RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 ITPK1Q13572 414 aa17.69■□□□□ 0.42
SEC22C-209ENST00000449617 LINC00116Q8NCU8 138 aa17.69■□□□□ 0.42
SEC22C-209ENST00000449617 SCN11AQ9UI33 1791 aa17.69■□□□□ 0.42
SEC22C-209ENST00000449617 UTRNP46939 3433 aa17.68■□□□□ 0.42
SEC22C-209ENST00000449617 MAP3K5Q99683 1374 aa17.68■□□□□ 0.42
SEC22C-209ENST00000449617 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
SEC22C-209ENST00000449617 AMIGO3Q86WK7 504 aa17.68■□□□□ 0.42
SEC22C-209ENST00000449617 ATP6V1AP38606 617 aa17.67■□□□□ 0.42
SEC22C-209ENST00000449617 CABP4P57796 275 aa17.67■□□□□ 0.42
SEC22C-209ENST00000449617 MSL1Q68DK7 614 aa17.67■□□□□ 0.42
SEC22C-209ENST00000449617 FLAD1Q8NFF5 587 aa17.67■□□□□ 0.42
SEC22C-209ENST00000449617 ZNF831Q5JPB2 1677 aa17.67■□□□□ 0.42
SEC22C-209ENST00000449617 PHF14O94880 888 aa17.66■□□□□ 0.42
SEC22C-209ENST00000449617 SMIM5Q71RC9 77 aa17.66■□□□□ 0.42
SEC22C-209ENST00000449617 VIRMAQ69YN4 1812 aaKnown RBP17.66■□□□□ 0.42
SEC22C-209ENST00000449617 KLHL34Q8N239 644 aa17.65■□□□□ 0.42
SEC22C-209ENST00000449617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.64■□□□□ 0.42
SEC22C-209ENST00000449617 COL5A3P25940 1745 aaPredicted RBP17.64■□□□□ 0.42
SEC22C-209ENST00000449617 AKAP4Q5JQC9 854 aa17.64■□□□□ 0.42
SEC22C-209ENST00000449617 SLC4A9Q96Q91 983 aa17.64■□□□□ 0.42
SEC22C-209ENST00000449617 RBM42Q9BTD8 480 aaKnown RBP17.64■□□□□ 0.42
SEC22C-209ENST00000449617 GOLGB1Q14789 3259 aaKnown RBP17.64■□□□□ 0.41
SEC22C-209ENST00000449617 U2SURPO15042 1029 aaKnown RBP17.64■□□□□ 0.41
SEC22C-209ENST00000449617 GNPATO15228 680 aa17.64■□□□□ 0.41
SEC22C-209ENST00000449617 NFATC2IPQ8NCF5 419 aa17.64■□□□□ 0.41
SEC22C-209ENST00000449617 SSFA2P28290 1259 aa17.63■□□□□ 0.41
SEC22C-209ENST00000449617 MRC1P22897 1456 aa17.62■□□□□ 0.41
SEC22C-209ENST00000449617 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
SEC22C-209ENST00000449617 ADAMTS7Q9UKP4 1686 aa17.61■□□□□ 0.41
SEC22C-209ENST00000449617 PTCD1O75127 700 aaKnown RBP17.61■□□□□ 0.41
SEC22C-209ENST00000449617 LGR6Q9HBX8 967 aa17.61■□□□□ 0.41
SEC22C-209ENST00000449617 MYH14Q7Z406 1995 aaKnown RBP17.6■□□□□ 0.41
SEC22C-209ENST00000449617 RNMTO43148 476 aaKnown RBP17.6■□□□□ 0.41
SEC22C-209ENST00000449617 CFAP53Q96M91 514 aa17.6■□□□□ 0.41
SEC22C-209ENST00000449617 SLC52A2Q9HAB3 445 aa17.6■□□□□ 0.41
SEC22C-209ENST00000449617 TJP1Q07157 1748 aa17.59■□□□□ 0.41
SEC22C-209ENST00000449617 YY1P25490 414 aa17.59■□□□□ 0.41
SEC22C-209ENST00000449617 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
SEC22C-209ENST00000449617 NLGN2Q8NFZ4 835 aa17.59■□□□□ 0.41
SEC22C-209ENST00000449617 CNTNAP4Q9C0A0 1308 aa17.58■□□□□ 0.4
SEC22C-209ENST00000449617 CICQ96RK0 1608 aaPredicted RBP17.58■□□□□ 0.4
SEC22C-209ENST00000449617 RC3H1Q5TC82 1133 aaKnown RBP17.57■□□□□ 0.4
SEC22C-209ENST00000449617 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
SEC22C-209ENST00000449617 C4AP0C0L4 1744 aa17.55■□□□□ 0.4
SEC22C-209ENST00000449617 CHD4Q14839 1912 aa17.55■□□□□ 0.4
SEC22C-209ENST00000449617 SLC39A6Q13433 755 aa17.55■□□□□ 0.4
SEC22C-209ENST00000449617 GPR162Q16538 588 aa17.55■□□□□ 0.4
SEC22C-209ENST00000449617 GAS2L2Q8NHY3 880 aa17.55■□□□□ 0.4
SEC22C-209ENST00000449617 NUDCQ9Y266 331 aa17.55■□□□□ 0.4
SEC22C-209ENST00000449617 KCPQ6ZWJ8 1503 aa17.54■□□□□ 0.4
SEC22C-209ENST00000449617 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
SEC22C-209ENST00000449617 CRKLP46109 303 aaKnown RBP17.54■□□□□ 0.4
SEC22C-209ENST00000449617 TRAPPC3LQ5T215 181 aa17.54■□□□□ 0.4
SEC22C-209ENST00000449617 PELP1Q8IZL8 1130 aaKnown RBP17.54■□□□□ 0.4
SEC22C-209ENST00000449617 RSPH6AQ9H0K4 717 aa17.54■□□□□ 0.4
SEC22C-209ENST00000449617 RPS6KA4O75676 772 aa17.53■□□□□ 0.4
SEC22C-209ENST00000449617 ADRA2BP18089 450 aa17.53■□□□□ 0.4
SEC22C-209ENST00000449617 ARHGEF1Q92888 912 aaKnown RBP17.53■□□□□ 0.4
SEC22C-209ENST00000449617 PHACTR3Q96KR7 559 aa17.53■□□□□ 0.4
SEC22C-209ENST00000449617 CD2APQ9Y5K6 639 aa17.53■□□□□ 0.4
SEC22C-209ENST00000449617 UBR2Q8IWV8 1755 aa17.53■□□□□ 0.4
SEC22C-209ENST00000449617 SIPA1L3O60292 1781 aaPredicted RBP17.52■□□□□ 0.4
SEC22C-209ENST00000449617 GNAT3A8MTJ3 354 aa17.52■□□□□ 0.4
SEC22C-209ENST00000449617 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
SEC22C-209ENST00000449617 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.4
SEC22C-209ENST00000449617 DNAJC10Q8IXB1 793 aa17.51■□□□□ 0.39
SEC22C-209ENST00000449617 IL17REQ8NFR9 667 aa17.51■□□□□ 0.39
SEC22C-209ENST00000449617 MMP10P09238 476 aa17.5■□□□□ 0.39
SEC22C-209ENST00000449617 RFC4P35249 363 aa17.5■□□□□ 0.39
SEC22C-209ENST00000449617 TEFQ10587 303 aa17.49■□□□□ 0.39
SEC22C-209ENST00000449617 INTS5Q6P9B9 1019 aaKnown RBP17.49■□□□□ 0.39
SEC22C-209ENST00000449617 GYS1P13807 737 aa17.48■□□□□ 0.39
SEC22C-209ENST00000449617 YBX3P16989 372 aaKnown RBP eCLIP17.48■□□□□ 0.392e-7■■□□□ 12.2
SEC22C-209ENST00000449617 CCDC87Q9NVE4 849 aa17.48■□□□□ 0.39
SEC22C-209ENST00000449617 FCHSD2O94868 740 aa17.47■□□□□ 0.39
SEC22C-209ENST00000449617 NLGN1Q8N2Q7 840 aa17.47■□□□□ 0.39
SEC22C-209ENST00000449617 CEMIPQ8WUJ3 1361 aa17.47■□□□□ 0.39
SEC22C-209ENST00000449617 CYP19A1P11511 503 aaPredicted RBP17.47■□□□□ 0.39
SEC22C-209ENST00000449617 TTC5Q8N0Z6 440 aa17.47■□□□□ 0.39
SEC22C-209ENST00000449617 SRP68Q9UHB9 627 aaKnown RBP17.47■□□□□ 0.39
SEC22C-209ENST00000449617 KIF13BQ9NQT8 1826 aa17.47■□□□□ 0.39
SEC22C-209ENST00000449617 VSIG10Q8N0Z9 540 aa17.46■□□□□ 0.39
SEC22C-209ENST00000449617 SOS1Q07889 1333 aaPredicted RBP17.45■□□□□ 0.38
SEC22C-209ENST00000449617 USP42Q9H9J4 1324 aaKnown RBP17.45■□□□□ 0.38
SEC22C-209ENST00000449617 ZNF790Q6PG37 636 aa17.45■□□□□ 0.38
SEC22C-209ENST00000449617 ZNF496Q96IT1 587 aaPredicted RBP17.45■□□□□ 0.38
SEC22C-209ENST00000449617 ZBTB1Q9Y2K1 713 aa17.44■□□□□ 0.38
SEC22C-209ENST00000449617 C10orf71Q711Q0 1435 aa17.44■□□□□ 0.38
SEC22C-209ENST00000449617 KIAA1551Q9HCM1 1747 aa17.43■□□□□ 0.38
SEC22C-209ENST00000449617 GRIN3BO60391 1043 aa17.43■□□□□ 0.38
SEC22C-209ENST00000449617 DDX10Q13206 875 aaKnown RBP17.43■□□□□ 0.38
SEC22C-209ENST00000449617 WWC3Q9ULE0 1092 aa17.43■□□□□ 0.38
SEC22C-209ENST00000449617 COL15A1P39059 1388 aa17.42■□□□□ 0.38
SEC22C-209ENST00000449617 HEG1Q9ULI3 1381 aa17.42■□□□□ 0.38
SEC22C-209ENST00000449617 FKBP8Q14318 412 aa17.42■□□□□ 0.38
SEC22C-209ENST00000449617 MCM10Q7L590 875 aa17.42■□□□□ 0.38
SEC22C-209ENST00000449617 ZNF784Q8NCA9 323 aaPredicted RBP17.42■□□□□ 0.38
SEC22C-209ENST00000449617 RTF1Q92541 710 aaKnown RBP17.42■□□□□ 0.38
SEC22C-209ENST00000449617 PXDNLA1KZ92 1463 aa17.42■□□□□ 0.38
SEC22C-209ENST00000449617 N4BP2Q86UW6 1770 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms