RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 DZIP1Q86YF9 867 aaKnown RBP12.63□□□□□ -0.39
SCN5A-208ENST00000450102 TRMT1LQ7Z2T5 733 aaKnown RBP12.63□□□□□ -0.39
SCN5A-208ENST00000450102 PPP6R1Q9UPN7 881 aa12.63□□□□□ -0.39
SCN5A-208ENST00000450102 FGFR1OPO95684 399 aaKnown RBP12.63□□□□□ -0.39
SCN5A-208ENST00000450102 STARD3NLO95772 234 aa12.62□□□□□ -0.39
SCN5A-208ENST00000450102 TMEM266Q2M3C6 531 aa12.62□□□□□ -0.39
SCN5A-208ENST00000450102 ZNF444Q8N0Y2 327 aaPredicted RBP12.62□□□□□ -0.39
SCN5A-208ENST00000450102 FERMT1Q9BQL6 677 aa12.62□□□□□ -0.39
SCN5A-208ENST00000450102 RAB34Q9BZG1 259 aa12.62□□□□□ -0.39
SCN5A-208ENST00000450102 LMAN1P49257 510 aa12.62□□□□□ -0.39
SCN5A-208ENST00000450102 MAP9Q49MG5 647 aa12.62□□□□□ -0.39
SCN5A-208ENST00000450102 ZNF219Q9P2Y4 722 aaPredicted RBP12.62□□□□□ -0.39
SCN5A-208ENST00000450102 SERPINA10Q9UK55 444 aa12.62□□□□□ -0.39
SCN5A-208ENST00000450102 K7ELQ4 463 aaPredicted RBP12.62□□□□□ -0.39
SCN5A-208ENST00000450102 ADAMTS8Q9UP79 889 aa12.62□□□□□ -0.39
SCN5A-208ENST00000450102 SMARCA2P51531 1590 aa12.61□□□□□ -0.39
SCN5A-208ENST00000450102 TDRD12Q587J7 1177 aaKnown RBP12.61□□□□□ -0.39
SCN5A-208ENST00000450102 ZNF354CQ86Y25 554 aa12.61□□□□□ -0.39
SCN5A-208ENST00000450102 UQCRHLA0A096LP55 91 aa12.61□□□□□ -0.39
SCN5A-208ENST00000450102 UQCRHP07919 91 aa12.61□□□□□ -0.39
SCN5A-208ENST00000450102 CASQ1P31415 396 aa12.61□□□□□ -0.39
SCN5A-208ENST00000450102 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
SCN5A-208ENST00000450102 PUF60Q9UHX1 559 aaKnown RBP12.61□□□□□ -0.39
SCN5A-208ENST00000450102 BCAR3O75815 825 aa12.61□□□□□ -0.39
SCN5A-208ENST00000450102 SPECC1Q5M775 1068 aa12.61□□□□□ -0.39
SCN5A-208ENST00000450102 KIF5CO60282 957 aa12.61□□□□□ -0.39
SCN5A-208ENST00000450102 MAP3K9P80192 1104 aa12.61□□□□□ -0.39
SCN5A-208ENST00000450102 ARL1P40616 181 aaPredicted RBP12.61□□□□□ -0.39
SCN5A-208ENST00000450102 CETN1Q12798 172 aa12.61□□□□□ -0.39
SCN5A-208ENST00000450102 TSR2Q969E8 191 aaKnown RBP12.6□□□□□ -0.39
SCN5A-208ENST00000450102 RNF187Q5TA31 235 aaPredicted RBP12.6□□□□□ -0.39
SCN5A-208ENST00000450102 SPTY2D1Q68D10 685 aaPredicted RBP12.6□□□□□ -0.39
SCN5A-208ENST00000450102 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
SCN5A-208ENST00000450102 FSD2A1L4K1 749 aa12.6□□□□□ -0.39
SCN5A-208ENST00000450102 IFIT1P09914 478 aaKnown RBP12.6□□□□□ -0.39
SCN5A-208ENST00000450102 PAFAH1B1P43034 410 aa12.6□□□□□ -0.39
SCN5A-208ENST00000450102 CAMK4Q16566 473 aa12.6□□□□□ -0.39
SCN5A-208ENST00000450102 KIF4BQ2VIQ3 1234 aa12.6□□□□□ -0.39
SCN5A-208ENST00000450102 CTCFLQ8NI51 663 aaPredicted RBP12.6□□□□□ -0.39
SCN5A-208ENST00000450102 IL1RAPL2Q9NP60 686 aa12.6□□□□□ -0.39
SCN5A-208ENST00000450102 USO1O60763 962 aaKnown RBP12.59□□□□□ -0.39
SCN5A-208ENST00000450102 PRAM1Q96QH2 718 aa12.59□□□□□ -0.39
SCN5A-208ENST00000450102 RANBP6O60518 1105 aaKnown RBP12.59□□□□□ -0.39
SCN5A-208ENST00000450102 KIF20AO95235 890 aa12.59□□□□□ -0.39
SCN5A-208ENST00000450102 BAG4O95429 457 aaKnown RBP12.59□□□□□ -0.39
SCN5A-208ENST00000450102 RAB3IL1Q8TBN0 382 aa12.59□□□□□ -0.39
SCN5A-208ENST00000450102 CCDC175P0C221 793 aa12.59□□□□□ -0.39
SCN5A-208ENST00000450102 AKAP2Q9Y2D5 859 aa12.59□□□□□ -0.39
SCN5A-208ENST00000450102 TMCO5BA8MYB1 307 aa12.59□□□□□ -0.39
SCN5A-208ENST00000450102 MCM3P25205 808 aa12.59□□□□□ -0.39
SCN5A-208ENST00000450102 ZSCAN12O43309 604 aa12.58□□□□□ -0.4
SCN5A-208ENST00000450102 CASTP20810 708 aaKnown RBP12.58□□□□□ -0.4
SCN5A-208ENST00000450102 MAP3K11Q16584 847 aa12.58□□□□□ -0.4
SCN5A-208ENST00000450102 PPP1R14CQ8TAE6 165 aa12.58□□□□□ -0.4
SCN5A-208ENST00000450102 RPGRQ92834 1020 aaKnown RBP12.58□□□□□ -0.4
SCN5A-208ENST00000450102 NAPBQ9H115 298 aa12.58□□□□□ -0.4
SCN5A-208ENST00000450102 PRC1O43663 620 aa12.58□□□□□ -0.4
SCN5A-208ENST00000450102 RGS22Q8NE09 1264 aa12.58□□□□□ -0.4
SCN5A-208ENST00000450102 VTI1AQ96AJ9 217 aa12.58□□□□□ -0.4
SCN5A-208ENST00000450102 STAC3Q96MF2 364 aa12.58□□□□□ -0.4
SCN5A-208ENST00000450102 PRPF4BQ13523 1007 aaKnown RBP12.58□□□□□ -0.4
SCN5A-208ENST00000450102 PHAXQ9H814 394 aaKnown RBP12.58□□□□□ -0.4
SCN5A-208ENST00000450102 CCDC196A0A1B0GTZ2 297 aa12.58□□□□□ -0.4
SCN5A-208ENST00000450102 NUP88Q99567 741 aaPredicted RBP12.58□□□□□ -0.4
SCN5A-208ENST00000450102 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
SCN5A-208ENST00000450102 ACTN2P35609 894 aa12.58□□□□□ -0.4
SCN5A-208ENST00000450102 HLTFQ14527 1009 aaKnown RBP eCLIP12.58□□□□□ -0.4
SCN5A-208ENST00000450102 BMS1Q14692 1282 aaKnown RBP12.58□□□□□ -0.4
SCN5A-208ENST00000450102 TCERG1LQ5VWI1 586 aa12.58□□□□□ -0.4
SCN5A-208ENST00000450102 SAMM50Q9Y512 469 aa12.58□□□□□ -0.4
SCN5A-208ENST00000450102 SYCP3Q8IZU3 236 aa12.57□□□□□ -0.4
SCN5A-208ENST00000450102 LRRC45Q96CN5 670 aa12.57□□□□□ -0.4
SCN5A-208ENST00000450102 CCDC82Q8N4S0 544 aa12.57□□□□□ -0.4
SCN5A-208ENST00000450102 CFAP57Q96MR6 1250 aa12.57□□□□□ -0.4
SCN5A-208ENST00000450102 ZWINTO95229 277 aa12.57□□□□□ -0.4
SCN5A-208ENST00000450102 SFPQP23246 707 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCN5A-208ENST00000450102 NLRP5P59047 1200 aa12.57□□□□□ -0.4
SCN5A-208ENST00000450102 SLF2Q8IX21 1173 aa12.57□□□□□ -0.4
SCN5A-208ENST00000450102 THEMISQ8N1K5 641 aaPredicted RBP12.57□□□□□ -0.4
SCN5A-208ENST00000450102 ABCC8Q09428 1581 aa12.57□□□□□ -0.4
SCN5A-208ENST00000450102 IQCA1Q86XH1 822 aa12.57□□□□□ -0.4
SCN5A-208ENST00000450102 MAPK8IP2Q13387 824 aaPredicted RBP12.56□□□□□ -0.4
SCN5A-208ENST00000450102 IKBKGQ9Y6K9 419 aa12.56□□□□□ -0.4
SCN5A-208ENST00000450102 CCDC194A0A1B0GVG4 234 aa12.56□□□□□ -0.4
SCN5A-208ENST00000450102 GRM1Q13255 1194 aa12.56□□□□□ -0.4
SCN5A-208ENST00000450102 C6orf163Q5TEZ5 329 aa12.56□□□□□ -0.4
SCN5A-208ENST00000450102 MPHOSPH6Q99547 160 aaKnown RBP12.56□□□□□ -0.4
SCN5A-208ENST00000450102 ZNF692Q9BU19 519 aaPredicted RBP12.56□□□□□ -0.4
SCN5A-208ENST00000450102 URI1O94763 535 aaPredicted RBP12.56□□□□□ -0.4
SCN5A-208ENST00000450102 TOP1P11387 765 aaKnown RBP12.56□□□□□ -0.4
SCN5A-208ENST00000450102 MICALCLQ6ZW33 695 aa12.56□□□□□ -0.4
SCN5A-208ENST00000450102 XPCQ01831 940 aaPredicted RBP12.56□□□□□ -0.4
SCN5A-208ENST00000450102 NUTM1Q86Y26 1132 aa12.56□□□□□ -0.4
SCN5A-208ENST00000450102 GRPEL1Q9HAV7 217 aa12.56□□□□□ -0.4
SCN5A-208ENST00000450102 CPLX3Q8WVH0 158 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 BICD1Q96G01 975 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 CDK19Q9BWU1 502 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 MTIF2P46199 727 aaKnown RBP12.55□□□□□ -0.4
SCN5A-208ENST00000450102 PTPN14Q15678 1187 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 LRSAM1Q6UWE0 723 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms