RNA–Protein interactions for RNA: ENST00000446933.1

KNOP1P3-201, Transcript of lysine rich nucleolar protein 1 pseudogene 3, humanhuman

BASIC

Gene KNOP1P3, Length 426 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P3-201ENST00000446933 PRKRIP1Q9H875 184 aaPredicted RBP6.91□□□□□ -1.3
KNOP1P3-201ENST00000446933 CCDC9Q9Y3X0 531 aaKnown RBP6.91□□□□□ -1.3
KNOP1P3-201ENST00000446933 PLSCR1O15162 318 aa6.9□□□□□ -1.3
KNOP1P3-201ENST00000446933 DIAPH1O60610 1272 aaKnown RBP6.9□□□□□ -1.3
KNOP1P3-201ENST00000446933 FCHSD2O94868 740 aa6.9□□□□□ -1.3
KNOP1P3-201ENST00000446933 PDE3BQ13370 1112 aa6.9□□□□□ -1.3
KNOP1P3-201ENST00000446933 IFNL1Q8IU54 200 aa6.9□□□□□ -1.3
KNOP1P3-201ENST00000446933 ZCRB1Q8TBF4 217 aaKnown RBP6.9□□□□□ -1.3
KNOP1P3-201ENST00000446933 RAPGEF4Q8WZA2 1011 aa6.9□□□□□ -1.3
KNOP1P3-201ENST00000446933 MEGF6O75095 1541 aa6.9□□□□□ -1.31
KNOP1P3-201ENST00000446933 MARCH10Q8NA82 808 aaPredicted RBP6.89□□□□□ -1.31
KNOP1P3-201ENST00000446933 CFAP53Q96M91 514 aa6.89□□□□□ -1.31
KNOP1P3-201ENST00000446933 USP35Q9P2H5 1018 aa6.89□□□□□ -1.31
KNOP1P3-201ENST00000446933 SPG7Q9UQ90 795 aa6.89□□□□□ -1.31
KNOP1P3-201ENST00000446933 MYBBP1AQ9BQG0 1328 aaKnown RBP6.89□□□□□ -1.31
KNOP1P3-201ENST00000446933 PCDH11XQ9BZA7 1347 aa6.89□□□□□ -1.31
KNOP1P3-201ENST00000446933 PCDH11YQ9BZA8 1340 aa6.89□□□□□ -1.31
KNOP1P3-201ENST00000446933 ADAMTS7Q9UKP4 1686 aa6.89□□□□□ -1.31
KNOP1P3-201ENST00000446933 TNS1Q9HBL0 1735 aaKnown RBP6.88□□□□□ -1.31
KNOP1P3-201ENST00000446933 NHSQ6T4R5 1651 aa6.88□□□□□ -1.31
KNOP1P3-201ENST00000446933 PPM1GO15355 546 aaPredicted RBP6.88□□□□□ -1.31
KNOP1P3-201ENST00000446933 MAP3K13O43283 966 aa6.88□□□□□ -1.31
KNOP1P3-201ENST00000446933 TATP17735 454 aaPredicted RBP6.88□□□□□ -1.31
KNOP1P3-201ENST00000446933 TNNT2P45379 298 aaPredicted RBP6.88□□□□□ -1.31
KNOP1P3-201ENST00000446933 FBXO22Q8NEZ5 403 aa6.88□□□□□ -1.31
KNOP1P3-201ENST00000446933 PNNQ9H307 717 aaKnown RBP6.88□□□□□ -1.31
KNOP1P3-201ENST00000446933 NUDCQ9Y266 331 aa6.88□□□□□ -1.31
KNOP1P3-201ENST00000446933 ZNF831Q5JPB2 1677 aa6.87□□□□□ -1.31
KNOP1P3-201ENST00000446933 ZBTB7CA1YPR0 619 aa6.87□□□□□ -1.31
KNOP1P3-201ENST00000446933 ERVV-2B6SEH9 535 aa6.87□□□□□ -1.31
KNOP1P3-201ENST00000446933 CYP27B1O15528 508 aa6.87□□□□□ -1.31
KNOP1P3-201ENST00000446933 HSP90AB1P08238 724 aaKnown RBP6.87□□□□□ -1.31
KNOP1P3-201ENST00000446933 PLEKHO1Q53GL0 409 aaPredicted RBP6.87□□□□□ -1.31
KNOP1P3-201ENST00000446933 IFNL2Q8IZJ0 200 aa6.87□□□□□ -1.31
KNOP1P3-201ENST00000446933 ITGB4P16144 1822 aa6.86□□□□□ -1.31
KNOP1P3-201ENST00000446933 HTATSF1O43719 755 aaKnown RBP6.86□□□□□ -1.31
KNOP1P3-201ENST00000446933 SULT6B1Q6IMI4 303 aa6.86□□□□□ -1.31
KNOP1P3-201ENST00000446933 LTV1Q96GA3 475 aaPredicted RBP6.86□□□□□ -1.31
KNOP1P3-201ENST00000446933 DCAF5Q96JK2 942 aa6.86□□□□□ -1.31
KNOP1P3-201ENST00000446933 SCN11AQ9UI33 1791 aa6.86□□□□□ -1.31
KNOP1P3-201ENST00000446933 PHKG2P15735 406 aa6.85□□□□□ -1.31
KNOP1P3-201ENST00000446933 AKAP4Q5JQC9 854 aa6.85□□□□□ -1.31
KNOP1P3-201ENST00000446933 CAMKK2Q96RR4 588 aa6.85□□□□□ -1.31
KNOP1P3-201ENST00000446933 RSPH6AQ9H0K4 717 aa6.85□□□□□ -1.31
KNOP1P3-201ENST00000446933 GOLGB1Q14789 3259 aaKnown RBP6.85□□□□□ -1.31
KNOP1P3-201ENST00000446933 VIRMAQ69YN4 1812 aaKnown RBP6.85□□□□□ -1.31
KNOP1P3-201ENST00000446933 LY75O60449 1722 aa6.84□□□□□ -1.31
KNOP1P3-201ENST00000446933 CEMIPQ8WUJ3 1361 aa6.84□□□□□ -1.31
KNOP1P3-201ENST00000446933 RREB1Q92766 1687 aa6.84□□□□□ -1.31
KNOP1P3-201ENST00000446933 CICQ96RK0 1608 aaPredicted RBP6.84□□□□□ -1.31
KNOP1P3-201ENST00000446933 BAG6P46379 1132 aa6.84□□□□□ -1.31
KNOP1P3-201ENST00000446933 GAS2L2Q8NHY3 880 aa6.84□□□□□ -1.31
KNOP1P3-201ENST00000446933 PLEKHF1Q96S99 279 aa6.84□□□□□ -1.31
KNOP1P3-201ENST00000446933 BTAF1O14981 1849 aa6.84□□□□□ -1.31
KNOP1P3-201ENST00000446933 MRC1P22897 1456 aa6.84□□□□□ -1.31
KNOP1P3-201ENST00000446933 UTRNP46939 3433 aa6.83□□□□□ -1.32
KNOP1P3-201ENST00000446933 A0A0G2JS52 829 aa6.83□□□□□ -1.32
KNOP1P3-201ENST00000446933 CD44P16070 742 aaKnown RBP6.83□□□□□ -1.32
KNOP1P3-201ENST00000446933 MYT1Q01538 1121 aa6.83□□□□□ -1.32
KNOP1P3-201ENST00000446933 SF3B2Q13435 895 aaKnown RBP6.83□□□□□ -1.32
KNOP1P3-201ENST00000446933 SLC27A3Q5K4L6 730 aa6.83□□□□□ -1.32
KNOP1P3-201ENST00000446933 AEBP1Q8IUX7 1158 aa6.83□□□□□ -1.32
KNOP1P3-201ENST00000446933 USHBP1Q8N6Y0 703 aa6.83□□□□□ -1.32
KNOP1P3-201ENST00000446933 EFCAB3Q8N7B9 438 aa6.83□□□□□ -1.32
KNOP1P3-201ENST00000446933 TOGARAM1Q9Y4F4 1720 aa6.83□□□□□ -1.32
KNOP1P3-201ENST00000446933 SIPA1L3O60292 1781 aaPredicted RBP6.82□□□□□ -1.32
KNOP1P3-201ENST00000446933 DOT1LQ8TEK3 1739 aa6.82□□□□□ -1.32
KNOP1P3-201ENST00000446933 ANP32CO43423 234 aa6.82□□□□□ -1.32
KNOP1P3-201ENST00000446933 TRIM37O94972 964 aa6.82□□□□□ -1.32
KNOP1P3-201ENST00000446933 NGEFQ8N5V2 710 aa6.82□□□□□ -1.32
KNOP1P3-201ENST00000446933 DDX54Q8TDD1 881 aaKnown RBP6.82□□□□□ -1.32
KNOP1P3-201ENST00000446933 KCNV2Q8TDN2 545 aa6.82□□□□□ -1.32
KNOP1P3-201ENST00000446933 SMARCC1Q92922 1105 aaPredicted RBP6.82□□□□□ -1.32
KNOP1P3-201ENST00000446933 BABAM1Q9NWV8 329 aa6.82□□□□□ -1.32
KNOP1P3-201ENST00000446933 QSER1Q2KHR3 1735 aa6.81□□□□□ -1.32
KNOP1P3-201ENST00000446933 GNAT3A8MTJ3 354 aa6.81□□□□□ -1.32
KNOP1P3-201ENST00000446933 KCNQ2O43526 872 aa6.81□□□□□ -1.32
KNOP1P3-201ENST00000446933 U2AF1L5P0DN76 240 aaPredicted RBP6.81□□□□□ -1.32
KNOP1P3-201ENST00000446933 PRIM1P49642 420 aaKnown RBP6.81□□□□□ -1.32
KNOP1P3-201ENST00000446933 U2AF1Q01081 240 aaKnown RBP eCLIP6.81□□□□□ -1.32
KNOP1P3-201ENST00000446933 MTHFSDQ2M296 383 aaKnown RBP6.81□□□□□ -1.32
KNOP1P3-201ENST00000446933 C1orf141Q5JVX7 400 aa6.81□□□□□ -1.32
KNOP1P3-201ENST00000446933 PNISRQ8TF01 805 aaKnown RBP6.81□□□□□ -1.32
KNOP1P3-201ENST00000446933 PHACTR3Q96KR7 559 aa6.81□□□□□ -1.32
KNOP1P3-201ENST00000446933 KDM6AO15550 1401 aaPredicted RBP6.81□□□□□ -1.32
KNOP1P3-201ENST00000446933 DLG5Q8TDM6 1919 aa6.81□□□□□ -1.32
KNOP1P3-201ENST00000446933 TAF1LQ8IZX4 1826 aa6.8□□□□□ -1.32
KNOP1P3-201ENST00000446933 PAPPAQ13219 1627 aa6.8□□□□□ -1.32
KNOP1P3-201ENST00000446933 UBR2Q8IWV8 1755 aa6.8□□□□□ -1.32
KNOP1P3-201ENST00000446933 CCER2I3L3R5 266 aa6.8□□□□□ -1.32
KNOP1P3-201ENST00000446933 U2SURPO15042 1029 aaKnown RBP6.8□□□□□ -1.32
KNOP1P3-201ENST00000446933 PPP1R37O75864 691 aa6.8□□□□□ -1.32
KNOP1P3-201ENST00000446933 APBA3O96018 575 aa6.8□□□□□ -1.32
KNOP1P3-201ENST00000446933 HMOX1P09601 288 aa6.8□□□□□ -1.32
KNOP1P3-201ENST00000446933 PRKAR2BP31323 418 aa6.8□□□□□ -1.32
KNOP1P3-201ENST00000446933 NUP188Q5SRE5 1749 aa6.8□□□□□ -1.32
KNOP1P3-201ENST00000446933 FAM182BQ5T319 152 aa6.8□□□□□ -1.32
KNOP1P3-201ENST00000446933 ZNF530Q6P9A1 599 aaPredicted RBP6.8□□□□□ -1.32
KNOP1P3-201ENST00000446933 PIGBQ92521 554 aa6.8□□□□□ -1.32
KNOP1P3-201ENST00000446933 SLC52A2Q9HAB3 445 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms