RNA–Protein interactions for RNA: ENST00000446731.2

MSRB3-203, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-203ENST00000446731 ZFP42Q96MM3 310 aa9.34□□□□□ -0.91
MSRB3-203ENST00000446731 SERTAD1Q9UHV2 236 aa9.34□□□□□ -0.91
MSRB3-203ENST00000446731 WASLO00401 505 aaPredicted RBP9.33□□□□□ -0.92
MSRB3-203ENST00000446731 UPP2O95045 317 aa9.33□□□□□ -0.92
MSRB3-203ENST00000446731 ELOAQ14241 798 aaKnown RBP9.33□□□□□ -0.92
MSRB3-203ENST00000446731 FOXD4L5Q5VV16 416 aaPredicted RBP9.33□□□□□ -0.92
MSRB3-203ENST00000446731 CNKSR1Q969H4 720 aa9.33□□□□□ -0.92
MSRB3-203ENST00000446731 CARNS1A5YM72 827 aa9.32□□□□□ -0.92
MSRB3-203ENST00000446731 LGR5O75473 907 aa9.32□□□□□ -0.92
MSRB3-203ENST00000446731 SCARF1Q14162 830 aa9.32□□□□□ -0.92
MSRB3-203ENST00000446731 ESYT1Q9BSJ8 1104 aa9.32□□□□□ -0.92
MSRB3-203ENST00000446731 SEC13P55735 322 aa9.31□□□□□ -0.92
MSRB3-203ENST00000446731 ESCO1Q5FWF5 840 aa9.31□□□□□ -0.92
MSRB3-203ENST00000446731 TMEM164Q5U3C3 297 aa9.31□□□□□ -0.92
MSRB3-203ENST00000446731 TSEN2Q8NCE0 465 aaKnown RBP9.31□□□□□ -0.92
MSRB3-203ENST00000446731 FHDC1Q9C0D6 1143 aaPredicted RBP9.31□□□□□ -0.92
MSRB3-203ENST00000446731 POLMQ9NP87 494 aaPredicted RBP9.31□□□□□ -0.92
MSRB3-203ENST00000446731 CENPCQ03188 943 aa9.3□□□□□ -0.92
MSRB3-203ENST00000446731 FAM69CQ0P6D2 419 aa9.3□□□□□ -0.92
MSRB3-203ENST00000446731 TNS4Q8IZW8 715 aa9.3□□□□□ -0.92
MSRB3-203ENST00000446731 RETREG2Q8NC44 543 aa9.3□□□□□ -0.92
MSRB3-203ENST00000446731 FAM200AQ8TCP9 573 aa9.3□□□□□ -0.92
MSRB3-203ENST00000446731 NLRP3Q96P20 1036 aa9.3□□□□□ -0.92
MSRB3-203ENST00000446731 SLC4A9Q96Q91 983 aa9.3□□□□□ -0.92
MSRB3-203ENST00000446731 GMPR2Q9P2T1 348 aaKnown RBP9.3□□□□□ -0.92
MSRB3-203ENST00000446731 USP3Q9Y6I4 520 aa9.3□□□□□ -0.92
MSRB3-203ENST00000446731 SOS2Q07890 1332 aaPredicted RBP9.3□□□□□ -0.92
MSRB3-203ENST00000446731 EPHA4P54764 986 aa9.29□□□□□ -0.92
MSRB3-203ENST00000446731 RNF217Q8TC41 542 aa9.29□□□□□ -0.92
MSRB3-203ENST00000446731 ACIN1Q9UKV3 1341 aaKnown RBP9.29□□□□□ -0.92
MSRB3-203ENST00000446731 TMEM88BA6NKF7 163 aa9.28□□□□□ -0.92
MSRB3-203ENST00000446731 TTLL8A6PVC2 850 aa9.28□□□□□ -0.92
MSRB3-203ENST00000446731 SOBPA7XYQ1 873 aa9.28□□□□□ -0.92
MSRB3-203ENST00000446731 POTECB2RU33 542 aa9.28□□□□□ -0.92
MSRB3-203ENST00000446731 RNF144AP50876 292 aaPredicted RBP9.28□□□□□ -0.92
MSRB3-203ENST00000446731 SMTNP53814 917 aa9.28□□□□□ -0.92
MSRB3-203ENST00000446731 TLR1Q15399 786 aa9.28□□□□□ -0.92
MSRB3-203ENST00000446731 SLAIN2Q9P270 581 aa9.28□□□□□ -0.92
MSRB3-203ENST00000446731 RBM19Q9Y4C8 960 aaKnown RBP9.28□□□□□ -0.92
MSRB3-203ENST00000446731 FIGNL2A6NMB9 653 aa9.27□□□□□ -0.93
MSRB3-203ENST00000446731 M0R2N6 131 aa9.27□□□□□ -0.93
MSRB3-203ENST00000446731 GAS2L2Q8NHY3 880 aa9.27□□□□□ -0.93
MSRB3-203ENST00000446731 GRIP2Q9C0E4 1043 aa9.27□□□□□ -0.93
MSRB3-203ENST00000446731 DNMT3LQ9UJW3 386 aa9.27□□□□□ -0.93
MSRB3-203ENST00000446731 A6NJY4 79 aa9.26□□□□□ -0.93
MSRB3-203ENST00000446731 BACH1O14867 736 aa9.26□□□□□ -0.93
MSRB3-203ENST00000446731 CSB-PGBD3P0DP91 1061 aa9.26□□□□□ -0.93
MSRB3-203ENST00000446731 GPC1P35052 558 aa9.26□□□□□ -0.93
MSRB3-203ENST00000446731 MTFR1Q15390 333 aa9.26□□□□□ -0.93
MSRB3-203ENST00000446731 IQSEC3Q9UPP2 1182 aaPredicted RBP9.26□□□□□ -0.93
MSRB3-203ENST00000446731 SNRPBP14678 240 aaKnown RBP9.25□□□□□ -0.93
MSRB3-203ENST00000446731 FOXK2Q01167 660 aa9.25□□□□□ -0.93
MSRB3-203ENST00000446731 TBCELQ5QJ74 424 aa9.25□□□□□ -0.93
MSRB3-203ENST00000446731 ZNF295-AS1Q8N0V1 137 aa9.25□□□□□ -0.93
MSRB3-203ENST00000446731 TRIM47Q96LD4 638 aa9.25□□□□□ -0.93
MSRB3-203ENST00000446731 TSPAN10Q9H1Z9 355 aaPredicted RBP9.25□□□□□ -0.93
MSRB3-203ENST00000446731 SCHIP1Q9P0W5 487 aaPredicted RBP9.25□□□□□ -0.93
MSRB3-203ENST00000446731 SLC27A3Q5K4L6 730 aa9.24□□□□□ -0.93
MSRB3-203ENST00000446731 ZSCAN10Q96SZ4 725 aaPredicted RBP9.24□□□□□ -0.93
MSRB3-203ENST00000446731 HINFPQ9BQA5 517 aa9.24□□□□□ -0.93
MSRB3-203ENST00000446731 C21orf2O43822 256 aa9.23□□□□□ -0.93
MSRB3-203ENST00000446731 PRICKLE2Q7Z3G6 844 aa9.23□□□□□ -0.93
MSRB3-203ENST00000446731 SLC9A9Q8IVB4 645 aa9.23□□□□□ -0.93
MSRB3-203ENST00000446731 CDK2AP1O14519 115 aa9.22□□□□□ -0.93
MSRB3-203ENST00000446731 RHOQP17081 205 aa9.22□□□□□ -0.93
MSRB3-203ENST00000446731 POU4F2Q12837 409 aa9.22□□□□□ -0.93
MSRB3-203ENST00000446731 SWI5Q1ZZU3 235 aa9.22□□□□□ -0.93
MSRB3-203ENST00000446731 PPARGC1BQ86YN6 1023 aaKnown RBP9.22□□□□□ -0.93
MSRB3-203ENST00000446731 PRIMPOLQ96LW4 560 aa9.22□□□□□ -0.93
MSRB3-203ENST00000446731 SENP2Q9HC62 589 aa9.22□□□□□ -0.93
MSRB3-203ENST00000446731 PRMT3O60678 531 aa9.21□□□□□ -0.94
MSRB3-203ENST00000446731 OCLNQ16625 522 aa9.21□□□□□ -0.94
MSRB3-203ENST00000446731 TMEM214Q6NUQ4 689 aaKnown RBP9.21□□□□□ -0.94
MSRB3-203ENST00000446731 LYSMD3Q7Z3D4 306 aa9.21□□□□□ -0.94
MSRB3-203ENST00000446731 CLP1Q92989 425 aaKnown RBP9.21□□□□□ -0.94
MSRB3-203ENST00000446731 USTQ9Y2C2 406 aa9.21□□□□□ -0.94
MSRB3-203ENST00000446731 SPATA31C2B4DYI2 1134 aa9.2□□□□□ -0.94
MSRB3-203ENST00000446731 MAN1A2O60476 641 aa9.2□□□□□ -0.94
MSRB3-203ENST00000446731 WEE1P30291 646 aa9.2□□□□□ -0.94
MSRB3-203ENST00000446731 C4orf17Q53FE4 359 aa9.2□□□□□ -0.94
MSRB3-203ENST00000446731 NBPF10Q6P3W6 841 aaKnown RBP9.2□□□□□ -0.94
MSRB3-203ENST00000446731 NBPF15Q8N660 670 aa9.2□□□□□ -0.94
MSRB3-203ENST00000446731 ZDHHC1Q8WTX9 485 aa9.2□□□□□ -0.94
MSRB3-203ENST00000446731 SCG3Q8WXD2 468 aaKnown RBP9.2□□□□□ -0.94
MSRB3-203ENST00000446731 KIFC2Q96AC6 838 aa9.2□□□□□ -0.94
MSRB3-203ENST00000446731 C11orf95C9JLR9 678 aaPredicted RBP9.19□□□□□ -0.94
MSRB3-203ENST00000446731 PHKA2P46019 1235 aa9.19□□□□□ -0.94
MSRB3-203ENST00000446731 SH3PXD2AQ5TCZ1 1133 aa9.19□□□□□ -0.94
MSRB3-203ENST00000446731 RHBDD1Q8TEB9 315 aa9.19□□□□□ -0.94
MSRB3-203ENST00000446731 PARP3Q9Y6F1 533 aa9.19□□□□□ -0.94
MSRB3-203ENST00000446731 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.18□□□□□ -0.94
MSRB3-203ENST00000446731 GNASQ5JWF2 1037 aa9.18□□□□□ -0.94
MSRB3-203ENST00000446731 ATAD2Q6PL18 1390 aa9.18□□□□□ -0.94
MSRB3-203ENST00000446731 SENP3-EIF4A1A0A087X0R7 540 aa9.17□□□□□ -0.94
MSRB3-203ENST00000446731 IGFBP4P22692 258 aa9.17□□□□□ -0.94
MSRB3-203ENST00000446731 PLA2G4AP47712 749 aa9.17□□□□□ -0.94
MSRB3-203ENST00000446731 TAS1R3Q7RTX0 852 aa9.17□□□□□ -0.94
MSRB3-203ENST00000446731 CABP1Q9NZU7 370 aa9.17□□□□□ -0.94
MSRB3-203ENST00000446731 PPP1R12BO60237 982 aaPredicted RBP9.16□□□□□ -0.94
MSRB3-203ENST00000446731 ATP2B4P23634 1241 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms