RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 TSR2Q969E8 191 aaKnown RBP18.94■□□□□ 0.62
APP-210ENST00000448850 RGS17Q9UGC6 210 aaPredicted RBP18.94■□□□□ 0.62
APP-210ENST00000448850 MARCH10Q8NA82 808 aaPredicted RBP18.93■□□□□ 0.62
APP-210ENST00000448850 MBIPQ9NS73 344 aa18.93■□□□□ 0.62
APP-210ENST00000448850 ERVV-2B6SEH9 535 aa18.93■□□□□ 0.62
APP-210ENST00000448850 SEPT12Q8IYM1 358 aa18.93■□□□□ 0.62
APP-210ENST00000448850 SLC52A2Q9HAB3 445 aa18.93■□□□□ 0.62
APP-210ENST00000448850 BABAM1Q9NWV8 329 aa18.93■□□□□ 0.62
APP-210ENST00000448850 SBF2Q86WG5 1849 aa18.91■□□□□ 0.62
APP-210ENST00000448850 MIS18AQ9NYP9 233 aa18.91■□□□□ 0.62
APP-210ENST00000448850 TSPYL4Q9UJ04 414 aa18.91■□□□□ 0.62
APP-210ENST00000448850 CABP4P57796 275 aa18.9■□□□□ 0.62
APP-210ENST00000448850 NFATC2IPQ8NCF5 419 aa18.9■□□□□ 0.62
APP-210ENST00000448850 BTBD11A6QL63 1104 aa18.89■□□□□ 0.61
APP-210ENST00000448850 RXRBP28702 533 aa18.89■□□□□ 0.61
APP-210ENST00000448850 PAPPAQ13219 1627 aa18.89■□□□□ 0.61
APP-210ENST00000448850 EXOSC9Q06265 439 aaKnown RBP18.88■□□□□ 0.61
APP-210ENST00000448850 POTEAQ6S8J7 498 aa18.88■□□□□ 0.61
APP-210ENST00000448850 UBR2Q8IWV8 1755 aa18.87■□□□□ 0.61
APP-210ENST00000448850 TMOD3Q9NYL9 352 aa18.86■□□□□ 0.61
APP-210ENST00000448850 CACNA1FO60840 1977 aa18.85■□□□□ 0.61
APP-210ENST00000448850 NHSQ6T4R5 1651 aa18.85■□□□□ 0.61
APP-210ENST00000448850 BCL9O00512 1426 aa18.84■□□□□ 0.61
APP-210ENST00000448850 CT47B1P0C2W7 299 aaPredicted RBP18.84■□□□□ 0.61
APP-210ENST00000448850 PRIM1P49642 420 aaKnown RBP18.84■□□□□ 0.61
APP-210ENST00000448850 KCNQ3O43525 872 aa18.83■□□□□ 0.6
APP-210ENST00000448850 ZNF790Q6PG37 636 aa18.83■□□□□ 0.6
APP-210ENST00000448850 KRT27Q7Z3Y8 459 aa18.83■□□□□ 0.6
APP-210ENST00000448850 C8orf58Q8NAV2 365 aa18.83■□□□□ 0.6
APP-210ENST00000448850 RGS12O14924 1447 aa18.82■□□□□ 0.6
APP-210ENST00000448850 EIF4A1P60842 406 aaKnown RBP18.82■□□□□ 0.6
APP-210ENST00000448850 SLC39A6Q13433 755 aa18.82■□□□□ 0.6
APP-210ENST00000448850 FAM182BQ5T319 152 aa18.82■□□□□ 0.6
APP-210ENST00000448850 PIGBQ92521 554 aa18.82■□□□□ 0.6
APP-210ENST00000448850 SYTL4Q96C24 671 aaPredicted RBP18.82■□□□□ 0.6
APP-210ENST00000448850 ACSBG1Q96GR2 724 aa18.82■□□□□ 0.6
APP-210ENST00000448850 BTAF1O14981 1849 aa18.82■□□□□ 0.6
APP-210ENST00000448850 KRT24Q2M2I5 525 aa18.81■□□□□ 0.6
APP-210ENST00000448850 TSPYL6Q8N831 410 aa18.81■□□□□ 0.6
APP-210ENST00000448850 RCAN3Q9UKA8 241 aa18.81■□□□□ 0.6
APP-210ENST00000448850 C5P01031 1676 aa18.81■□□□□ 0.6
APP-210ENST00000448850 ELL2O00472 640 aaPredicted RBP18.81■□□□□ 0.6
APP-210ENST00000448850 TWISTNBQ3B726 338 aaPredicted RBP18.81■□□□□ 0.6
APP-210ENST00000448850 TTC5Q8N0Z6 440 aa18.81■□□□□ 0.6
APP-210ENST00000448850 VAMP4O75379 141 aa18.8■□□□□ 0.6
APP-210ENST00000448850 LAMB4A4D0S4 1761 aa18.79■□□□□ 0.6
APP-210ENST00000448850 HEG1Q9ULI3 1381 aa18.79■□□□□ 0.6
APP-210ENST00000448850 KCPQ6ZWJ8 1503 aa18.78■□□□□ 0.6
APP-210ENST00000448850 KCNQ2O43526 872 aa18.78■□□□□ 0.6
APP-210ENST00000448850 SOS1Q07889 1333 aaPredicted RBP18.78■□□□□ 0.6
APP-210ENST00000448850 FAM196AQ6ZSG2 479 aa18.77■□□□□ 0.6
APP-210ENST00000448850 ZNF428Q96B54 188 aa18.77■□□□□ 0.6
APP-210ENST00000448850 ZNF496Q96IT1 587 aaPredicted RBP18.77■□□□□ 0.6
APP-210ENST00000448850 ASAP1Q9ULH1 1129 aa18.77■□□□□ 0.6
APP-210ENST00000448850 FMNL2Q96PY5 1086 aa18.77■□□□□ 0.59
APP-210ENST00000448850 ATG3Q9NT62 314 aa18.77■□□□□ 0.59
APP-210ENST00000448850 RARSP54136 660 aaKnown RBP18.76■□□□□ 0.59
APP-210ENST00000448850 GIGYF1O75420 1035 aaPredicted RBP18.75■□□□□ 0.59
APP-210ENST00000448850 HOXB7P09629 217 aa18.75■□□□□ 0.59
APP-210ENST00000448850 SUPT16HQ9Y5B9 1047 aaKnown RBP18.74■□□□□ 0.59
APP-210ENST00000448850 ALDH1L2Q3SY69 923 aa18.74■□□□□ 0.59
APP-210ENST00000448850 PTCD1O75127 700 aaKnown RBP18.73■□□□□ 0.59
APP-210ENST00000448850 LY75O60449 1722 aa18.73■□□□□ 0.59
APP-210ENST00000448850 ZNF831Q5JPB2 1677 aa18.72■□□□□ 0.59
APP-210ENST00000448850 TJP1Q07157 1748 aa18.72■□□□□ 0.59
APP-210ENST00000448850 SNRPA1P09661 255 aaKnown RBP18.72■□□□□ 0.59
APP-210ENST00000448850 PTF1AQ7RTS3 328 aa18.72■□□□□ 0.59
APP-210ENST00000448850 SSH1Q8WYL5 1049 aa18.72■□□□□ 0.59
APP-210ENST00000448850 EP400Q96L91 3159 aa18.72■□□□□ 0.59
APP-210ENST00000448850 BCAR3O75815 825 aa18.72■□□□□ 0.59
APP-210ENST00000448850 PELP1Q8IZL8 1130 aaKnown RBP18.72■□□□□ 0.59
APP-210ENST00000448850 SMARCC1Q92922 1105 aaPredicted RBP18.72■□□□□ 0.59
APP-210ENST00000448850 CHMP4AQ9BY43 222 aa18.72■□□□□ 0.59
APP-210ENST00000448850 CICQ96RK0 1608 aaPredicted RBP18.71■□□□□ 0.59
APP-210ENST00000448850 PRAMEF22A3QJZ6 481 aa18.71■□□□□ 0.59
APP-210ENST00000448850 BCL2L13Q9BXK5 485 aa18.71■□□□□ 0.59
APP-210ENST00000448850 BCL11BQ9C0K0 894 aaPredicted RBP18.71■□□□□ 0.59
APP-210ENST00000448850 SMC4Q9NTJ3 1288 aa18.71■□□□□ 0.59
APP-210ENST00000448850 HDGFL1Q5TGJ6 251 aa18.7■□□□□ 0.58
APP-210ENST00000448850 VSIG10Q8N0Z9 540 aa18.7■□□□□ 0.58
APP-210ENST00000448850 RBM42Q9BTD8 480 aaKnown RBP18.7■□□□□ 0.58
APP-210ENST00000448850 PALLDQ8WX93 1383 aa18.7■□□□□ 0.58
APP-210ENST00000448850 RNF123Q5XPI4 1314 aa18.7■□□□□ 0.58
APP-210ENST00000448850 EIF2S2P20042 333 aaKnown RBP18.7■□□□□ 0.58
APP-210ENST00000448850 CCDC30Q5VVM6 783 aa18.7■□□□□ 0.58
APP-210ENST00000448850 TCERG1O14776 1098 aaKnown RBP18.69■□□□□ 0.58
APP-210ENST00000448850 MRPL50Q8N5N7 158 aaKnown RBP18.68■□□□□ 0.58
APP-210ENST00000448850 NECTIN2Q92692 538 aa18.68■□□□□ 0.58
APP-210ENST00000448850 USP16Q9Y5T5 823 aa18.68■□□□□ 0.58
APP-210ENST00000448850 TAF1LQ8IZX4 1826 aa18.68■□□□□ 0.58
APP-210ENST00000448850 COL5A3P25940 1745 aaPredicted RBP18.68■□□□□ 0.58
APP-210ENST00000448850 TNS1Q9HBL0 1735 aaKnown RBP18.68■□□□□ 0.58
APP-210ENST00000448850 TRIM37O94972 964 aa18.67■□□□□ 0.58
APP-210ENST00000448850 BRPF1P55201 1214 aaPredicted RBP18.67■□□□□ 0.58
APP-210ENST00000448850 STK31Q9BXU1 1019 aa18.67■□□□□ 0.58
APP-210ENST00000448850 RRP1P56182 461 aaKnown RBP18.67■□□□□ 0.58
APP-210ENST00000448850 SLC4A9Q96Q91 983 aa18.67■□□□□ 0.58
APP-210ENST00000448850 TEX13AQ9BXU3 409 aaPredicted RBP18.66■□□□□ 0.58
APP-210ENST00000448850 LOC102724428A0A0B4J2F2 783 aa18.65■□□□□ 0.58
APP-210ENST00000448850 SLC4A2P04920 1241 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms