RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 NCOA4Q13772 614 aa8.95□□□□□ -0.98
GTF3C3-207ENST00000451088 RNFT1Q5M7Z0 435 aa8.95□□□□□ -0.98
GTF3C3-207ENST00000451088 TIMMDC1Q9NPL8 285 aa8.95□□□□□ -0.98
GTF3C3-207ENST00000451088 TLR1Q15399 786 aa8.94□□□□□ -0.98
GTF3C3-207ENST00000451088 DBN1Q16643 649 aa8.94□□□□□ -0.98
GTF3C3-207ENST00000451088 PPARGC1BQ86YN6 1023 aaKnown RBP8.94□□□□□ -0.98
GTF3C3-207ENST00000451088 PLEKHM2Q8IWE5 1019 aa8.94□□□□□ -0.98
GTF3C3-207ENST00000451088 ZNF837Q96EG3 531 aaPredicted RBP8.94□□□□□ -0.98
GTF3C3-207ENST00000451088 SLC4A9Q96Q91 983 aa8.94□□□□□ -0.98
GTF3C3-207ENST00000451088 NOD1Q9Y239 953 aa8.94□□□□□ -0.98
GTF3C3-207ENST00000451088 C4orf17Q53FE4 359 aa8.93□□□□□ -0.98
GTF3C3-207ENST00000451088 GNASQ5JWF2 1037 aa8.93□□□□□ -0.98
GTF3C3-207ENST00000451088 TMEM214Q6NUQ4 689 aaKnown RBP8.93□□□□□ -0.98
GTF3C3-207ENST00000451088 TBC1D9Q6ZT07 1266 aa8.93□□□□□ -0.98
GTF3C3-207ENST00000451088 RHBDD1Q8TEB9 315 aa8.93□□□□□ -0.98
GTF3C3-207ENST00000451088 CNTNAP3BQ96NU0 1288 aa8.93□□□□□ -0.98
GTF3C3-207ENST00000451088 CNTNAP3Q9BZ76 1288 aa8.93□□□□□ -0.98
GTF3C3-207ENST00000451088 H7C1W4 665 aa8.92□□□□□ -0.98
GTF3C3-207ENST00000451088 F11P03951 625 aa8.92□□□□□ -0.98
GTF3C3-207ENST00000451088 GTF2E1P29083 439 aaPredicted RBP8.92□□□□□ -0.98
GTF3C3-207ENST00000451088 SMTNP53814 917 aa8.92□□□□□ -0.98
GTF3C3-207ENST00000451088 GTF2IP78347 998 aa8.92□□□□□ -0.98
GTF3C3-207ENST00000451088 MTFR1Q15390 333 aa8.92□□□□□ -0.98
GTF3C3-207ENST00000451088 DEPDC4Q8N2C3 294 aa8.92□□□□□ -0.98
GTF3C3-207ENST00000451088 GLMNQ92990 594 aa8.92□□□□□ -0.98
GTF3C3-207ENST00000451088 GAS2L1Q99501 681 aaPredicted RBP8.92□□□□□ -0.98
GTF3C3-207ENST00000451088 A0A1B0GTH6 734 aa8.91□□□□□ -0.98
GTF3C3-207ENST00000451088 ATP9BO43861 1147 aa8.91□□□□□ -0.98
GTF3C3-207ENST00000451088 RIPOR1Q6ZS17 1223 aa8.91□□□□□ -0.98
GTF3C3-207ENST00000451088 USP17L3A6NCW0 530 aa8.9□□□□□ -0.98
GTF3C3-207ENST00000451088 USP17L4A6NCW7 530 aa8.9□□□□□ -0.98
GTF3C3-207ENST00000451088 FAM181BA6NEQ2 426 aa8.9□□□□□ -0.98
GTF3C3-207ENST00000451088 PHKA2P46019 1235 aa8.9□□□□□ -0.98
GTF3C3-207ENST00000451088 GAS6Q14393 721 aa8.9□□□□□ -0.98
GTF3C3-207ENST00000451088 USP17L2Q6R6M4 530 aa8.9□□□□□ -0.98
GTF3C3-207ENST00000451088 USP17L1Q7RTZ2 530 aa8.9□□□□□ -0.98
GTF3C3-207ENST00000451088 ZNF295-AS1Q8N0V1 137 aa8.9□□□□□ -0.98
GTF3C3-207ENST00000451088 THBS1P07996 1170 aa8.89□□□□□ -0.99
GTF3C3-207ENST00000451088 SLURP2P0DP57 97 aa8.89□□□□□ -0.99
GTF3C3-207ENST00000451088 IQSEC3Q9UPP2 1182 aaPredicted RBP8.89□□□□□ -0.99
GTF3C3-207ENST00000451088 A6NJY4 79 aa8.88□□□□□ -0.99
GTF3C3-207ENST00000451088 CDK2AP1O14519 115 aa8.88□□□□□ -0.99
GTF3C3-207ENST00000451088 TRIM50Q86XT4 487 aa8.88□□□□□ -0.99
GTF3C3-207ENST00000451088 SERTAD1Q9UHV2 236 aa8.88□□□□□ -0.99
GTF3C3-207ENST00000451088 ZBTB7BO15156 539 aaPredicted RBP8.87□□□□□ -0.99
GTF3C3-207ENST00000451088 LBRQ14739 615 aaKnown RBP8.87□□□□□ -0.99
GTF3C3-207ENST00000451088 FOXR1Q6PIV2 292 aa8.87□□□□□ -0.99
GTF3C3-207ENST00000451088 NUCKS1Q9H1E3 243 aaKnown RBP8.87□□□□□ -0.99
GTF3C3-207ENST00000451088 ZNF358Q9NW07 568 aa8.87□□□□□ -0.99
GTF3C3-207ENST00000451088 BACH1O14867 736 aa8.86□□□□□ -0.99
GTF3C3-207ENST00000451088 MSX1P28360 303 aa8.86□□□□□ -0.99
GTF3C3-207ENST00000451088 CLDN10P78369 228 aa8.86□□□□□ -0.99
GTF3C3-207ENST00000451088 SRSF11Q05519 484 aaKnown RBP8.86□□□□□ -0.99
GTF3C3-207ENST00000451088 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.86□□□□□ -0.99
GTF3C3-207ENST00000451088 GTPBP3Q969Y2 492 aaKnown RBP8.86□□□□□ -0.99
GTF3C3-207ENST00000451088 NIFKQ9BYG3 293 aaKnown RBP8.86□□□□□ -0.99
GTF3C3-207ENST00000451088 GPAMQ9HCL2 828 aa8.86□□□□□ -0.99
GTF3C3-207ENST00000451088 GPR25O00155 361 aa8.85□□□□□ -0.99
GTF3C3-207ENST00000451088 PLA2G4AP47712 749 aa8.85□□□□□ -0.99
GTF3C3-207ENST00000451088 ATP1A2P50993 1020 aa8.85□□□□□ -0.99
GTF3C3-207ENST00000451088 PSME1Q06323 249 aa8.85□□□□□ -0.99
GTF3C3-207ENST00000451088 UBAP2LQ14157 1087 aaKnown RBP8.85□□□□□ -0.99
GTF3C3-207ENST00000451088 CRISPLD1Q9H336 500 aa8.85□□□□□ -0.99
GTF3C3-207ENST00000451088 TFIP11Q9UBB9 837 aaKnown RBP8.85□□□□□ -0.99
GTF3C3-207ENST00000451088 MKRN1Q9UHC7 482 aaKnown RBP8.85□□□□□ -0.99
GTF3C3-207ENST00000451088 KIAA1024Q9UPX6 916 aa8.85□□□□□ -0.99
GTF3C3-207ENST00000451088 USP3Q9Y6I4 520 aa8.85□□□□□ -0.99
GTF3C3-207ENST00000451088 EPHA4P54764 986 aa8.84□□□□□ -0.99
GTF3C3-207ENST00000451088 FOXK2Q01167 660 aa8.84□□□□□ -0.99
GTF3C3-207ENST00000451088 ZNF385CQ66K41 422 aaPredicted RBP8.84□□□□□ -0.99
GTF3C3-207ENST00000451088 LARGE2Q8N3Y3 721 aa8.84□□□□□ -0.99
GTF3C3-207ENST00000451088 C1orf216Q8TAB5 229 aa8.84□□□□□ -0.99
GTF3C3-207ENST00000451088 CALR3Q96L12 384 aaKnown RBP8.84□□□□□ -0.99
GTF3C3-207ENST00000451088 MBIPQ9NS73 344 aa8.84□□□□□ -0.99
GTF3C3-207ENST00000451088 MAFBQ9Y5Q3 323 aaPredicted RBP8.84□□□□□ -0.99
GTF3C3-207ENST00000451088 CCDC180Q9P1Z9 1646 aa8.83□□□□□ -1
GTF3C3-207ENST00000451088 PALM3A6NDB9 673 aaPredicted RBP8.83□□□□□ -1
GTF3C3-207ENST00000451088 ADAMTS2O95450 1211 aa8.83□□□□□ -1
GTF3C3-207ENST00000451088 ATP4AP20648 1035 aa8.83□□□□□ -1
GTF3C3-207ENST00000451088 CCDC102BQ68D86 513 aa8.83□□□□□ -1
GTF3C3-207ENST00000451088 SIX5Q8N196 739 aa8.83□□□□□ -1
GTF3C3-207ENST00000451088 OGFOD1Q8N543 542 aa8.83□□□□□ -1
GTF3C3-207ENST00000451088 TRERF1Q96PN7 1200 aa8.83□□□□□ -1
GTF3C3-207ENST00000451088 PPP1R12CQ9BZL4 782 aa8.83□□□□□ -1
GTF3C3-207ENST00000451088 RUBCNLQ9H714 662 aa8.83□□□□□ -1
GTF3C3-207ENST00000451088 DNAAF2Q9NVR5 837 aaKnown RBP8.83□□□□□ -1
GTF3C3-207ENST00000451088 SCHIP1Q9P0W5 487 aaPredicted RBP8.83□□□□□ -1
GTF3C3-207ENST00000451088 DKK1O94907 266 aa8.82□□□□□ -1
GTF3C3-207ENST00000451088 CSB-PGBD3P0DP91 1061 aa8.82□□□□□ -1
GTF3C3-207ENST00000451088 PGBD3Q8N328 593 aa8.82□□□□□ -1
GTF3C3-207ENST00000451088 CFHR5Q9BXR6 569 aa8.82□□□□□ -1
GTF3C3-207ENST00000451088 M0R2N6 131 aa8.81□□□□□ -1
GTF3C3-207ENST00000451088 TPCN2Q8NHX9 752 aa8.81□□□□□ -1
GTF3C3-207ENST00000451088 WHAMMQ8TF30 809 aa8.81□□□□□ -1
GTF3C3-207ENST00000451088 EFHC2Q5JST6 749 aa8.8□□□□□ -1
GTF3C3-207ENST00000451088 ZDHHC3Q9NYG2 299 aa8.8□□□□□ -1
GTF3C3-207ENST00000451088 IGF1RP08069 1367 aa8.79□□□□□ -1
GTF3C3-207ENST00000451088 ARHGEF15O94989 841 aa8.79□□□□□ -1
GTF3C3-207ENST00000451088 TEAD4Q15561 434 aa8.79□□□□□ -1
GTF3C3-207ENST00000451088 NBPF1Q3BBV0 1214 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms