RNA–Protein interactions for RNA: ENST00000450923.5

CHRD-206, Transcript of chordin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHRD, Length 3,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-206ENST00000450923 C9orf78Q9NZ63 289 aaPredicted RBP18.34■□□□□ 0.53
CHRD-206ENST00000450923 MON2Q7Z3U7 1717 aa18.33■□□□□ 0.53
CHRD-206ENST00000450923 EIF5BO60841 1220 aaKnown RBP18.33■□□□□ 0.53
CHRD-206ENST00000450923 SLAIN2Q9P270 581 aa18.33■□□□□ 0.52
CHRD-206ENST00000450923 HMMRO75330 724 aa18.33■□□□□ 0.52
CHRD-206ENST00000450923 NUCB1Q02818 461 aa18.33■□□□□ 0.52
CHRD-206ENST00000450923 RILPL2Q969X0 211 aa18.33■□□□□ 0.52
CHRD-206ENST00000450923 ABCC4O15439 1325 aa18.33■□□□□ 0.52
CHRD-206ENST00000450923 KNDC1Q76NI1 1749 aa18.32■□□□□ 0.52
CHRD-206ENST00000450923 C22orf23Q9BZE7 217 aa18.32■□□□□ 0.52
CHRD-206ENST00000450923 GNAI2P04899 355 aa18.32■□□□□ 0.52
CHRD-206ENST00000450923 PIP4K2BP78356 416 aa18.32■□□□□ 0.52
CHRD-206ENST00000450923 BECN1Q14457 450 aa18.32■□□□□ 0.52
CHRD-206ENST00000450923 AKAP4Q5JQC9 854 aa18.32■□□□□ 0.52
CHRD-206ENST00000450923 GCC1Q96CN9 775 aa18.31■□□□□ 0.52
CHRD-206ENST00000450923 MAP4K4O95819 1239 aaPredicted RBP18.31■□□□□ 0.52
CHRD-206ENST00000450923 RNMTO43148 476 aaKnown RBP18.31■□□□□ 0.52
CHRD-206ENST00000450923 BRPF3Q9ULD4 1205 aa18.31■□□□□ 0.52
CHRD-206ENST00000450923 KIAA0232Q92628 1395 aa18.3■□□□□ 0.52
CHRD-206ENST00000450923 PEAK1Q9H792 1746 aa18.3■□□□□ 0.52
CHRD-206ENST00000450923 KDM4FA0A1W2PPD8 638 aa18.3■□□□□ 0.52
CHRD-206ENST00000450923 SURF6O75683 361 aaKnown RBP18.3■□□□□ 0.52
CHRD-206ENST00000450923 PROSER3Q2NL68 480 aa18.3■□□□□ 0.52
CHRD-206ENST00000450923 AMOTQ4VCS5 1084 aa18.3■□□□□ 0.52
CHRD-206ENST00000450923 CEP85Q6P2H3 762 aa18.3■□□□□ 0.52
CHRD-206ENST00000450923 C1orf167Q5SNV9 1468 aa18.3■□□□□ 0.52
CHRD-206ENST00000450923 ERBB3P21860 1342 aa18.3■□□□□ 0.52
CHRD-206ENST00000450923 NUTM2BA6NNL0 878 aaPredicted RBP18.3■□□□□ 0.52
CHRD-206ENST00000450923 NUTM2EB1AL46 878 aaPredicted RBP18.3■□□□□ 0.52
CHRD-206ENST00000450923 CCT4P50991 539 aaKnown RBP18.3■□□□□ 0.52
CHRD-206ENST00000450923 NUTM2AQ8IVF1 878 aaPredicted RBP18.3■□□□□ 0.52
CHRD-206ENST00000450923 PTPRCP08575 1304 aa18.29■□□□□ 0.52
CHRD-206ENST00000450923 ADAMTS2O95450 1211 aa18.29■□□□□ 0.52
CHRD-206ENST00000450923 CWF19L2Q2TBE0 894 aaKnown RBP18.29■□□□□ 0.52
CHRD-206ENST00000450923 BRINP3Q76B58 766 aa18.29■□□□□ 0.52
CHRD-206ENST00000450923 RIC3Q7Z5B4 369 aa18.29■□□□□ 0.52
CHRD-206ENST00000450923 SRCIN1Q9C0H9 1055 aa18.29■□□□□ 0.52
CHRD-206ENST00000450923 AKAP12Q02952 1782 aa18.29■□□□□ 0.52
CHRD-206ENST00000450923 CHMP3Q9Y3E7 222 aa18.29■□□□□ 0.52
CHRD-206ENST00000450923 CRB1P82279 1406 aa18.29■□□□□ 0.52
CHRD-206ENST00000450923 CABP4P57796 275 aa18.28■□□□□ 0.52
CHRD-206ENST00000450923 KDRP35968 1356 aa18.28■□□□□ 0.52
CHRD-206ENST00000450923 PNMA6EA0A0J9YXQ4 647 aa18.28■□□□□ 0.52
CHRD-206ENST00000450923 SRGAP3O43295 1099 aa18.28■□□□□ 0.52
CHRD-206ENST00000450923 EIF4A1P60842 406 aaKnown RBP18.28■□□□□ 0.52
CHRD-206ENST00000450923 INTS3Q68E01 1043 aaKnown RBP18.28■□□□□ 0.52
CHRD-206ENST00000450923 SPG7Q9UQ90 795 aa18.27■□□□□ 0.52
CHRD-206ENST00000450923 DLG5Q8TDM6 1919 aa18.27■□□□□ 0.52
CHRD-206ENST00000450923 SIL1Q9H173 461 aa18.27■□□□□ 0.52
CHRD-206ENST00000450923 PIK3C2AO00443 1686 aa18.27■□□□□ 0.51
CHRD-206ENST00000450923 NOL8Q76FK4 1167 aaKnown RBP18.27■□□□□ 0.51
CHRD-206ENST00000450923 MAP3K2Q9Y2U5 619 aa18.27■□□□□ 0.51
CHRD-206ENST00000450923 NBPF7P0C2Y1 421 aaPredicted RBP18.26■□□□□ 0.51
CHRD-206ENST00000450923 NUTM1Q86Y26 1132 aa18.26■□□□□ 0.51
CHRD-206ENST00000450923 GNAI3P08754 354 aa18.25■□□□□ 0.51
CHRD-206ENST00000450923 ANKRD44Q8N8A2 993 aa18.25■□□□□ 0.51
CHRD-206ENST00000450923 HTATSF1O43719 755 aaKnown RBP18.25■□□□□ 0.51
CHRD-206ENST00000450923 RPAP2Q8IXW5 612 aaPredicted RBP18.25■□□□□ 0.51
CHRD-206ENST00000450923 DNAAF4Q8WXU2 420 aa18.24■□□□□ 0.51
CHRD-206ENST00000450923 NALCNQ8IZF0 1738 aa18.23■□□□□ 0.51
CHRD-206ENST00000450923 ATP5J2-PTCD1G3V325 749 aa18.23■□□□□ 0.51
CHRD-206ENST00000450923 IFNL2Q8IZJ0 200 aa18.23■□□□□ 0.51
CHRD-206ENST00000450923 ZNF496Q96IT1 587 aaPredicted RBP18.23■□□□□ 0.51
CHRD-206ENST00000450923 TBC1D9Q6ZT07 1266 aa18.22■□□□□ 0.51
CHRD-206ENST00000450923 PPP1R42Q7Z4L9 355 aa18.22■□□□□ 0.51
CHRD-206ENST00000450923 DBF4Q9UBU7 674 aaPredicted RBP18.22■□□□□ 0.51
CHRD-206ENST00000450923 DCTPP1Q9H773 170 aa18.22■□□□□ 0.51
CHRD-206ENST00000450923 HSP90AB1P08238 724 aaKnown RBP18.22■□□□□ 0.51
CHRD-206ENST00000450923 BRPF1P55201 1214 aaPredicted RBP18.22■□□□□ 0.51
CHRD-206ENST00000450923 RBM42Q9BTD8 480 aaKnown RBP18.22■□□□□ 0.51
CHRD-206ENST00000450923 RTL1A6NKG5 1358 aa18.22■□□□□ 0.51
CHRD-206ENST00000450923 XRN1Q8IZH2 1706 aaKnown RBP18.21■□□□□ 0.51
CHRD-206ENST00000450923 USP16Q9Y5T5 823 aa18.21■□□□□ 0.51
CHRD-206ENST00000450923 ZNF790Q6PG37 636 aa18.21■□□□□ 0.51
CHRD-206ENST00000450923 LARP1Q6PKG0 1096 aaKnown RBP18.21■□□□□ 0.51
CHRD-206ENST00000450923 HSCBQ8IWL3 235 aa18.21■□□□□ 0.51
CHRD-206ENST00000450923 USP44Q9H0E7 712 aa18.21■□□□□ 0.5
CHRD-206ENST00000450923 COPS6Q7L5N1 327 aa18.2■□□□□ 0.5
CHRD-206ENST00000450923 PLEKHM2Q8IWE5 1019 aa18.2■□□□□ 0.5
CHRD-206ENST00000450923 PA2G4Q9UQ80 394 aaKnown RBP18.2■□□□□ 0.5
CHRD-206ENST00000450923 CCDC85AQ96PX6 553 aaPredicted RBP18.2■□□□□ 0.5
CHRD-206ENST00000450923 LRRCC1Q9C099 1032 aa18.2■□□□□ 0.5
CHRD-206ENST00000450923 GIGYF1O75420 1035 aaPredicted RBP18.19■□□□□ 0.5
CHRD-206ENST00000450923 FRAT2O75474 233 aaPredicted RBP18.19■□□□□ 0.5
CHRD-206ENST00000450923 NFKBIBQ15653 356 aa18.19■□□□□ 0.5
CHRD-206ENST00000450923 CASC1Q6TDU7 716 aa18.19■□□□□ 0.5
CHRD-206ENST00000450923 TBC1D32Q96NH3 1257 aa18.19■□□□□ 0.5
CHRD-206ENST00000450923 BTG4Q9NY30 223 aa18.19■□□□□ 0.5
CHRD-206ENST00000450923 CYP27B1O15528 508 aa18.19■□□□□ 0.5
CHRD-206ENST00000450923 MYD88Q99836 296 aa18.19■□□□□ 0.5
CHRD-206ENST00000450923 TPRNQ4KMQ1 711 aa18.18■□□□□ 0.5
CHRD-206ENST00000450923 XAGE3Q8WTP9 111 aa18.18■□□□□ 0.5
CHRD-206ENST00000450923 CHD2O14647 1828 aaKnown RBP18.18■□□□□ 0.5
CHRD-206ENST00000450923 ADAMTSL3P82987 1691 aa18.18■□□□□ 0.5
CHRD-206ENST00000450923 NEXNQ0ZGT2 675 aa18.18■□□□□ 0.5
CHRD-206ENST00000450923 KLHDC4Q8TBB5 520 aa18.18■□□□□ 0.5
CHRD-206ENST00000450923 TBC1D2Q9BYX2 928 aa18.18■□□□□ 0.5
CHRD-206ENST00000450923 SPATA31A3Q5VYP0 1347 aa18.18■□□□□ 0.5
CHRD-206ENST00000450923 PHKG2P15735 406 aa18.17■□□□□ 0.5
CHRD-206ENST00000450923 GSPT1P15170 499 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms