RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CLNS1AP54105 237 aaKnown RBP2.58□□□□□ -2
USP53-202ENST00000450251 ANAPC15P60006 121 aa2.58□□□□□ -2
USP53-202ENST00000450251 CKAP4Q07065 602 aaKnown RBP2.58□□□□□ -2
USP53-202ENST00000450251 DYNC1I2Q13409 638 aaKnown RBP2.58□□□□□ -2
USP53-202ENST00000450251 MAP3K11Q16584 847 aa2.58□□□□□ -2
USP53-202ENST00000450251 DBN1Q16643 649 aa2.58□□□□□ -2
USP53-202ENST00000450251 HDXQ7Z353 690 aa2.58□□□□□ -2
USP53-202ENST00000450251 C10orf67Q8IYJ2 551 aa2.58□□□□□ -2
USP53-202ENST00000450251 CEP57L1Q8IYX8 460 aa2.58□□□□□ -2
USP53-202ENST00000450251 MICALL1Q8N3F8 863 aa2.58□□□□□ -2
USP53-202ENST00000450251 NUP133Q8WUM0 1156 aa2.58□□□□□ -2
USP53-202ENST00000450251 DRC1Q96MC2 740 aa2.58□□□□□ -2
USP53-202ENST00000450251 ZNF396Q96N95 335 aaPredicted RBP2.58□□□□□ -2
USP53-202ENST00000450251 CEP89Q96ST8 783 aa2.58□□□□□ -2
USP53-202ENST00000450251 EIF2AK4Q9P2K8 1649 aaKnown RBP2.58□□□□□ -2
USP53-202ENST00000450251 LRPPRCP42704 1394 aaKnown RBP2.58□□□□□ -2
USP53-202ENST00000450251 HFM1A2PYH4 1435 aa2.58□□□□□ -2
USP53-202ENST00000450251 YEATS2Q9ULM3 1422 aa2.58□□□□□ -2
USP53-202ENST00000450251 ABCC2Q92887 1545 aa2.58□□□□□ -2
USP53-202ENST00000450251 CEP170Q5SW79 1584 aa2.58□□□□□ -2
USP53-202ENST00000450251 H3BQV1 296 aa2.58□□□□□ -2
USP53-202ENST00000450251 MAGEA9P43362 315 aa2.58□□□□□ -2
USP53-202ENST00000450251 SNW1Q13573 536 aaKnown RBP2.58□□□□□ -2
USP53-202ENST00000450251 IFFO2Q5TF58 517 aa2.58□□□□□ -2
USP53-202ENST00000450251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.58□□□□□ -27e-6■□□□□ 11.3
USP53-202ENST00000450251 DHX37Q8IY37 1157 aaKnown RBP2.58□□□□□ -2
USP53-202ENST00000450251 GOLGA1Q92805 767 aa2.58□□□□□ -2
USP53-202ENST00000450251 ZSCAN31Q96LW9 406 aaPredicted RBP2.58□□□□□ -2
USP53-202ENST00000450251 TBC1D2Q9BYX2 928 aa2.58□□□□□ -2
USP53-202ENST00000450251 VCXQ9H320 206 aa2.58□□□□□ -2
USP53-202ENST00000450251 VEZTQ9HBM0 779 aa2.58□□□□□ -2
USP53-202ENST00000450251 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.58□□□□□ -2
USP53-202ENST00000450251 ITGB1BP2Q9UKP3 347 aa2.58□□□□□ -2
USP53-202ENST00000450251 KIF14Q15058 1648 aa2.57□□□□□ -2
USP53-202ENST00000450251 NEBLO76041 1014 aa2.57□□□□□ -2
USP53-202ENST00000450251 CCDC92Q53HC0 331 aaPredicted RBP2.57□□□□□ -2
USP53-202ENST00000450251 MSL1Q68DK7 614 aa2.57□□□□□ -2
USP53-202ENST00000450251 MMS22LQ6ZRQ5 1243 aa2.57□□□□□ -2
USP53-202ENST00000450251 EHBP1Q8NDI1 1231 aa2.57□□□□□ -2
USP53-202ENST00000450251 NUP62CLQ9H1M0 184 aa2.57□□□□□ -2
USP53-202ENST00000450251 LUC7LQ9NQ29 371 aaKnown RBP2.57□□□□□ -2
USP53-202ENST00000450251 DDX19AQ9NUU7 478 aaKnown RBP2.57□□□□□ -2
USP53-202ENST00000450251 USH1CQ9Y6N9 552 aa2.57□□□□□ -2
USP53-202ENST00000450251 FHOD3Q2V2M9 1422 aa2.57□□□□□ -2
USP53-202ENST00000450251 KIAA1107Q9UPP5 1409 aa2.57□□□□□ -2
USP53-202ENST00000450251 PPP1R12AO14974 1030 aaPredicted RBP2.57□□□□□ -2
USP53-202ENST00000450251 NAP1L1P55209 391 aaKnown RBP2.57□□□□□ -2
USP53-202ENST00000450251 FILIP1LQ4L180 1135 aa2.57□□□□□ -2
USP53-202ENST00000450251 CHADLQ6NUI6 762 aa2.57□□□□□ -2
USP53-202ENST00000450251 DZIP1LQ8IYY4 767 aaKnown RBP2.57□□□□□ -2
USP53-202ENST00000450251 BICD2Q8TD16 824 aa2.57□□□□□ -2
USP53-202ENST00000450251 TNMDQ9H2S6 317 aa2.57□□□□□ -2
USP53-202ENST00000450251 FEZ2Q9UHY8 353 aaPredicted RBP2.57□□□□□ -2
USP53-202ENST00000450251 JRKLQ9Y4A0 524 aa2.57□□□□□ -2
USP53-202ENST00000450251 WIZO95785 1651 aa2.57□□□□□ -2
USP53-202ENST00000450251 CAPN2P17655 700 aa2.57□□□□□ -2
USP53-202ENST00000450251 ANKRD1Q15327 319 aa2.57□□□□□ -2
USP53-202ENST00000450251 GPRASP1Q5JY77 1395 aa2.57□□□□□ -2
USP53-202ENST00000450251 FGD6Q6ZV73 1430 aa2.57□□□□□ -2
USP53-202ENST00000450251 CENPHQ9H3R5 247 aa2.57□□□□□ -2
USP53-202ENST00000450251 RABEP2Q9H5N1 569 aa2.57□□□□□ -2
USP53-202ENST00000450251 DONSONQ9NYP3 566 aa2.57□□□□□ -2
USP53-202ENST00000450251 ANAPC4Q9UJX5 808 aa2.57□□□□□ -2
USP53-202ENST00000450251 A0A087WUV0 522 aaPredicted RBP2.57□□□□□ -2
USP53-202ENST00000450251 POTEFA5A3E0 1075 aa2.57□□□□□ -2
USP53-202ENST00000450251 ADCY5O95622 1261 aa2.57□□□□□ -2
USP53-202ENST00000450251 IRX5P78411 483 aaPredicted RBP2.57□□□□□ -2
USP53-202ENST00000450251 ZSCAN26Q16670 478 aa2.57□□□□□ -2
USP53-202ENST00000450251 CCDC121Q6ZUS5 278 aa2.57□□□□□ -2
USP53-202ENST00000450251 REM2Q8IYK8 340 aaPredicted RBP2.57□□□□□ -2
USP53-202ENST00000450251 CCDC47Q96A33 483 aaKnown RBP2.57□□□□□ -2
USP53-202ENST00000450251 RAPGEF2Q9Y4G8 1499 aa2.57□□□□□ -2
USP53-202ENST00000450251 SYCE3A1L190 88 aa2.56□□□□□ -2
USP53-202ENST00000450251 MYO1BO43795 1136 aa2.56□□□□□ -2
USP53-202ENST00000450251 KIF5CO60282 957 aa2.56□□□□□ -2
USP53-202ENST00000450251 CEP104O60308 925 aa2.56□□□□□ -2
USP53-202ENST00000450251 KINO60870 393 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 PSMA5P28066 241 aa2.56□□□□□ -2
USP53-202ENST00000450251 KRT85P78386 507 aa2.56□□□□□ -2
USP53-202ENST00000450251 TMED1Q13445 227 aa2.56□□□□□ -2
USP53-202ENST00000450251 CACNA2D4Q7Z3S7 1137 aa2.56□□□□□ -2
USP53-202ENST00000450251 DZIP1Q86YF9 867 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 ARFGAP2Q8N6H7 521 aa2.56□□□□□ -2
USP53-202ENST00000450251 OTUD6BQ8N6M0 293 aa2.56□□□□□ -2
USP53-202ENST00000450251 ANKS4BQ8N8V4 417 aa2.56□□□□□ -2
USP53-202ENST00000450251 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.56□□□□□ -2
USP53-202ENST00000450251 CCHCR1Q8TD31 782 aa2.56□□□□□ -2
USP53-202ENST00000450251 FBF1Q8TES7 1133 aa2.56□□□□□ -2
USP53-202ENST00000450251 CCDC97Q96F63 343 aaPredicted RBP2.56□□□□□ -2
USP53-202ENST00000450251 ZMAT2Q96NC0 199 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.56□□□□□ -2
USP53-202ENST00000450251 SFPQP23246 707 aaKnown RBP eCLIP2.56□□□□□ -2
USP53-202ENST00000450251 INPP5BP32019 993 aa2.56□□□□□ -2
USP53-202ENST00000450251 PIP4K2BP78356 416 aa2.56□□□□□ -2
USP53-202ENST00000450251 MAP2K1Q02750 393 aaPredicted RBP2.56□□□□□ -2
USP53-202ENST00000450251 TRAF1Q13077 416 aa2.56□□□□□ -2
USP53-202ENST00000450251 SF3A1Q15459 793 aaKnown RBP2.56□□□□□ -2
USP53-202ENST00000450251 GRIPAP1Q4V328 841 aa2.56□□□□□ -2
USP53-202ENST00000450251 MUM1L1Q5H9M0 696 aa2.56□□□□□ -2
USP53-202ENST00000450251 AFAP1L1Q8TED9 768 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms