451964 PLEKHF1Q96S99 279 aa16.46■□□□□ 0.23
CSNK1E-211ENST00000451964 ZNF831Q5JPB2 1677 aa16.46■□□□□ 0.23
CSNK1E-211ENST00000451964 KCPQ6ZWJ8 1503 aa16.45■□□□□ 0.22
CSNK1E-211ENST00000451964 KCNQ3O43525 872 aa16.45■□□□□ 0.22
CSNK1E-211ENST00000451964 DCTN1Q14203 1278 aa16.45■□□□□ 0.22
CSNK1E-211ENST00000451964 ZNF790Q6PG37 636 aa16.45■□□□□ 0.22
CSNK1E-211ENST00000451964 MCM10Q7L590 875 aa16.45■□□□□ 0.22
CSNK1E-211ENST00000451964 VSIG10Q8N0Z9 540 aa16.45■□□□□ 0.22
CSNK1E-211ENST00000451964 ZNF496Q96IT1 587 aaPredicted RBP16.45■□□□□ 0.22
CSNK1E-211ENST00000451964 GYS1P13807 737 aa16.44■□□□□ 0.22
CSNK1E-211ENST00000451964 RFC4P35249 363 aa16.44■□□□□ 0.22
CSNK1E-211ENST00000451964 ZEB1P37275 1124 aaPredicted RBP16.44■□□□□ 0.22
CSNK1E-211ENST00000451964 MMP10P09238 476 aa16.43■□□□□ 0.22
CSNK1E-211ENST00000451964 TTC5Q8N0Z6 440 aa16.43■□□□□ 0.22
CSNK1E-211ENST00000451964 NLGN1Q8N2Q7 840 aa16.43■□□□□ 0.22
CSNK1E-211ENST00000451964 CCDC87Q9NVE4 849 aa16.43■□□□□ 0.22
CSNK1E-211ENST00000451964 SRP68Q9UHB9 627 aaKnown RBP16.43■□□□□ 0.22
CSNK1E-211ENST00000451964 CD2APQ9Y5K6 639 aa16.43■□□□□ 0.22
CSNK1E-211ENST00000451964 COL5A3P25940 1745 aaPredicted RBP16.42■□□□□ 0.22
CSNK1E-211ENST00000451964 BTBD11A6QL63 1104 aa16.42■□□□□ 0.22
CSNK1E-211ENST00000451964 HTATSF1O43719 755 aaKnown RBP16.42■□□□□ 0.22
CSNK1E-211ENST00000451964 RTF1Q92541 710 aaKnown RBP16.42■□□□□ 0.22
CSNK1E-211ENST00000451964 ZBTB1Q9Y2K1 713 aa16.42■□□□□ 0.22
CSNK1E-211ENST00000451964 MYH14Q7Z406 1995 aaKnown RBP16.42■□□□□ 0.22
CSNK1E-211ENST00000451964 MYBBP1AQ9BQG0 1328 aaKnown RBP16.42■□□□□ 0.22
CSNK1E-211ENST00000451964 TJP1Q07157 1748 aa16.42■□□□□ 0.22
CSNK1E-211ENST00000451964 GPR162Q16538 588 aa16.41■□□□□ 0.22
CSNK1E-211ENST00000451964 SOS1Q07889 1333 aaPredicted RBP16.41■□□□□ 0.22
CSNK1E-211ENST00000451964 GOLGB1Q14789 3259 aaKnown RBP16.41■□□□□ 0.22
CSNK1E-211ENST00000451964 HEG1Q9ULI3 1381 aa16.4■□□□□ 0.22
CSNK1E-211ENST00000451964 FKBP8Q14318 412 aa16.4■□□□□ 0.22
CSNK1E-211ENST00000451964 USP42Q9H9J4 1324 aaKnown RBP16.4■□□□□ 0.22
CSNK1E-211ENST00000451964 CICQ96RK0 1608 aaPredicted RBP16.39■□□□□ 0.21
CSNK1E-211ENST00000451964 YY1P25490 414 aa16.39■□□□□ 0.21
CSNK1E-211ENST00000451964 FMNL2Q96PY5 1086 aa16.39■□□□□ 0.21
CSNK1E-211ENST00000451964 PRKRIP1Q9H875 184 aaPredicted RBP16.39■□□□□ 0.21
CSNK1E-211ENST00000451964 STARD3NLO95772 234 aa16.38■□□□□ 0.21
CSNK1E-211ENST00000451964 YBX3P16989 372 aaKnown RBP eCLIP16.38■□□□□ 0.213e-7■□□□□ 10.1
CSNK1E-211ENST00000451964 CANXP27824 592 aaKnown RBP16.38■□□□□ 0.21
CSNK1E-211ENST00000451964 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
CSNK1E-211ENST00000451964 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
CSNK1E-211ENST00000451964 MIS18AQ9NYP9 233 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms