RNA–Protein interactions for RNA: ENST00000448333.1

KCTD3-202, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 2

Gene KCTD3, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-202ENST00000448333 ERVV-2B6SEH9 535 aa13.03□□□□□ -0.32
KCTD3-202ENST00000448333 DIAPH1O60610 1272 aaKnown RBP13.03□□□□□ -0.32
KCTD3-202ENST00000448333 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
KCTD3-202ENST00000448333 FLAD1Q8NFF5 587 aa13.03□□□□□ -0.32
KCTD3-202ENST00000448333 LINC00116Q8NCU8 138 aa13.02□□□□□ -0.33
KCTD3-202ENST00000448333 U2SURPO15042 1029 aaKnown RBP13.01□□□□□ -0.33
KCTD3-202ENST00000448333 ITPK1Q13572 414 aa13.01□□□□□ -0.33
KCTD3-202ENST00000448333 NFATC2IPQ8NCF5 419 aa13.01□□□□□ -0.33
KCTD3-202ENST00000448333 TUBGCP6Q96RT7 1819 aa13□□□□□ -0.33
KCTD3-202ENST00000448333 C5P01031 1676 aa13□□□□□ -0.33
KCTD3-202ENST00000448333 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
KCTD3-202ENST00000448333 GNPATO15228 680 aa13□□□□□ -0.33
KCTD3-202ENST00000448333 GPR162Q16538 588 aa13□□□□□ -0.33
KCTD3-202ENST00000448333 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
KCTD3-202ENST00000448333 PTCD1O75127 700 aaKnown RBP12.99□□□□□ -0.33
KCTD3-202ENST00000448333 PLEKHG2Q9H7P9 1386 aa12.98□□□□□ -0.33
KCTD3-202ENST00000448333 AKAP4Q5JQC9 854 aa12.98□□□□□ -0.33
KCTD3-202ENST00000448333 QSER1Q2KHR3 1735 aa12.98□□□□□ -0.33
KCTD3-202ENST00000448333 KDM6AO15550 1401 aaPredicted RBP12.97□□□□□ -0.33
KCTD3-202ENST00000448333 TAF1LQ8IZX4 1826 aa12.97□□□□□ -0.33
KCTD3-202ENST00000448333 KDRP35968 1356 aa12.97□□□□□ -0.33
KCTD3-202ENST00000448333 C4BP0C0L5 1744 aa12.97□□□□□ -0.33
KCTD3-202ENST00000448333 SSFA2P28290 1259 aa12.97□□□□□ -0.33
KCTD3-202ENST00000448333 MTHFSDQ2M296 383 aaKnown RBP12.97□□□□□ -0.33
KCTD3-202ENST00000448333 NLGN2Q8NFZ4 835 aa12.97□□□□□ -0.33
KCTD3-202ENST00000448333 SLC4A9Q96Q91 983 aa12.97□□□□□ -0.33
KCTD3-202ENST00000448333 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
KCTD3-202ENST00000448333 TRAPPC3LQ5T215 181 aa12.96□□□□□ -0.33
KCTD3-202ENST00000448333 CFAP53Q96M91 514 aa12.96□□□□□ -0.33
KCTD3-202ENST00000448333 RTCBQ9Y3I0 505 aaKnown RBP12.96□□□□□ -0.33
KCTD3-202ENST00000448333 NPC1L1Q9UHC9 1359 aa12.95□□□□□ -0.34
KCTD3-202ENST00000448333 RNMTO43148 476 aaKnown RBP12.95□□□□□ -0.34
KCTD3-202ENST00000448333 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
KCTD3-202ENST00000448333 MAP3K5Q99683 1374 aa12.94□□□□□ -0.34
KCTD3-202ENST00000448333 SLC39A6Q13433 755 aa12.94□□□□□ -0.34
KCTD3-202ENST00000448333 SLC52A2Q9HAB3 445 aa12.94□□□□□ -0.34
KCTD3-202ENST00000448333 RFC4P35249 363 aa12.93□□□□□ -0.34
KCTD3-202ENST00000448333 ARHGEF1Q92888 912 aaKnown RBP12.93□□□□□ -0.34
KCTD3-202ENST00000448333 WWC3Q9ULE0 1092 aa12.93□□□□□ -0.34
KCTD3-202ENST00000448333 NUDCQ9Y266 331 aa12.93□□□□□ -0.34
KCTD3-202ENST00000448333 PPP2R1AP30153 589 aa12.92□□□□□ -0.34
KCTD3-202ENST00000448333 RC3H1Q5TC82 1133 aaKnown RBP12.92□□□□□ -0.34
KCTD3-202ENST00000448333 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
KCTD3-202ENST00000448333 RPS6KA4O75676 772 aa12.91□□□□□ -0.34
KCTD3-202ENST00000448333 MMP10P09238 476 aa12.91□□□□□ -0.34
KCTD3-202ENST00000448333 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
KCTD3-202ENST00000448333 CRKLP46109 303 aaKnown RBP12.91□□□□□ -0.34
KCTD3-202ENST00000448333 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
KCTD3-202ENST00000448333 GAS2L2Q8NHY3 880 aa12.91□□□□□ -0.34
KCTD3-202ENST00000448333 CD2APQ9Y5K6 639 aa12.91□□□□□ -0.34
KCTD3-202ENST00000448333 CNTNAP4Q9C0A0 1308 aa12.9□□□□□ -0.34
KCTD3-202ENST00000448333 PRKAR2BP31323 418 aa12.9□□□□□ -0.34
KCTD3-202ENST00000448333 DNAJC10Q8IXB1 793 aa12.9□□□□□ -0.34
KCTD3-202ENST00000448333 COL24A1Q17RW2 1714 aa12.89□□□□□ -0.35
KCTD3-202ENST00000448333 GNAT3A8MTJ3 354 aa12.89□□□□□ -0.35
KCTD3-202ENST00000448333 TEFQ10587 303 aa12.89□□□□□ -0.35
KCTD3-202ENST00000448333 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
KCTD3-202ENST00000448333 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
KCTD3-202ENST00000448333 PHACTR3Q96KR7 559 aa12.89□□□□□ -0.35
KCTD3-202ENST00000448333 GRIN3BO60391 1043 aa12.88□□□□□ -0.35
KCTD3-202ENST00000448333 YBX3P16989 372 aaKnown RBP eCLIP12.88□□□□□ -0.35
KCTD3-202ENST00000448333 COL3A1P02461 1466 aaPredicted RBP12.88□□□□□ -0.35
KCTD3-202ENST00000448333 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
KCTD3-202ENST00000448333 GYS1P13807 737 aa12.87□□□□□ -0.35
KCTD3-202ENST00000448333 ZNF784Q8NCA9 323 aaPredicted RBP12.87□□□□□ -0.35
KCTD3-202ENST00000448333 IL17REQ8NFR9 667 aa12.87□□□□□ -0.35
KCTD3-202ENST00000448333 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
KCTD3-202ENST00000448333 SRP68Q9UHB9 627 aaKnown RBP12.87□□□□□ -0.35
KCTD3-202ENST00000448333 PARP3Q9Y6F1 533 aa12.87□□□□□ -0.35
KCTD3-202ENST00000448333 INTS5Q6P9B9 1019 aaKnown RBP12.86□□□□□ -0.35
KCTD3-202ENST00000448333 CCDC87Q9NVE4 849 aa12.86□□□□□ -0.35
KCTD3-202ENST00000448333 UTRNP46939 3433 aa12.86□□□□□ -0.35
KCTD3-202ENST00000448333 MYH14Q7Z406 1995 aaKnown RBP12.85□□□□□ -0.35
KCTD3-202ENST00000448333 ZPR1O75312 459 aa12.85□□□□□ -0.35
KCTD3-202ENST00000448333 CYP19A1P11511 503 aaPredicted RBP12.85□□□□□ -0.35
KCTD3-202ENST00000448333 CANXP27824 592 aaKnown RBP12.85□□□□□ -0.35
KCTD3-202ENST00000448333 RTF1Q92541 710 aaKnown RBP12.85□□□□□ -0.35
KCTD3-202ENST00000448333 BTBD11A6QL63 1104 aa12.84□□□□□ -0.35
KCTD3-202ENST00000448333 FCHSD2O94868 740 aa12.84□□□□□ -0.35
KCTD3-202ENST00000448333 NEFMP07197 916 aa12.84□□□□□ -0.35
KCTD3-202ENST00000448333 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
KCTD3-202ENST00000448333 FKBP8Q14318 412 aa12.84□□□□□ -0.35
KCTD3-202ENST00000448333 USPL1Q5W0Q7 1092 aa12.84□□□□□ -0.35
KCTD3-202ENST00000448333 ZNF330Q9Y3S2 320 aaPredicted RBP12.84□□□□□ -0.35
KCTD3-202ENST00000448333 CHD4Q14839 1912 aa12.84□□□□□ -0.35
KCTD3-202ENST00000448333 COL5A3P25940 1745 aaPredicted RBP12.83□□□□□ -0.36
KCTD3-202ENST00000448333 A0A0G2JLW4 131 aa12.83□□□□□ -0.36
KCTD3-202ENST00000448333 STARD3NLO95772 234 aa12.83□□□□□ -0.36
KCTD3-202ENST00000448333 ZNF790Q6PG37 636 aa12.83□□□□□ -0.36
KCTD3-202ENST00000448333 POTEHQ6S545 545 aa12.83□□□□□ -0.36
KCTD3-202ENST00000448333 MCM10Q7L590 875 aa12.83□□□□□ -0.36
KCTD3-202ENST00000448333 ZNF496Q96IT1 587 aaPredicted RBP12.83□□□□□ -0.36
KCTD3-202ENST00000448333 ZBTB1Q9Y2K1 713 aa12.83□□□□□ -0.36
KCTD3-202ENST00000448333 ZNF831Q5JPB2 1677 aa12.83□□□□□ -0.36
KCTD3-202ENST00000448333 DCTN1Q14203 1278 aa12.82□□□□□ -0.36
KCTD3-202ENST00000448333 VSIG10Q8N0Z9 540 aa12.82□□□□□ -0.36
KCTD3-202ENST00000448333 VIRMAQ69YN4 1812 aaKnown RBP12.82□□□□□ -0.36
KCTD3-202ENST00000448333 MRC1P22897 1456 aa12.82□□□□□ -0.36
KCTD3-202ENST00000448333 USP42Q9H9J4 1324 aaKnown RBP12.82□□□□□ -0.36
KCTD3-202ENST00000448333 TJP1Q07157 1748 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms