RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	GNAI3	P08754	354 aa		20.89	■□□□□ 0.93
TOM1-210	ENST00000449058	NFAT5	O94916	1531 aa		20.88	■□□□□ 0.93
TOM1-210	ENST00000449058	PDE1A	P54750	535 aa		20.88	■□□□□ 0.93
TOM1-210	ENST00000449058	FKBP5	Q13451	457 aa	Predicted RBP	20.88	■□□□□ 0.93
TOM1-210	ENST00000449058	GZF1	Q9H116	711 aa	Predicted RBP	20.88	■□□□□ 0.93
TOM1-210	ENST00000449058	SALL3	Q9BXA9	1300 aa		20.88	■□□□□ 0.93
TOM1-210	ENST00000449058	PHF8	Q9UPP1	1060 aa		20.87	■□□□□ 0.93
TOM1-210	ENST00000449058	FOXD4L1	Q9NU39	408 aa		20.87	■□□□□ 0.93
TOM1-210	ENST00000449058	MED1	Q15648	1581 aa	Predicted RBP	20.86	■□□□□ 0.93
TOM1-210	ENST00000449058	LTV1	Q96GA3	475 aa	Predicted RBP	20.86	■□□□□ 0.93
TOM1-210	ENST00000449058	REC8	O95072	547 aa		20.86	■□□□□ 0.93
TOM1-210	ENST00000449058	XRCC6	P12956	609 aa	Known RBP eCLIP	20.86	■□□□□ 0.93
TOM1-210	ENST00000449058	ATP8B2	P98198	1209 aa		20.86	■□□□□ 0.93
TOM1-210	ENST00000449058	CLEC17A	Q6ZS10	378 aa		20.86	■□□□□ 0.93
TOM1-210	ENST00000449058	PHRF1	Q9P1Y6	1649 aa	Known RBP	20.85	■□□□□ 0.93
TOM1-210	ENST00000449058	CEMIP	Q8WUJ3	1361 aa		20.85	■□□□□ 0.93
TOM1-210	ENST00000449058	PTMS	P20962	102 aa		20.85	■□□□□ 0.93
TOM1-210	ENST00000449058	IP6K1	Q92551	441 aa		20.85	■□□□□ 0.93
TOM1-210	ENST00000449058	EXOC6B	Q9Y2D4	811 aa		20.85	■□□□□ 0.93
TOM1-210	ENST00000449058	IBTK	Q9P2D0	1353 aa	Predicted RBP	20.84	■□□□□ 0.93
TOM1-210	ENST00000449058	KDM3B	Q7LBC6	1761 aa		20.84	■□□□□ 0.93
TOM1-210	ENST00000449058	PNMA6E	A0A0J9YXQ4	647 aa		20.83	■□□□□ 0.93
TOM1-210	ENST00000449058	ERC2	O15083	957 aa		20.83	■□□□□ 0.93
TOM1-210	ENST00000449058	FAM43A	Q8N2R8	423 aa		20.83	■□□□□ 0.93
TOM1-210	ENST00000449058	NECTIN2	Q92692	538 aa		20.83	■□□□□ 0.93
TOM1-210	ENST00000449058	LRRCC1	Q9C099	1032 aa		20.83	■□□□□ 0.93
TOM1-210	ENST00000449058	ZNF142	P52746	1687 aa	Predicted RBP	20.83	■□□□□ 0.92
TOM1-210	ENST00000449058	SKOR2	Q2VWA4	1001 aa	Predicted RBP	20.82	■□□□□ 0.92
TOM1-210	ENST00000449058	USHBP1	Q8N6Y0	703 aa		20.82	■□□□□ 0.92
TOM1-210	ENST00000449058	SSFA2	P28290	1259 aa		20.81	■□□□□ 0.92
TOM1-210	ENST00000449058	ISY1	Q9ULR0	285 aa	Known RBP	20.81	■□□□□ 0.92
TOM1-210	ENST00000449058	LMO7	Q8WWI1	1683 aa		20.81	■□□□□ 0.92
TOM1-210	ENST00000449058	C14orf37	Q86TY3	774 aa		20.81	■□□□□ 0.92
TOM1-210	ENST00000449058	USP44	Q9H0E7	712 aa		20.81	■□□□□ 0.92
TOM1-210	ENST00000449058	RGPD2	P0DJD1	1756 aa		20.8	■□□□□ 0.92
TOM1-210	ENST00000449058	AK9	Q5TCS8	1911 aa		20.8	■□□□□ 0.92
TOM1-210	ENST00000449058	HDGFL1	Q5TGJ6	251 aa		20.8	■□□□□ 0.92
TOM1-210	ENST00000449058	LRRFIP2	Q9Y608	721 aa	Known RBP	20.8	■□□□□ 0.92
TOM1-210	ENST00000449058	ADGRL3	Q9HAR2	1447 aa		20.79	■□□□□ 0.92
TOM1-210	ENST00000449058	MX1	P20591	662 aa		20.79	■□□□□ 0.92
TOM1-210	ENST00000449058	MRE11	P49959	708 aa		20.79	■□□□□ 0.92
TOM1-210	ENST00000449058	NBPF6	Q5VWK0	638 aa		20.79	■□□□□ 0.92
TOM1-210	ENST00000449058	NBPF4	Q96M43	638 aa		20.79	■□□□□ 0.92
TOM1-210	ENST00000449058	STAP2	Q9UGK3	403 aa		20.79	■□□□□ 0.92
TOM1-210	ENST00000449058	ANKLE2	Q86XL3	938 aa		20.79	■□□□□ 0.92
TOM1-210	ENST00000449058	ST18	O60284	1047 aa		20.78	■□□□□ 0.92
TOM1-210	ENST00000449058	SETD1B	Q9UPS6	1966 aa	Known RBP	20.78	■□□□□ 0.92
TOM1-210	ENST00000449058	CYP2E1	P05181	493 aa	Predicted RBP	20.77	■□□□□ 0.92
TOM1-210	ENST00000449058	HOXB7	P09629	217 aa		20.77	■□□□□ 0.92
TOM1-210	ENST00000449058	PHAX	Q9H814	394 aa	Known RBP	20.77	■□□□□ 0.92
TOM1-210	ENST00000449058	UBTFL1	P0CB47	393 aa	Predicted RBP	20.77	■□□□□ 0.91
TOM1-210	ENST00000449058	EIF4A1	P60842	406 aa	Known RBP	20.77	■□□□□ 0.91
TOM1-210	ENST00000449058	KCNH5	Q8NCM2	988 aa		20.77	■□□□□ 0.91
TOM1-210	ENST00000449058	SSH3	Q8TE77	659 aa		20.77	■□□□□ 0.91
TOM1-210	ENST00000449058	SRCIN1	Q9C0H9	1055 aa		20.77	■□□□□ 0.91
TOM1-210	ENST00000449058	NUCB2	P80303	420 aa		20.76	■□□□□ 0.91
TOM1-210	ENST00000449058	TSHZ3	Q63HK5	1081 aa		20.76	■□□□□ 0.91
TOM1-210	ENST00000449058	ARX	Q96QS3	562 aa		20.76	■□□□□ 0.91
TOM1-210	ENST00000449058	ESYT1	Q9BSJ8	1104 aa		20.76	■□□□□ 0.91
TOM1-210	ENST00000449058	BAG4	O95429	457 aa	Known RBP	20.75	■□□□□ 0.91
TOM1-210	ENST00000449058	PANK2	Q9BZ23	570 aa		20.75	■□□□□ 0.91
TOM1-210	ENST00000449058	CWC22	Q9HCG8	908 aa	Known RBP	20.75	■□□□□ 0.91
TOM1-210	ENST00000449058	AOX1	Q06278	1338 aa		20.75	■□□□□ 0.91
TOM1-210	ENST00000449058	LGR6	Q9HBX8	967 aa		20.75	■□□□□ 0.91
TOM1-210	ENST00000449058	GRPEL1	Q9HAV7	217 aa		20.74	■□□□□ 0.91
TOM1-210	ENST00000449058	GOLGA6L22	H0YM25	854 aa		20.74	■□□□□ 0.91
TOM1-210	ENST00000449058	PSME1	Q06323	249 aa		20.74	■□□□□ 0.91
TOM1-210	ENST00000449058	NCAPD2	Q15021	1401 aa		20.74	■□□□□ 0.91
TOM1-210	ENST00000449058	POLA2	Q14181	598 aa		20.73	■□□□□ 0.91
TOM1-210	ENST00000449058	CHML	P26374	656 aa		20.73	■□□□□ 0.91
TOM1-210	ENST00000449058	ESCO1	Q5FWF5	840 aa		20.73	■□□□□ 0.91
TOM1-210	ENST00000449058	RBM33	Q96EV2	1170 aa	Known RBP	20.73	■□□□□ 0.91
TOM1-210	ENST00000449058	SLIT3	O75094	1523 aa		20.72	■□□□□ 0.91
TOM1-210	ENST00000449058	CHMP4A	Q9BY43	222 aa		20.72	■□□□□ 0.91
TOM1-210	ENST00000449058	AKAP4	Q5JQC9	854 aa		20.72	■□□□□ 0.91
TOM1-210	ENST00000449058	RAB11FIP3	O75154	756 aa		20.71	■□□□□ 0.91
TOM1-210	ENST00000449058	IL17RA	Q96F46	866 aa		20.71	■□□□□ 0.91
TOM1-210	ENST00000449058	CAMTA1	Q9Y6Y1	1673 aa		20.7	■□□□□ 0.9
TOM1-210	ENST00000449058	EIF2S2	P20042	333 aa	Known RBP	20.7	■□□□□ 0.9
TOM1-210	ENST00000449058	CHPF2	Q9P2E5	772 aa		20.7	■□□□□ 0.9
TOM1-210	ENST00000449058	KLHL40	Q2TBA0	621 aa		20.7	■□□□□ 0.9
TOM1-210	ENST00000449058	BEND3	Q5T5X7	828 aa		20.7	■□□□□ 0.9
TOM1-210	ENST00000449058	PPP1R42	Q7Z4L9	355 aa		20.7	■□□□□ 0.9
TOM1-210	ENST00000449058	GAS2L3	Q86XJ1	694 aa		20.7	■□□□□ 0.9
TOM1-210	ENST00000449058	ZGPAT	Q8N5A5	531 aa	Known RBP	20.7	■□□□□ 0.9
TOM1-210	ENST00000449058	OVOS2	A0A0G2JMS6	1433 aa		20.69	■□□□□ 0.9
TOM1-210	ENST00000449058	KCNQ3	O43525	872 aa		20.69	■□□□□ 0.9
TOM1-210	ENST00000449058	ANAPC15	P60006	121 aa		20.69	■□□□□ 0.9
TOM1-210	ENST00000449058	PLEKHO1	Q53GL0	409 aa	Predicted RBP	20.69	■□□□□ 0.9
TOM1-210	ENST00000449058	ZNF530	Q6P9A1	599 aa	Predicted RBP	20.69	■□□□□ 0.9
TOM1-210	ENST00000449058	LRRC59	Q96AG4	307 aa	Known RBP	20.69	■□□□□ 0.9
TOM1-210	ENST00000449058	TRIM6-TRIM34	B2RNG4	842 aa		20.68	■□□□□ 0.9
TOM1-210	ENST00000449058	PKP1	Q13835	747 aa		20.68	■□□□□ 0.9
TOM1-210	ENST00000449058	DNAAF4	Q8WXU2	420 aa		20.68	■□□□□ 0.9
TOM1-210	ENST00000449058	RILPL2	Q969X0	211 aa		20.68	■□□□□ 0.9
TOM1-210	ENST00000449058	UNC5CL	Q8IV45	518 aa		20.68	■□□□□ 0.9
TOM1-210	ENST00000449058	TEF	Q10587	303 aa		20.67	■□□□□ 0.9
TOM1-210	ENST00000449058	AMOT	Q4VCS5	1084 aa		20.67	■□□□□ 0.9
TOM1-210	ENST00000449058	ARHGEF25	Q86VW2	580 aa		20.67	■□□□□ 0.9
TOM1-210	ENST00000449058	IL1RAPL2	Q9NP60	686 aa		20.67	■□□□□ 0.9

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