RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ESYT1Q9BSJ8 1104 aa8.31□□□□□ -1.08
HMGB1P48-201ENST00000446155 RAB6BQ9NRW1 208 aa8.31□□□□□ -1.08
HMGB1P48-201ENST00000446155 ACIN1Q9UKV3 1341 aaKnown RBP8.3□□□□□ -1.08
HMGB1P48-201ENST00000446155 ESCO1Q5FWF5 840 aa8.3□□□□□ -1.08
HMGB1P48-201ENST00000446155 FHDC1Q9C0D6 1143 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P48-201ENST00000446155 ZNF395Q9H8N7 513 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P48-201ENST00000446155 DACH1Q9UI36 760 aa8.3□□□□□ -1.08
HMGB1P48-201ENST00000446155 USTQ9Y2C2 406 aa8.3□□□□□ -1.08
HMGB1P48-201ENST00000446155 MTFR1Q15390 333 aa8.29□□□□□ -1.08
HMGB1P48-201ENST00000446155 FAM200AQ8TCP9 573 aa8.29□□□□□ -1.08
HMGB1P48-201ENST00000446155 CNKSR1Q969H4 720 aa8.29□□□□□ -1.08
HMGB1P48-201ENST00000446155 SLAIN2Q9P270 581 aa8.29□□□□□ -1.08
HMGB1P48-201ENST00000446155 FOXD4L5Q5VV16 416 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P48-201ENST00000446155 ZNF295-AS1Q8N0V1 137 aa8.28□□□□□ -1.08
HMGB1P48-201ENST00000446155 INSM2Q96T92 566 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P48-201ENST00000446155 ATP13A2Q9NQ11 1180 aa8.28□□□□□ -1.08
HMGB1P48-201ENST00000446155 CSB-PGBD3P0DP91 1061 aa8.27□□□□□ -1.09
HMGB1P48-201ENST00000446155 GPC1P35052 558 aa8.27□□□□□ -1.09
HMGB1P48-201ENST00000446155 CTSOP43234 321 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P48-201ENST00000446155 RNF144AP50876 292 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P48-201ENST00000446155 FOXK2Q01167 660 aa8.27□□□□□ -1.09
HMGB1P48-201ENST00000446155 SWI5Q1ZZU3 235 aa8.27□□□□□ -1.09
HMGB1P48-201ENST00000446155 TSEN2Q8NCE0 465 aaKnown RBP8.27□□□□□ -1.09
HMGB1P48-201ENST00000446155 IQSEC3Q9UPP2 1182 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P48-201ENST00000446155 MEN1O00255 615 aa8.26□□□□□ -1.09
HMGB1P48-201ENST00000446155 BACH1O14867 736 aa8.26□□□□□ -1.09
HMGB1P48-201ENST00000446155 UPP2O95045 317 aa8.26□□□□□ -1.09
HMGB1P48-201ENST00000446155 BMP2P12643 396 aa8.26□□□□□ -1.09
HMGB1P48-201ENST00000446155 SMTNP53814 917 aa8.26□□□□□ -1.09
HMGB1P48-201ENST00000446155 CENPCQ03188 943 aa8.26□□□□□ -1.09
HMGB1P48-201ENST00000446155 C6orf118Q5T5N4 469 aa8.26□□□□□ -1.09
HMGB1P48-201ENST00000446155 CLP1Q92989 425 aaKnown RBP8.26□□□□□ -1.09
HMGB1P48-201ENST00000446155 ZFP42Q96MM3 310 aa8.26□□□□□ -1.09
HMGB1P48-201ENST00000446155 PURBQ96QR8 312 aaKnown RBP8.26□□□□□ -1.09
HMGB1P48-201ENST00000446155 GRIP2Q9C0E4 1043 aa8.26□□□□□ -1.09
HMGB1P48-201ENST00000446155 SERTAD1Q9UHV2 236 aa8.26□□□□□ -1.09
HMGB1P48-201ENST00000446155 SOS2Q07890 1332 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P48-201ENST00000446155 CARNS1A5YM72 827 aa8.25□□□□□ -1.09
HMGB1P48-201ENST00000446155 A6NJY4 79 aa8.25□□□□□ -1.09
HMGB1P48-201ENST00000446155 SCARF1Q14162 830 aa8.25□□□□□ -1.09
HMGB1P48-201ENST00000446155 TNS4Q8IZW8 715 aa8.25□□□□□ -1.09
HMGB1P48-201ENST00000446155 RNF217Q8TC41 542 aa8.25□□□□□ -1.09
HMGB1P48-201ENST00000446155 SCHIP1Q9P0W5 487 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P48-201ENST00000446155 RBM19Q9Y4C8 960 aaKnown RBP8.25□□□□□ -1.09
HMGB1P48-201ENST00000446155 USP3Q9Y6I4 520 aa8.25□□□□□ -1.09
HMGB1P48-201ENST00000446155 TLR1Q15399 786 aa8.24□□□□□ -1.09
HMGB1P48-201ENST00000446155 OCLNQ16625 522 aa8.24□□□□□ -1.09
HMGB1P48-201ENST00000446155 CDK2AP1O14519 115 aa8.23□□□□□ -1.09
HMGB1P48-201ENST00000446155 C21orf2O43822 256 aa8.23□□□□□ -1.09
HMGB1P48-201ENST00000446155 WEE1P30291 646 aa8.23□□□□□ -1.09
HMGB1P48-201ENST00000446155 POTEAQ6S8J7 498 aa8.23□□□□□ -1.09
HMGB1P48-201ENST00000446155 Q6ZNB5 142 aa8.23□□□□□ -1.09
HMGB1P48-201ENST00000446155 PPARGC1BQ86YN6 1023 aaKnown RBP8.23□□□□□ -1.09
HMGB1P48-201ENST00000446155 NLRP3Q96P20 1036 aa8.23□□□□□ -1.09
HMGB1P48-201ENST00000446155 TRAIPQ9BWF2 469 aa8.23□□□□□ -1.09
HMGB1P48-201ENST00000446155 SPATA31C2B4DYI2 1134 aa8.22□□□□□ -1.09
HMGB1P48-201ENST00000446155 TSPAN10Q9H1Z9 355 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P48-201ENST00000446155 POLMQ9NP87 494 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P48-201ENST00000446155 TTLL8A6PVC2 850 aa8.21□□□□□ -1.1
HMGB1P48-201ENST00000446155 PHLDB3Q6NSJ2 640 aa8.21□□□□□ -1.1
HMGB1P48-201ENST00000446155 SLC9A9Q8IVB4 645 aa8.21□□□□□ -1.1
HMGB1P48-201ENST00000446155 ZSCAN10Q96SZ4 725 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P48-201ENST00000446155 DNMT3LQ9UJW3 386 aa8.21□□□□□ -1.1
HMGB1P48-201ENST00000446155 LGR5O75473 907 aa8.2□□□□□ -1.1
HMGB1P48-201ENST00000446155 IGFBP4P22692 258 aa8.2□□□□□ -1.1
HMGB1P48-201ENST00000446155 PDE4CQ08493 712 aa8.2□□□□□ -1.1
HMGB1P48-201ENST00000446155 TRIM47Q96LD4 638 aa8.2□□□□□ -1.1
HMGB1P48-201ENST00000446155 STAG2Q8N3U4 1231 aa8.19□□□□□ -1.1
HMGB1P48-201ENST00000446155 GAS2L2Q8NHY3 880 aa8.19□□□□□ -1.1
HMGB1P48-201ENST00000446155 RHBDD1Q8TEB9 315 aa8.19□□□□□ -1.1
HMGB1P48-201ENST00000446155 ZDHHC1Q8WTX9 485 aa8.19□□□□□ -1.1
HMGB1P48-201ENST00000446155 HINFPQ9BQA5 517 aa8.19□□□□□ -1.1
HMGB1P48-201ENST00000446155 CXXC1Q9P0U4 656 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P48-201ENST00000446155 GMPR2Q9P2T1 348 aaKnown RBP8.19□□□□□ -1.1
HMGB1P48-201ENST00000446155 ATAD2Q6PL18 1390 aa8.19□□□□□ -1.1
HMGB1P48-201ENST00000446155 SSFA2P28290 1259 aa8.18□□□□□ -1.1
HMGB1P48-201ENST00000446155 SLC27A3Q5K4L6 730 aa8.18□□□□□ -1.1
HMGB1P48-201ENST00000446155 NBPF15Q8N660 670 aa8.18□□□□□ -1.1
HMGB1P48-201ENST00000446155 C1orf216Q8TAB5 229 aa8.18□□□□□ -1.1
HMGB1P48-201ENST00000446155 PRIMPOLQ96LW4 560 aa8.18□□□□□ -1.1
HMGB1P48-201ENST00000446155 SENP2Q9HC62 589 aa8.18□□□□□ -1.1
HMGB1P48-201ENST00000446155 FIGNL2A6NMB9 653 aa8.17□□□□□ -1.1
HMGB1P48-201ENST00000446155 EML1O00423 815 aa8.17□□□□□ -1.1
HMGB1P48-201ENST00000446155 PRMT3O60678 531 aa8.17□□□□□ -1.1
HMGB1P48-201ENST00000446155 ATP2B4P23634 1241 aa8.17□□□□□ -1.1
HMGB1P48-201ENST00000446155 HIRAP54198 1017 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P48-201ENST00000446155 TEAD4Q15561 434 aa8.17□□□□□ -1.1
HMGB1P48-201ENST00000446155 C4orf17Q53FE4 359 aa8.17□□□□□ -1.1
HMGB1P48-201ENST00000446155 WDR44Q5JSH3 913 aa8.17□□□□□ -1.1
HMGB1P48-201ENST00000446155 TBCELQ5QJ74 424 aa8.17□□□□□ -1.1
HMGB1P48-201ENST00000446155 LYSMD3Q7Z3D4 306 aa8.17□□□□□ -1.1
HMGB1P48-201ENST00000446155 SCG3Q8WXD2 468 aaKnown RBP8.17□□□□□ -1.1
HMGB1P48-201ENST00000446155 KIFC2Q96AC6 838 aa8.17□□□□□ -1.1
HMGB1P48-201ENST00000446155 FOXO3O43524 673 aa8.16□□□□□ -1.1
HMGB1P48-201ENST00000446155 PSMA6P60900 246 aaKnown RBP8.16□□□□□ -1.1
HMGB1P48-201ENST00000446155 FKBP5Q13451 457 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P48-201ENST00000446155 NBPF10Q6P3W6 841 aaKnown RBP8.16□□□□□ -1.1
HMGB1P48-201ENST00000446155 TAS1R3Q7RTX0 852 aa8.16□□□□□ -1.1
HMGB1P48-201ENST00000446155 C2orf49Q9BVC5 232 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P48-201ENST00000446155 SOBPA7XYQ1 873 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms