RNA–Protein interactions for RNA: ENST00000450564.1

IFT172-206, Transcript of intraflagellar transport 172, humanhuman

TSL 3

Gene IFT172, Length 760 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT172-206ENST00000450564 MSH5O43196 834 aa25.68■■□□□ 1.7
IFT172-206ENST00000450564 KDM6AO15550 1401 aaPredicted RBP25.67■■□□□ 1.7
IFT172-206ENST00000450564 CABP4P57796 275 aa25.67■■□□□ 1.7
IFT172-206ENST00000450564 ATP6V1AP38606 617 aa25.66■■□□□ 1.7
IFT172-206ENST00000450564 AKAP4Q5JQC9 854 aa25.65■■□□□ 1.7
IFT172-206ENST00000450564 ZNF831Q5JPB2 1677 aa25.64■■□□□ 1.7
IFT172-206ENST00000450564 SSFA2P28290 1259 aa25.63■■□□□ 1.69
IFT172-206ENST00000450564 HMOX1P09601 288 aa25.62■■□□□ 1.69
IFT172-206ENST00000450564 LINC00116Q8NCU8 138 aa25.62■■□□□ 1.69
IFT172-206ENST00000450564 COL3A1P02461 1466 aaPredicted RBP25.61■■□□□ 1.69
IFT172-206ENST00000450564 CFAP53Q96M91 514 aa25.61■■□□□ 1.69
IFT172-206ENST00000450564 UBR3Q6ZT12 1888 aa25.61■■□□□ 1.69
IFT172-206ENST00000450564 ITPK1Q13572 414 aa25.6■■□□□ 1.69
IFT172-206ENST00000450564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.59■■□□□ 1.69
IFT172-206ENST00000450564 CNGB1Q14028 1251 aaPredicted RBP25.59■■□□□ 1.69
IFT172-206ENST00000450564 SCN11AQ9UI33 1791 aa25.59■■□□□ 1.69
IFT172-206ENST00000450564 NFATC2IPQ8NCF5 419 aa25.58■■□□□ 1.69
IFT172-206ENST00000450564 RBM42Q9BTD8 480 aaKnown RBP25.58■■□□□ 1.69
IFT172-206ENST00000450564 U2SURPO15042 1029 aaKnown RBP25.56■■□□□ 1.68
IFT172-206ENST00000450564 GNPATO15228 680 aa25.56■■□□□ 1.68
IFT172-206ENST00000450564 PHF14O94880 888 aa25.56■■□□□ 1.68
IFT172-206ENST00000450564 RC3H1Q5TC82 1133 aaKnown RBP25.56■■□□□ 1.68
IFT172-206ENST00000450564 KLHL34Q8N239 644 aa25.55■■□□□ 1.68
IFT172-206ENST00000450564 SLC52A2Q9HAB3 445 aa25.55■■□□□ 1.68
IFT172-206ENST00000450564 CNTNAP4Q9C0A0 1308 aa25.55■■□□□ 1.68
IFT172-206ENST00000450564 YY1P25490 414 aa25.54■■□□□ 1.68
IFT172-206ENST00000450564 MTHFSDQ2M296 383 aaKnown RBP25.54■■□□□ 1.68
IFT172-206ENST00000450564 MSL1Q68DK7 614 aa25.54■■□□□ 1.68
IFT172-206ENST00000450564 SLC4A9Q96Q91 983 aa25.54■■□□□ 1.68
IFT172-206ENST00000450564 NUDCQ9Y266 331 aa25.54■■□□□ 1.68
IFT172-206ENST00000450564 RTCBQ9Y3I0 505 aaKnown RBP25.54■■□□□ 1.68
IFT172-206ENST00000450564 RNMTO43148 476 aaKnown RBP25.53■■□□□ 1.68
IFT172-206ENST00000450564 ADRA2BP18089 450 aa25.53■■□□□ 1.68
IFT172-206ENST00000450564 AMIGO3Q86WK7 504 aa25.53■■□□□ 1.68
IFT172-206ENST00000450564 MRC1P22897 1456 aa25.53■■□□□ 1.68
IFT172-206ENST00000450564 GAS2L2Q8NHY3 880 aa25.52■■□□□ 1.68
IFT172-206ENST00000450564 COL5A3P25940 1745 aaPredicted RBP25.51■■□□□ 1.68
IFT172-206ENST00000450564 PPP2R1AP30153 589 aa25.51■■□□□ 1.67
IFT172-206ENST00000450564 PTCD1O75127 700 aaKnown RBP25.5■■□□□ 1.67
IFT172-206ENST00000450564 TRAPPC3LQ5T215 181 aa25.5■■□□□ 1.67
IFT172-206ENST00000450564 CICQ96RK0 1608 aaPredicted RBP25.5■■□□□ 1.67
IFT172-206ENST00000450564 LGR6Q9HBX8 967 aa25.5■■□□□ 1.67
IFT172-206ENST00000450564 ADAMTS7Q9UKP4 1686 aa25.5■■□□□ 1.67
IFT172-206ENST00000450564 CD2APQ9Y5K6 639 aa25.5■■□□□ 1.67
IFT172-206ENST00000450564 RPS6KA4O75676 772 aa25.49■■□□□ 1.67
IFT172-206ENST00000450564 DIEXFQ68CQ4 756 aaKnown RBP25.49■■□□□ 1.67
IFT172-206ENST00000450564 GPR162Q16538 588 aa25.47■■□□□ 1.67
IFT172-206ENST00000450564 VIRMAQ69YN4 1812 aaKnown RBP25.46■■□□□ 1.67
IFT172-206ENST00000450564 GNAT3A8MTJ3 354 aa25.45■■□□□ 1.66
IFT172-206ENST00000450564 SMIM5Q71RC9 77 aa25.45■■□□□ 1.66
IFT172-206ENST00000450564 NLGN1Q8N2Q7 840 aa25.44■■□□□ 1.66
IFT172-206ENST00000450564 NLGN2Q8NFZ4 835 aa25.44■■□□□ 1.66
IFT172-206ENST00000450564 RFC4P35249 363 aa25.43■■□□□ 1.66
IFT172-206ENST00000450564 CRKLP46109 303 aaKnown RBP25.43■■□□□ 1.66
IFT172-206ENST00000450564 ARHGEF1Q92888 912 aaKnown RBP25.43■■□□□ 1.66
IFT172-206ENST00000450564 RSPH6AQ9H0K4 717 aa25.43■■□□□ 1.66
IFT172-206ENST00000450564 FCHSD2O94868 740 aa25.42■■□□□ 1.66
IFT172-206ENST00000450564 PRKAR2BP31323 418 aa25.42■■□□□ 1.66
IFT172-206ENST00000450564 VSIG10Q8N0Z9 540 aa25.42■■□□□ 1.66
IFT172-206ENST00000450564 TJP1Q07157 1748 aa25.42■■□□□ 1.66
IFT172-206ENST00000450564 U2AF1L5P0DN76 240 aaPredicted RBP25.41■■□□□ 1.66
IFT172-206ENST00000450564 U2AF1Q01081 240 aaKnown RBP eCLIP25.41■■□□□ 1.66
IFT172-206ENST00000450564 TEFQ10587 303 aa25.41■■□□□ 1.66
IFT172-206ENST00000450564 MYH14Q7Z406 1995 aaKnown RBP25.41■■□□□ 1.66
IFT172-206ENST00000450564 CHD4Q14839 1912 aa25.41■■□□□ 1.66
IFT172-206ENST00000450564 GRIN3BO60391 1043 aa25.39■■□□□ 1.66
IFT172-206ENST00000450564 SLC39A6Q13433 755 aa25.39■■□□□ 1.66
IFT172-206ENST00000450564 TTC5Q8N0Z6 440 aa25.39■■□□□ 1.66
IFT172-206ENST00000450564 KCPQ6ZWJ8 1503 aa25.38■■□□□ 1.65
IFT172-206ENST00000450564 ANP32CO43423 234 aa25.38■■□□□ 1.65
IFT172-206ENST00000450564 MMP10P09238 476 aa25.38■■□□□ 1.65
IFT172-206ENST00000450564 PELP1Q8IZL8 1130 aaKnown RBP25.38■■□□□ 1.65
IFT172-206ENST00000450564 IL17REQ8NFR9 667 aa25.38■■□□□ 1.65
IFT172-206ENST00000450564 DNAJC10Q8IXB1 793 aa25.37■■□□□ 1.65
IFT172-206ENST00000450564 CCDC87Q9NVE4 849 aa25.37■■□□□ 1.65
IFT172-206ENST00000450564 CEMIPQ8WUJ3 1361 aa25.36■■□□□ 1.65
IFT172-206ENST00000450564 GYS1P13807 737 aa25.36■■□□□ 1.65
IFT172-206ENST00000450564 INTS5Q6P9B9 1019 aaKnown RBP25.36■■□□□ 1.65
IFT172-206ENST00000450564 PHACTR3Q96KR7 559 aa25.36■■□□□ 1.65
IFT172-206ENST00000450564 C4AP0C0L4 1744 aa25.35■■□□□ 1.65
IFT172-206ENST00000450564 CYP19A1P11511 503 aaPredicted RBP25.35■■□□□ 1.65
IFT172-206ENST00000450564 UBR2Q8IWV8 1755 aa25.35■■□□□ 1.65
IFT172-206ENST00000450564 UTRNP46939 3433 aa25.33■■□□□ 1.65
IFT172-206ENST00000450564 NEFMP07197 916 aa25.33■■□□□ 1.65
IFT172-206ENST00000450564 ZNF790Q6PG37 636 aa25.33■■□□□ 1.65
IFT172-206ENST00000450564 RTF1Q92541 710 aaKnown RBP25.33■■□□□ 1.65
IFT172-206ENST00000450564 TEX13AQ9BXU3 409 aaPredicted RBP25.33■■□□□ 1.65
IFT172-206ENST00000450564 USP42Q9H9J4 1324 aaKnown RBP25.33■■□□□ 1.64
IFT172-206ENST00000450564 SIPA1L3O60292 1781 aaPredicted RBP25.32■■□□□ 1.64
IFT172-206ENST00000450564 HTATSF1O43719 755 aaKnown RBP25.32■■□□□ 1.64
IFT172-206ENST00000450564 RALBP1Q15311 655 aa25.32■■□□□ 1.64
IFT172-206ENST00000450564 STARD3NLO95772 234 aa25.31■■□□□ 1.64
IFT172-206ENST00000450564 YBX3P16989 372 aaKnown RBP eCLIP25.31■■□□□ 1.64
IFT172-206ENST00000450564 PARP3Q9Y6F1 533 aa25.31■■□□□ 1.64
IFT172-206ENST00000450564 SOS1Q07889 1333 aaPredicted RBP25.31■■□□□ 1.64
IFT172-206ENST00000450564 PRKRIP1Q9H875 184 aaPredicted RBP25.3■■□□□ 1.64
IFT172-206ENST00000450564 ZPR1O75312 459 aa25.29■■□□□ 1.64
IFT172-206ENST00000450564 TGFB2P61812 414 aa25.29■■□□□ 1.64
IFT172-206ENST00000450564 PNNQ9H307 717 aaKnown RBP25.29■■□□□ 1.64
IFT172-206ENST00000450564 HEG1Q9ULI3 1381 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms