RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CABP4P57796 275 aa25.32■■□□□ 1.64
SGCE-207ENST00000447873 MARCH10Q8NA82 808 aaPredicted RBP25.32■■□□□ 1.64
SGCE-207ENST00000447873 MRC1P22897 1456 aa25.32■■□□□ 1.64
SGCE-207ENST00000447873 SEPT12Q8IYM1 358 aa25.31■■□□□ 1.64
SGCE-207ENST00000447873 NFATC2IPQ8NCF5 419 aa25.31■■□□□ 1.64
SGCE-207ENST00000447873 KAT6BQ8WYB5 2073 aa25.31■■□□□ 1.64
SGCE-207ENST00000447873 BTBD11A6QL63 1104 aa25.31■■□□□ 1.64
SGCE-207ENST00000447873 TOGARAM1Q9Y4F4 1720 aa25.3■■□□□ 1.64
SGCE-207ENST00000447873 EXOSC9Q06265 439 aaKnown RBP25.3■■□□□ 1.64
SGCE-207ENST00000447873 RGS17Q9UGC6 210 aaPredicted RBP25.3■■□□□ 1.64
SGCE-207ENST00000447873 KDM3BQ7LBC6 1761 aa25.28■■□□□ 1.64
SGCE-207ENST00000447873 RXRBP28702 533 aa25.27■■□□□ 1.64
SGCE-207ENST00000447873 ITGB4P16144 1822 aa25.26■■□□□ 1.63
SGCE-207ENST00000447873 DOT1LQ8TEK3 1739 aa25.26■■□□□ 1.63
SGCE-207ENST00000447873 TMOD3Q9NYL9 352 aa25.26■■□□□ 1.63
SGCE-207ENST00000447873 RCAN3Q9UKA8 241 aa25.24■■□□□ 1.63
SGCE-207ENST00000447873 CT47B1P0C2W7 299 aaPredicted RBP25.23■■□□□ 1.63
SGCE-207ENST00000447873 BRWD3Q6RI45 1802 aa25.23■■□□□ 1.63
SGCE-207ENST00000447873 POTEAQ6S8J7 498 aa25.22■■□□□ 1.63
SGCE-207ENST00000447873 SYTL4Q96C24 671 aaPredicted RBP25.22■■□□□ 1.63
SGCE-207ENST00000447873 C8orf58Q8NAV2 365 aa25.22■■□□□ 1.63
SGCE-207ENST00000447873 ELL2O00472 640 aaPredicted RBP25.21■■□□□ 1.63
SGCE-207ENST00000447873 KCNQ3O43525 872 aa25.21■■□□□ 1.63
SGCE-207ENST00000447873 PRIM1P49642 420 aaKnown RBP25.21■■□□□ 1.63
SGCE-207ENST00000447873 SLC39A6Q13433 755 aa25.21■■□□□ 1.63
SGCE-207ENST00000447873 TWISTNBQ3B726 338 aaPredicted RBP25.21■■□□□ 1.63
SGCE-207ENST00000447873 ZNF790Q6PG37 636 aa25.21■■□□□ 1.63
SGCE-207ENST00000447873 TTC5Q8N0Z6 440 aa25.21■■□□□ 1.63
SGCE-207ENST00000447873 KRT24Q2M2I5 525 aa25.2■■□□□ 1.62
SGCE-207ENST00000447873 TSPYL6Q8N831 410 aa25.2■■□□□ 1.62
SGCE-207ENST00000447873 ACSBG1Q96GR2 724 aa25.2■■□□□ 1.62
SGCE-207ENST00000447873 EIF4A1P60842 406 aaKnown RBP25.19■■□□□ 1.62
SGCE-207ENST00000447873 KRT27Q7Z3Y8 459 aa25.19■■□□□ 1.62
SGCE-207ENST00000447873 PIGBQ92521 554 aa25.19■■□□□ 1.62
SGCE-207ENST00000447873 FAM182BQ5T319 152 aa25.18■■□□□ 1.62
SGCE-207ENST00000447873 BCL9O00512 1426 aa25.18■■□□□ 1.62
SGCE-207ENST00000447873 VAMP4O75379 141 aa25.18■■□□□ 1.62
SGCE-207ENST00000447873 PAPPAQ13219 1627 aa25.17■■□□□ 1.62
SGCE-207ENST00000447873 ZNF428Q96B54 188 aa25.15■■□□□ 1.62
SGCE-207ENST00000447873 SUPT16HQ9Y5B9 1047 aaKnown RBP25.15■■□□□ 1.62
SGCE-207ENST00000447873 RGS12O14924 1447 aa25.14■■□□□ 1.62
SGCE-207ENST00000447873 SOS1Q07889 1333 aaPredicted RBP25.14■■□□□ 1.61
SGCE-207ENST00000447873 RARSP54136 660 aaKnown RBP25.14■■□□□ 1.61
SGCE-207ENST00000447873 FMNL2Q96PY5 1086 aa25.14■■□□□ 1.61
SGCE-207ENST00000447873 UBR2Q8IWV8 1755 aa25.13■■□□□ 1.61
SGCE-207ENST00000447873 ZNF496Q96IT1 587 aaPredicted RBP25.13■■□□□ 1.61
SGCE-207ENST00000447873 ASAP1Q9ULH1 1129 aa25.13■■□□□ 1.61
SGCE-207ENST00000447873 SBF2Q86WG5 1849 aa25.12■■□□□ 1.61
SGCE-207ENST00000447873 KCNQ2O43526 872 aa25.12■■□□□ 1.61
SGCE-207ENST00000447873 ATG3Q9NT62 314 aa25.12■■□□□ 1.61
SGCE-207ENST00000447873 FAM196AQ6ZSG2 479 aa25.11■■□□□ 1.61
SGCE-207ENST00000447873 NHSQ6T4R5 1651 aa25.11■■□□□ 1.61
SGCE-207ENST00000447873 HEG1Q9ULI3 1381 aa25.11■■□□□ 1.61
SGCE-207ENST00000447873 GIGYF1O75420 1035 aaPredicted RBP25.1■■□□□ 1.61
SGCE-207ENST00000447873 HOXB7P09629 217 aa25.1■■□□□ 1.61
SGCE-207ENST00000447873 BCAR3O75815 825 aa25.1■■□□□ 1.61
SGCE-207ENST00000447873 ALDH1L2Q3SY69 923 aa25.1■■□□□ 1.61
SGCE-207ENST00000447873 SSH1Q8WYL5 1049 aa25.1■■□□□ 1.61
SGCE-207ENST00000447873 BCL2L13Q9BXK5 485 aa25.1■■□□□ 1.61
SGCE-207ENST00000447873 KCPQ6ZWJ8 1503 aa25.09■■□□□ 1.61
SGCE-207ENST00000447873 PTCD1O75127 700 aaKnown RBP25.09■■□□□ 1.61
SGCE-207ENST00000447873 SMC4Q9NTJ3 1288 aa25.09■■□□□ 1.61
SGCE-207ENST00000447873 CHMP4AQ9BY43 222 aa25.08■■□□□ 1.61
SGCE-207ENST00000447873 SNRPA1P09661 255 aaKnown RBP25.07■■□□□ 1.6
SGCE-207ENST00000447873 C5P01031 1676 aa25.07■■□□□ 1.6
SGCE-207ENST00000447873 HDGFL1Q5TGJ6 251 aa25.06■■□□□ 1.6
SGCE-207ENST00000447873 CCDC30Q5VVM6 783 aa25.06■■□□□ 1.6
SGCE-207ENST00000447873 BTAF1O14981 1849 aa25.06■■□□□ 1.6
SGCE-207ENST00000447873 TCERG1O14776 1098 aaKnown RBP25.05■■□□□ 1.6
SGCE-207ENST00000447873 EIF2S2P20042 333 aaKnown RBP25.05■■□□□ 1.6
SGCE-207ENST00000447873 RBM42Q9BTD8 480 aaKnown RBP25.05■■□□□ 1.6
SGCE-207ENST00000447873 PRAMEF22A3QJZ6 481 aa25.05■■□□□ 1.6
SGCE-207ENST00000447873 NECTIN2Q92692 538 aa25.05■■□□□ 1.6
SGCE-207ENST00000447873 SMARCC1Q92922 1105 aaPredicted RBP25.05■■□□□ 1.6
SGCE-207ENST00000447873 RRP1P56182 461 aaKnown RBP25.04■■□□□ 1.6
SGCE-207ENST00000447873 PTF1AQ7RTS3 328 aa25.04■■□□□ 1.6
SGCE-207ENST00000447873 STK31Q9BXU1 1019 aa25.04■■□□□ 1.6
SGCE-207ENST00000447873 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.03■■□□□ 1.6
SGCE-207ENST00000447873 RNF123Q5XPI4 1314 aa25.03■■□□□ 1.6
SGCE-207ENST00000447873 VSIG10Q8N0Z9 540 aa25.02■■□□□ 1.6
SGCE-207ENST00000447873 BCL11BQ9C0K0 894 aaPredicted RBP25.02■■□□□ 1.6
SGCE-207ENST00000447873 CACNA1FO60840 1977 aa25.02■■□□□ 1.6
SGCE-207ENST00000447873 LAMB4A4D0S4 1761 aa25.02■■□□□ 1.6
SGCE-207ENST00000447873 CANXP27824 592 aaKnown RBP25.01■■□□□ 1.59
SGCE-207ENST00000447873 MRPL50Q8N5N7 158 aaKnown RBP25.01■■□□□ 1.59
SGCE-207ENST00000447873 FRAT1Q92837 279 aaPredicted RBP25.01■■□□□ 1.59
SGCE-207ENST00000447873 PALLDQ8WX93 1383 aa25.01■■□□□ 1.59
SGCE-207ENST00000447873 PLIN1O60240 522 aa25■■□□□ 1.59
SGCE-207ENST00000447873 SLC4A2P04920 1241 aa25■■□□□ 1.59
SGCE-207ENST00000447873 BRPF1P55201 1214 aaPredicted RBP25■■□□□ 1.59
SGCE-207ENST00000447873 USP16Q9Y5T5 823 aa25■■□□□ 1.59
SGCE-207ENST00000447873 KIF16BQ96L93 1317 aa25■■□□□ 1.59
SGCE-207ENST00000447873 EP400Q96L91 3159 aa24.99■■□□□ 1.59
SGCE-207ENST00000447873 TEX13AQ9BXU3 409 aaPredicted RBP24.99■■□□□ 1.59
SGCE-207ENST00000447873 TRIM37O94972 964 aa24.98■■□□□ 1.59
SGCE-207ENST00000447873 LOC102724428A0A0B4J2F2 783 aa24.97■■□□□ 1.59
SGCE-207ENST00000447873 SIK1P57059 783 aa24.97■■□□□ 1.59
SGCE-207ENST00000447873 CHPF2Q9P2E5 772 aa24.97■■□□□ 1.59
SGCE-207ENST00000447873 NOB1Q9ULX3 412 aaKnown RBP24.97■■□□□ 1.59
SGCE-207ENST00000447873 SLC4A9Q96Q91 983 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms