RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 PPFIA4O75335 1185 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 MAGEA8P43361 318 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 SLC8A3P57103 927 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 DYNC1I2Q13409 638 aaKnown RBP3.4□□□□□ -1.86
CHD9-203ENST00000447540 C8orf34Q49A92 452 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 CEP135Q66GS9 1140 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 MKL1Q969V6 931 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 CABS1Q96KC9 395 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 CCDC175P0C221 793 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 UIMC1Q96RL1 719 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 MYO1BO43795 1136 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 PSMC1P62191 440 aaKnown RBP3.4□□□□□ -1.86
CHD9-203ENST00000447540 HDGFL1Q5TGJ6 251 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 TSHZ1Q6ZSZ6 1077 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 C10orf67Q8IYJ2 551 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 BICD2Q8TD16 824 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 BHMTQ93088 406 aa3.4□□□□□ -1.86
CHD9-203ENST00000447540 LRPPRCP42704 1394 aaKnown RBP3.4□□□□□ -1.86
CHD9-203ENST00000447540 POLR1AO95602 1720 aaPredicted RBP3.4□□□□□ -1.86
CHD9-203ENST00000447540 KIF5CO60282 957 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 DRP2Q13474 957 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 RPGRIP1Q96KN7 1286 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 VCX3BQ9H321 246 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 VCX3AQ9NNX9 186 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 ABCA5Q8WWZ7 1642 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 ENO4A6NNW6 628 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 SRGAP3O43295 1099 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 SRLQ86TD4 932 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 GCC1Q96CN9 775 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 GNL3LQ9NVN8 582 aaKnown RBP3.4□□□□□ -1.87
CHD9-203ENST00000447540 FYCO1Q9BQS8 1478 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 REREQ9P2R6 1566 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 CDKL5O76039 1030 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 PPP1R14BQ96C90 147 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 HOOK1Q9UJC3 728 aaKnown RBP3.4□□□□□ -1.87
CHD9-203ENST00000447540 FHOD3Q2V2M9 1422 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 ANKRD36BQ8N2N9 1353 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 ERICH4A6NGS2 130 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 NAP1L1P55209 391 aaKnown RBP3.4□□□□□ -1.87
CHD9-203ENST00000447540 MTA1Q13330 715 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 HDXQ7Z353 690 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 FMNL2Q96PY5 1086 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 CACNA1FO60840 1977 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 ZNHIT6Q9NWK9 470 aaKnown RBP3.4□□□□□ -1.87
CHD9-203ENST00000447540 INTS3Q68E01 1043 aaKnown RBP3.4□□□□□ -1.87
CHD9-203ENST00000447540 CCDC80Q76M96 950 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 KIAA1524Q8TCG1 905 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 PDS5BQ9NTI5 1447 aa3.4□□□□□ -1.87
CHD9-203ENST00000447540 SCAF11Q99590 1463 aaKnown RBP3.39□□□□□ -1.87
CHD9-203ENST00000447540 TADA2BQ86TJ2 420 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 HOMER1Q86YM7 354 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 MPHOSPH8Q99549 860 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 CTNNA3Q9UI47 895 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 TRAK1Q9UPV9 953 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 USH1CQ9Y6N9 552 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 ERC2O15083 957 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 HSPA4P34932 840 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 ZNF280CQ8ND82 737 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.39□□□□□ -1.87
CHD9-203ENST00000447540 PPP2R5AQ15172 486 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 BMP2KLQ5H9B9 411 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 JAKMIP2Q96AA8 810 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 SUFUQ9UMX1 484 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 DAAM1Q9Y4D1 1078 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 ZNF608Q9ULD9 1512 aaPredicted RBP3.39□□□□□ -1.87
CHD9-203ENST00000447540 KDM2BQ8NHM5 1336 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 RAD54L2Q9Y4B4 1467 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 FYB1O15117 783 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 CBFA2T2O43439 604 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 PPP1R12BO60237 982 aaPredicted RBP3.39□□□□□ -1.87
CHD9-203ENST00000447540 SLC4A3P48751 1232 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 SMARCC1Q92922 1105 aaPredicted RBP3.39□□□□□ -1.87
CHD9-203ENST00000447540 CDK5RAP3Q96JB5 506 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 KIF3BO15066 747 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 WHAMMP3Q1A5X7 153 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 ZKSCAN2Q63HK3 967 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 EXOC8Q8IYI6 725 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 CXorf38Q8TB03 319 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 GDAP1L1Q96MZ0 367 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 MRPS25P82663 173 aaKnown RBP3.39□□□□□ -1.87
CHD9-203ENST00000447540 GORABQ5T7V8 394 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 ZBTB12Q9Y330 459 aaPredicted RBP3.39□□□□□ -1.87
CHD9-203ENST00000447540 ZFXP17010 805 aaPredicted RBP3.39□□□□□ -1.87
CHD9-203ENST00000447540 CAPN2P17655 700 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 INPP5BP32019 993 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 ITPRIPQ8IWB1 547 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 RRP15Q9Y3B9 282 aaKnown RBP3.39□□□□□ -1.87
CHD9-203ENST00000447540 SFPQP23246 707 aaKnown RBP eCLIP3.39□□□□□ -1.874e-6■■■□□ 18.1
CHD9-203ENST00000447540 IMPACTQ9P2X3 320 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 CDC45O75419 566 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 TROVE2P10155 538 aaKnown RBP eCLIP3.39□□□□□ -1.87
CHD9-203ENST00000447540 UBE2HP62256 183 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 PLCB4Q15147 1175 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 ZSCAN23Q3MJ62 389 aa3.39□□□□□ -1.87
CHD9-203ENST00000447540 SCAND2PQ9GZW5 306 aaPredicted RBP3.39□□□□□ -1.87
CHD9-203ENST00000447540 MYCNP04198 464 aaPredicted RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 SLFN14P0C7P3 912 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 KIF5BP33176 963 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 GSCP56915 257 aaPredicted RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 ENOX2Q16206 610 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms