RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 ABCC6O95255 1503 aa24.43■■□□□ 1.5
FAM3A-215ENST00000447601 RNMTO43148 476 aaKnown RBP24.43■■□□□ 1.5
FAM3A-215ENST00000447601 EIF4A1P60842 406 aaKnown RBP24.43■■□□□ 1.5
FAM3A-215ENST00000447601 SLC4A10Q6U841 1118 aa24.43■■□□□ 1.5
FAM3A-215ENST00000447601 FKBP5Q13451 457 aaPredicted RBP24.42■■□□□ 1.5
FAM3A-215ENST00000447601 MPRIPQ6WCQ1 1025 aa24.42■■□□□ 1.5
FAM3A-215ENST00000447601 MEIS3Q99687 375 aa24.42■■□□□ 1.5
FAM3A-215ENST00000447601 F6X3S4 739 aa24.42■■□□□ 1.5
FAM3A-215ENST00000447601 CEP85Q6P2H3 762 aa24.42■■□□□ 1.5
FAM3A-215ENST00000447601 DCTPP1Q9H773 170 aa24.42■■□□□ 1.5
FAM3A-215ENST00000447601 DAXXQ9UER7 740 aaPredicted RBP24.42■■□□□ 1.5
FAM3A-215ENST00000447601 BTBD11A6QL63 1104 aa24.41■■□□□ 1.5
FAM3A-215ENST00000447601 BRINP3Q76B58 766 aa24.4■■□□□ 1.5
FAM3A-215ENST00000447601 RAPGEF4Q8WZA2 1011 aa24.4■■□□□ 1.5
FAM3A-215ENST00000447601 NECTIN2Q92692 538 aa24.4■■□□□ 1.5
FAM3A-215ENST00000447601 NLRP2Q9NX02 1062 aa24.4■■□□□ 1.5
FAM3A-215ENST00000447601 PLEKHG2Q9H7P9 1386 aa24.39■■□□□ 1.5
FAM3A-215ENST00000447601 PXDNLA1KZ92 1463 aa24.39■■□□□ 1.49
FAM3A-215ENST00000447601 STRCQ7RTU9 1775 aa24.38■■□□□ 1.49
FAM3A-215ENST00000447601 CPDO75976 1380 aa24.38■■□□□ 1.49
FAM3A-215ENST00000447601 KDM3BQ7LBC6 1761 aa24.38■■□□□ 1.49
FAM3A-215ENST00000447601 BMP2KLQ5H9B9 411 aa24.38■■□□□ 1.49
FAM3A-215ENST00000447601 CABLES1Q8TDN4 633 aa24.38■■□□□ 1.49
FAM3A-215ENST00000447601 HMMRO75330 724 aa24.37■■□□□ 1.49
FAM3A-215ENST00000447601 TATP17735 454 aaPredicted RBP24.36■■□□□ 1.49
FAM3A-215ENST00000447601 TBC1D32Q96NH3 1257 aa24.36■■□□□ 1.49
FAM3A-215ENST00000447601 XIRP1Q702N8 1843 aaKnown RBP24.36■■□□□ 1.49
FAM3A-215ENST00000447601 GNAI3P08754 354 aa24.35■■□□□ 1.49
FAM3A-215ENST00000447601 CSB-PGBD3P0DP91 1061 aa24.35■■□□□ 1.49
FAM3A-215ENST00000447601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.35■■□□□ 1.49
FAM3A-215ENST00000447601 ZNF335Q9H4Z2 1342 aaPredicted RBP24.35■■□□□ 1.49
FAM3A-215ENST00000447601 GNAI2P04899 355 aa24.35■■□□□ 1.49
FAM3A-215ENST00000447601 SPG7Q9UQ90 795 aa24.34■■□□□ 1.49
FAM3A-215ENST00000447601 COL18A1P39060 1754 aa24.34■■□□□ 1.49
FAM3A-215ENST00000447601 KCNQ3O43525 872 aa24.33■■□□□ 1.49
FAM3A-215ENST00000447601 EIF2S2P20042 333 aaKnown RBP24.33■■□□□ 1.49
FAM3A-215ENST00000447601 SLAIN2Q9P270 581 aa24.33■■□□□ 1.49
FAM3A-215ENST00000447601 RGPD5Q99666 1765 aa24.32■■□□□ 1.48
FAM3A-215ENST00000447601 CRYBG1Q9Y4K1 1723 aa24.32■■□□□ 1.48
FAM3A-215ENST00000447601 CHRNA2Q15822 529 aa24.31■■□□□ 1.48
FAM3A-215ENST00000447601 ADAMTS7Q9UKP4 1686 aa24.31■■□□□ 1.48
FAM3A-215ENST00000447601 PHAXQ9H814 394 aaKnown RBP24.31■■□□□ 1.48
FAM3A-215ENST00000447601 CHPF2Q9P2E5 772 aa24.31■■□□□ 1.48
FAM3A-215ENST00000447601 CACNA1FO60840 1977 aa24.31■■□□□ 1.48
FAM3A-215ENST00000447601 SOS2Q07890 1332 aaPredicted RBP24.3■■□□□ 1.48
FAM3A-215ENST00000447601 HEG1Q9ULI3 1381 aa24.29■■□□□ 1.48
FAM3A-215ENST00000447601 MEGF6O75095 1541 aa24.29■■□□□ 1.48
FAM3A-215ENST00000447601 PHKG2P15735 406 aa24.28■■□□□ 1.48
FAM3A-215ENST00000447601 BECN1Q14457 450 aa24.28■■□□□ 1.48
FAM3A-215ENST00000447601 GIGYF1O75420 1035 aaPredicted RBP24.28■■□□□ 1.48
FAM3A-215ENST00000447601 MFAP1P55081 439 aaKnown RBP24.28■■□□□ 1.48
FAM3A-215ENST00000447601 DBF4Q9UBU7 674 aaPredicted RBP24.28■■□□□ 1.48
FAM3A-215ENST00000447601 SLC4A3P48751 1232 aa24.27■■□□□ 1.48
FAM3A-215ENST00000447601 IFNL2Q8IZJ0 200 aa24.27■■□□□ 1.48
FAM3A-215ENST00000447601 PLEKHM2Q8IWE5 1019 aa24.26■■□□□ 1.47
FAM3A-215ENST00000447601 N4BP2Q86UW6 1770 aaPredicted RBP24.26■■□□□ 1.47
FAM3A-215ENST00000447601 C22orf23Q9BZE7 217 aa24.26■■□□□ 1.47
FAM3A-215ENST00000447601 SRCIN1Q9C0H9 1055 aa24.26■■□□□ 1.47
FAM3A-215ENST00000447601 SLC52A2Q9HAB3 445 aa24.25■■□□□ 1.47
FAM3A-215ENST00000447601 KDM6AO15550 1401 aaPredicted RBP24.25■■□□□ 1.47
FAM3A-215ENST00000447601 UBTFL1P0CB47 393 aaPredicted RBP24.24■■□□□ 1.47
FAM3A-215ENST00000447601 DNAAF4Q8WXU2 420 aa24.24■■□□□ 1.47
FAM3A-215ENST00000447601 USP44Q9H0E7 712 aa24.24■■□□□ 1.47
FAM3A-215ENST00000447601 PRDM11Q9NQV5 511 aa24.24■■□□□ 1.47
FAM3A-215ENST00000447601 SIPA1L3O60292 1781 aaPredicted RBP24.23■■□□□ 1.47
FAM3A-215ENST00000447601 HSP90AB1P08238 724 aaKnown RBP24.23■■□□□ 1.47
FAM3A-215ENST00000447601 ATP8B2P98198 1209 aa24.23■■□□□ 1.47
FAM3A-215ENST00000447601 NBR1Q14596 966 aa24.22■■□□□ 1.47
FAM3A-215ENST00000447601 DCAF5Q96JK2 942 aa24.22■■□□□ 1.47
FAM3A-215ENST00000447601 EIF5BO60841 1220 aaKnown RBP24.21■■□□□ 1.47
FAM3A-215ENST00000447601 WDR17Q8IZU2 1322 aa24.21■■□□□ 1.47
FAM3A-215ENST00000447601 PI4KAP2A4QPH2 592 aa24.21■■□□□ 1.47
FAM3A-215ENST00000447601 TTC22Q5TAA0 569 aa24.21■■□□□ 1.47
FAM3A-215ENST00000447601 ZNF790Q6PG37 636 aa24.21■■□□□ 1.47
FAM3A-215ENST00000447601 PI4KAP1Q8N8J0 262 aa24.21■■□□□ 1.47
FAM3A-215ENST00000447601 LRRFIP2Q9Y608 721 aaKnown RBP24.21■■□□□ 1.47
FAM3A-215ENST00000447601 BEND3Q5T5X7 828 aa24.2■■□□□ 1.46
FAM3A-215ENST00000447601 HYPKQ9NX55 129 aa24.2■■□□□ 1.46
FAM3A-215ENST00000447601 CDC45O75419 566 aa24.19■■□□□ 1.46
FAM3A-215ENST00000447601 GSPT1P15170 499 aaKnown RBP24.19■■□□□ 1.46
FAM3A-215ENST00000447601 APBB1O00213 710 aa24.19■■□□□ 1.46
FAM3A-215ENST00000447601 C16orf71Q8IYS4 520 aaPredicted RBP24.19■■□□□ 1.46
FAM3A-215ENST00000447601 MRC1P22897 1456 aa24.19■■□□□ 1.46
FAM3A-215ENST00000447601 ADCY9O60503 1353 aa24.18■■□□□ 1.46
FAM3A-215ENST00000447601 CYP27B1O15528 508 aa24.18■■□□□ 1.46
FAM3A-215ENST00000447601 SMARCA5O60264 1052 aaPredicted RBP24.18■■□□□ 1.46
FAM3A-215ENST00000447601 TBC1D9Q6ZT07 1266 aa24.18■■□□□ 1.46
FAM3A-215ENST00000447601 PNMA6EA0A0J9YXQ4 647 aa24.17■■□□□ 1.46
FAM3A-215ENST00000447601 ANXA1P04083 346 aa24.17■■□□□ 1.46
FAM3A-215ENST00000447601 NFATC2IPQ8NCF5 419 aa24.17■■□□□ 1.46
FAM3A-215ENST00000447601 PKD1L3Q7Z443 1732 aa24.17■■□□□ 1.46
FAM3A-215ENST00000447601 RBM25P49756 843 aaKnown RBP24.17■■□□□ 1.46
FAM3A-215ENST00000447601 DDX21Q9NR30 783 aaKnown RBP eCLIP24.17■■□□□ 1.46
FAM3A-215ENST00000447601 SCN11AQ9UI33 1791 aa24.16■■□□□ 1.46
FAM3A-215ENST00000447601 PRAMEF22A3QJZ6 481 aa24.15■■□□□ 1.46
FAM3A-215ENST00000447601 RTL5Q5HYW3 569 aaPredicted RBP24.15■■□□□ 1.46
FAM3A-215ENST00000447601 KSR2Q6VAB6 950 aa24.15■■□□□ 1.46
FAM3A-215ENST00000447601 TOM1L2Q6ZVM7 507 aa24.15■■□□□ 1.46
FAM3A-215ENST00000447601 OTUD7AQ8TE49 926 aaPredicted RBP24.15■■□□□ 1.46
FAM3A-215ENST00000447601 LRRCC1Q9C099 1032 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms