RNA–Protein interactions for RNA: ENST00000449191.1

UBE2F-SCLY-201, Transcript of UBE2F-SCLY readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 3 BASIC

Gene UBE2F-SCLY, Length 951 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-SCLY-201ENST00000449191 ATG3Q9NT62 314 aa13.59□□□□□ -0.23
UBE2F-SCLY-201ENST00000449191 COL5A3P25940 1745 aaPredicted RBP13.59□□□□□ -0.23
UBE2F-SCLY-201ENST00000449191 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.58□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 PHF14O94880 888 aa13.58□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 SSFA2P28290 1259 aa13.58□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 IL13P35225 146 aa13.58□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 ATP6V1AP38606 617 aa13.58□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 ITPK1Q13572 414 aa13.58□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 GPR162Q16538 588 aa13.58□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 SULT6B1Q6IMI4 303 aa13.58□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 NLGN2Q8NFZ4 835 aa13.58□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 GNPATO15228 680 aa13.56□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 PER1O15534 1290 aaPredicted RBP13.56□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 VIRMAQ69YN4 1812 aaKnown RBP13.55□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 CICQ96RK0 1608 aaPredicted RBP13.55□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 MTHFSP49914 203 aa13.55□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 CABP4P57796 275 aa13.55□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 SMIM5Q71RC9 77 aa13.55□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 PELP1Q8IZL8 1130 aaKnown RBP13.55□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 NPC1L1Q9UHC9 1359 aa13.55□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 CC2D1BQ5T0F9 858 aaKnown RBP13.54□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 ZNF784Q8NCA9 323 aaPredicted RBP13.54□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 CD2APQ9Y5K6 639 aa13.54□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 TJP1Q07157 1748 aa13.53□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 SLC4A9Q96Q91 983 aa13.53□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 CNTNAP4Q9C0A0 1308 aa13.53□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 MRC1P22897 1456 aa13.53□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 C4AP0C0L4 1744 aa13.53□□□□□ -0.24
UBE2F-SCLY-201ENST00000449191 COL3A1P02461 1466 aaPredicted RBP13.52□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 MYH14Q7Z406 1995 aaKnown RBP13.52□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 ADAMTS7Q9UKP4 1686 aa13.51□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 YBX3P16989 372 aaKnown RBP eCLIP13.51□□□□□ -0.251e-6■■□□□ 11.6
UBE2F-SCLY-201ENST00000449191 AKAP4Q5JQC9 854 aa13.51□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 RC3H1Q5TC82 1133 aaKnown RBP13.51□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 RTCBQ9Y3I0 505 aaKnown RBP13.51□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 GRIN3BO60391 1043 aa13.5□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 DIAPH1O60610 1272 aaKnown RBP13.5□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 HMOX1P09601 288 aa13.5□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 ADRA2BP18089 450 aa13.5□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 NFATC2IPQ8NCF5 419 aa13.5□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 KIF13BQ9NQT8 1826 aa13.5□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 TRAPPC3LQ5T215 181 aa13.49□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 PTCD1O75127 700 aaKnown RBP13.48□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 RPS6KA4O75676 772 aa13.48□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 SLC52A2Q9HAB3 445 aa13.48□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 RNMTO43148 476 aaKnown RBP13.47□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 MMP10P09238 476 aa13.47□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 ARHGEF1Q92888 912 aaKnown RBP13.47□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 KIAA1551Q9HCM1 1747 aa13.47□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 UBR2Q8IWV8 1755 aa13.46□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 KCPQ6ZWJ8 1503 aa13.46□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 RFC4P35249 363 aa13.46□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 CRKLP46109 303 aaKnown RBP13.46□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 CNGB1Q14028 1251 aaPredicted RBP13.46□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 MTHFSDQ2M296 383 aaKnown RBP13.46□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 LGR6Q9HBX8 967 aa13.46□□□□□ -0.25
UBE2F-SCLY-201ENST00000449191 C10orf71Q711Q0 1435 aa13.46□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 PXDNLA1KZ92 1463 aa13.45□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 GYS1P13807 737 aa13.45□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 NLGN1Q8N2Q7 840 aa13.45□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 U2SURPO15042 1029 aaKnown RBP13.44□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 N4BP2Q86UW6 1770 aaPredicted RBP13.44□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 SIPA1L3O60292 1781 aaPredicted RBP13.43□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 BRCA1P38398 1863 aaKnown RBP13.42□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 SLC39A6Q13433 755 aa13.42□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 INTS5Q6P9B9 1019 aaKnown RBP13.42□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 DNAJC10Q8IXB1 793 aa13.42□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 GAS2L2Q8NHY3 880 aa13.42□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 CFAP53Q96M91 514 aa13.42□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 CCDC87Q9NVE4 849 aa13.42□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 WWC3Q9ULE0 1092 aa13.42□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 SRP68Q9UHB9 627 aaKnown RBP13.41□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 PARP3Q9Y6F1 533 aa13.41□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 ADCY9O60503 1353 aa13.41□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 SOS1Q07889 1333 aaPredicted RBP13.4□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 ATP10DQ9P241 1426 aa13.4□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 CYP19A1P11511 503 aaPredicted RBP13.4□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 TGFB2P61812 414 aa13.4□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 VSIG10Q8N0Z9 540 aa13.4□□□□□ -0.26
UBE2F-SCLY-201ENST00000449191 GNAT3A8MTJ3 354 aa13.39□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 GIGYF1O75420 1035 aaPredicted RBP13.39□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 FKBP8Q14318 412 aa13.39□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 COL15A1P39059 1388 aa13.39□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 PPP2R1AP30153 589 aa13.38□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 PRKAR2BP31323 418 aa13.38□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 C1QTNF8P60827 252 aa13.38□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 TTC5Q8N0Z6 440 aa13.38□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 RSPH6AQ9H0K4 717 aa13.38□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 NUDCQ9Y266 331 aa13.38□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 ZBTB1Q9Y2K1 713 aa13.38□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 ARFGEF1Q9Y6D6 1849 aa13.37□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 CEMIPQ8WUJ3 1361 aa13.37□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 ZPR1O75312 459 aa13.37□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 DDR1Q08345 913 aa13.37□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 TEFQ10587 303 aa13.37□□□□□ -0.27
UBE2F-SCLY-201ENST00000449191 IL17REQ8NFR9 667 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms