RNA–Protein interactions for RNA: ENST00000450217.2

TSSC2-201, Transcript of tumor suppressing subtransferable candidate 2 pseudogene, humanhuman

BASIC

Gene TSSC2, Length 709 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC2-201ENST00000450217 ITPK1Q13572 414 aa24.48■■□□□ 1.51
TSSC2-201ENST00000450217 AKAP4Q5JQC9 854 aa24.48■■□□□ 1.51
TSSC2-201ENST00000450217 MAP3K5Q99683 1374 aa24.47■■□□□ 1.51
TSSC2-201ENST00000450217 C4BP0C0L5 1744 aa24.47■■□□□ 1.51
TSSC2-201ENST00000450217 RBM42Q9BTD8 480 aaKnown RBP24.46■■□□□ 1.51
TSSC2-201ENST00000450217 COL3A1P02461 1466 aaPredicted RBP24.45■■□□□ 1.51
TSSC2-201ENST00000450217 PHF14O94880 888 aa24.45■■□□□ 1.5
TSSC2-201ENST00000450217 MSL1Q68DK7 614 aa24.45■■□□□ 1.5
TSSC2-201ENST00000450217 AMIGO3Q86WK7 504 aa24.45■■□□□ 1.5
TSSC2-201ENST00000450217 NFATC2IPQ8NCF5 419 aa24.45■■□□□ 1.5
TSSC2-201ENST00000450217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.44■■□□□ 1.5
TSSC2-201ENST00000450217 U2SURPO15042 1029 aaKnown RBP24.44■■□□□ 1.5
TSSC2-201ENST00000450217 SSFA2P28290 1259 aa24.44■■□□□ 1.5
TSSC2-201ENST00000450217 KLHL34Q8N239 644 aa24.44■■□□□ 1.5
TSSC2-201ENST00000450217 GNPATO15228 680 aa24.43■■□□□ 1.5
TSSC2-201ENST00000450217 SLC4A9Q96Q91 983 aa24.43■■□□□ 1.5
TSSC2-201ENST00000450217 TAF1LQ8IZX4 1826 aa24.42■■□□□ 1.5
TSSC2-201ENST00000450217 MTHFSDQ2M296 383 aaKnown RBP24.42■■□□□ 1.5
TSSC2-201ENST00000450217 SMIM5Q71RC9 77 aa24.42■■□□□ 1.5
TSSC2-201ENST00000450217 CFAP53Q96M91 514 aa24.42■■□□□ 1.5
TSSC2-201ENST00000450217 COL24A1Q17RW2 1714 aa24.41■■□□□ 1.5
TSSC2-201ENST00000450217 PTCD1O75127 700 aaKnown RBP24.39■■□□□ 1.49
TSSC2-201ENST00000450217 PPP2R1AP30153 589 aa24.39■■□□□ 1.49
TSSC2-201ENST00000450217 SLC52A2Q9HAB3 445 aa24.39■■□□□ 1.49
TSSC2-201ENST00000450217 LGR6Q9HBX8 967 aa24.39■■□□□ 1.49
TSSC2-201ENST00000450217 RNMTO43148 476 aaKnown RBP24.38■■□□□ 1.49
TSSC2-201ENST00000450217 YY1P25490 414 aa24.37■■□□□ 1.49
TSSC2-201ENST00000450217 RC3H1Q5TC82 1133 aaKnown RBP24.37■■□□□ 1.49
TSSC2-201ENST00000450217 RTCBQ9Y3I0 505 aaKnown RBP24.36■■□□□ 1.49
TSSC2-201ENST00000450217 CNTNAP4Q9C0A0 1308 aa24.35■■□□□ 1.49
TSSC2-201ENST00000450217 NUDCQ9Y266 331 aa24.35■■□□□ 1.49
TSSC2-201ENST00000450217 NLGN2Q8NFZ4 835 aa24.34■■□□□ 1.49
TSSC2-201ENST00000450217 GAS2L2Q8NHY3 880 aa24.34■■□□□ 1.49
TSSC2-201ENST00000450217 UBR3Q6ZT12 1888 aa24.34■■□□□ 1.49
TSSC2-201ENST00000450217 ZNF831Q5JPB2 1677 aa24.34■■□□□ 1.49
TSSC2-201ENST00000450217 TRAPPC3LQ5T215 181 aa24.33■■□□□ 1.49
TSSC2-201ENST00000450217 MRC1P22897 1456 aa24.32■■□□□ 1.48
TSSC2-201ENST00000450217 RPS6KA4O75676 772 aa24.31■■□□□ 1.48
TSSC2-201ENST00000450217 ADRA2BP18089 450 aa24.31■■□□□ 1.48
TSSC2-201ENST00000450217 GPR162Q16538 588 aa24.31■■□□□ 1.48
TSSC2-201ENST00000450217 SCN11AQ9UI33 1791 aa24.31■■□□□ 1.48
TSSC2-201ENST00000450217 PRKAR2BP31323 418 aa24.3■■□□□ 1.48
TSSC2-201ENST00000450217 SLC39A6Q13433 755 aa24.3■■□□□ 1.48
TSSC2-201ENST00000450217 RSPH6AQ9H0K4 717 aa24.3■■□□□ 1.48
TSSC2-201ENST00000450217 CD2APQ9Y5K6 639 aa24.3■■□□□ 1.48
TSSC2-201ENST00000450217 GNAT3A8MTJ3 354 aa24.29■■□□□ 1.48
TSSC2-201ENST00000450217 U2AF1L5P0DN76 240 aaPredicted RBP24.29■■□□□ 1.48
TSSC2-201ENST00000450217 CRKLP46109 303 aaKnown RBP24.29■■□□□ 1.48
TSSC2-201ENST00000450217 U2AF1Q01081 240 aaKnown RBP eCLIP24.29■■□□□ 1.48
TSSC2-201ENST00000450217 ARHGEF1Q92888 912 aaKnown RBP24.29■■□□□ 1.48
TSSC2-201ENST00000450217 PELP1Q8IZL8 1130 aaKnown RBP24.28■■□□□ 1.48
TSSC2-201ENST00000450217 RFC4P35249 363 aa24.27■■□□□ 1.48
TSSC2-201ENST00000450217 PHACTR3Q96KR7 559 aa24.27■■□□□ 1.48
TSSC2-201ENST00000450217 IL17REQ8NFR9 667 aa24.26■■□□□ 1.47
TSSC2-201ENST00000450217 ADAMTS7Q9UKP4 1686 aa24.26■■□□□ 1.47
TSSC2-201ENST00000450217 COL5A3P25940 1745 aaPredicted RBP24.25■■□□□ 1.47
TSSC2-201ENST00000450217 TEFQ10587 303 aa24.25■■□□□ 1.47
TSSC2-201ENST00000450217 DNAJC10Q8IXB1 793 aa24.25■■□□□ 1.47
TSSC2-201ENST00000450217 NLGN1Q8N2Q7 840 aa24.25■■□□□ 1.47
TSSC2-201ENST00000450217 FCHSD2O94868 740 aa24.24■■□□□ 1.47
TSSC2-201ENST00000450217 MMP10P09238 476 aa24.24■■□□□ 1.47
TSSC2-201ENST00000450217 INTS5Q6P9B9 1019 aaKnown RBP24.23■■□□□ 1.47
TSSC2-201ENST00000450217 TTC5Q8N0Z6 440 aa24.23■■□□□ 1.47
TSSC2-201ENST00000450217 KCPQ6ZWJ8 1503 aa24.22■■□□□ 1.47
TSSC2-201ENST00000450217 GYS1P13807 737 aa24.22■■□□□ 1.47
TSSC2-201ENST00000450217 VSIG10Q8N0Z9 540 aa24.22■■□□□ 1.47
TSSC2-201ENST00000450217 CCDC87Q9NVE4 849 aa24.22■■□□□ 1.47
TSSC2-201ENST00000450217 TJP1Q07157 1748 aa24.21■■□□□ 1.47
TSSC2-201ENST00000450217 CICQ96RK0 1608 aaPredicted RBP24.21■■□□□ 1.47
TSSC2-201ENST00000450217 CYP19A1P11511 503 aaPredicted RBP24.21■■□□□ 1.47
TSSC2-201ENST00000450217 CEMIPQ8WUJ3 1361 aa24.19■■□□□ 1.46
TSSC2-201ENST00000450217 YBX3P16989 372 aaKnown RBP eCLIP24.19■■□□□ 1.46
TSSC2-201ENST00000450217 GRIN3BO60391 1043 aa24.18■■□□□ 1.46
TSSC2-201ENST00000450217 ZNF790Q6PG37 636 aa24.18■■□□□ 1.46
TSSC2-201ENST00000450217 SRP68Q9UHB9 627 aaKnown RBP24.18■■□□□ 1.46
TSSC2-201ENST00000450217 USP42Q9H9J4 1324 aaKnown RBP24.17■■□□□ 1.46
TSSC2-201ENST00000450217 DDX10Q13206 875 aaKnown RBP24.17■■□□□ 1.46
TSSC2-201ENST00000450217 RTF1Q92541 710 aaKnown RBP24.17■■□□□ 1.46
TSSC2-201ENST00000450217 SOS1Q07889 1333 aaPredicted RBP24.16■■□□□ 1.46
TSSC2-201ENST00000450217 ZNF496Q96IT1 587 aaPredicted RBP24.16■■□□□ 1.46
TSSC2-201ENST00000450217 PARP3Q9Y6F1 533 aa24.16■■□□□ 1.46
TSSC2-201ENST00000450217 MYH14Q7Z406 1995 aaKnown RBP24.15■■□□□ 1.46
TSSC2-201ENST00000450217 STARD3NLO95772 234 aa24.15■■□□□ 1.46
TSSC2-201ENST00000450217 RALBP1Q15311 655 aa24.15■■□□□ 1.46
TSSC2-201ENST00000450217 ZBTB1Q9Y2K1 713 aa24.15■■□□□ 1.46
TSSC2-201ENST00000450217 BTBD11A6QL63 1104 aa24.14■■□□□ 1.45
TSSC2-201ENST00000450217 NEFMP07197 916 aa24.14■■□□□ 1.45
TSSC2-201ENST00000450217 FKBP8Q14318 412 aa24.14■■□□□ 1.45
TSSC2-201ENST00000450217 HEG1Q9ULI3 1381 aa24.14■■□□□ 1.45
TSSC2-201ENST00000450217 ZPR1O75312 459 aa24.13■■□□□ 1.45
TSSC2-201ENST00000450217 MCM10Q7L590 875 aa24.13■■□□□ 1.45
TSSC2-201ENST00000450217 FMNL2Q96PY5 1086 aa24.13■■□□□ 1.45
TSSC2-201ENST00000450217 TEX13AQ9BXU3 409 aaPredicted RBP24.13■■□□□ 1.45
TSSC2-201ENST00000450217 HTATSF1O43719 755 aaKnown RBP24.12■■□□□ 1.45
TSSC2-201ENST00000450217 C4AP0C0L4 1744 aa24.11■■□□□ 1.45
TSSC2-201ENST00000450217 USPL1Q5W0Q7 1092 aa24.11■■□□□ 1.45
TSSC2-201ENST00000450217 ZNF784Q8NCA9 323 aaPredicted RBP24.11■■□□□ 1.45
TSSC2-201ENST00000450217 VIRMAQ69YN4 1812 aaKnown RBP24.11■■□□□ 1.45
TSSC2-201ENST00000450217 COL15A1P39059 1388 aa24.11■■□□□ 1.45
TSSC2-201ENST00000450217 C10orf71Q711Q0 1435 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms