RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 MSL1Q68DK7 614 aa14□□□□□ -0.17
UBE2D4-206ENST00000446008 C5P01031 1676 aa14□□□□□ -0.17
UBE2D4-206ENST00000446008 AMPHP49418 695 aa13.99□□□□□ -0.17
UBE2D4-206ENST00000446008 COG3Q96JB2 828 aa13.99□□□□□ -0.17
UBE2D4-206ENST00000446008 CARD11Q9BXL7 1154 aa13.98□□□□□ -0.17
UBE2D4-206ENST00000446008 NEUROD1Q13562 356 aa13.97□□□□□ -0.17
UBE2D4-206ENST00000446008 NBPF6Q5VWK0 638 aa13.97□□□□□ -0.17
UBE2D4-206ENST00000446008 NBPF4Q96M43 638 aa13.97□□□□□ -0.17
UBE2D4-206ENST00000446008 RTL1A6NKG5 1358 aa13.96□□□□□ -0.17
UBE2D4-206ENST00000446008 FBLN1P23142 703 aa13.96□□□□□ -0.17
UBE2D4-206ENST00000446008 KIF12Q96FN5 646 aa13.96□□□□□ -0.17
UBE2D4-206ENST00000446008 UBR3Q6ZT12 1888 aa13.95□□□□□ -0.18
UBE2D4-206ENST00000446008 KIF3CO14782 793 aa13.95□□□□□ -0.18
UBE2D4-206ENST00000446008 ZNF526Q8TF50 670 aaPredicted RBP13.95□□□□□ -0.18
UBE2D4-206ENST00000446008 RAPGEF4Q8WZA2 1011 aa13.95□□□□□ -0.18
UBE2D4-206ENST00000446008 PALLDQ8WX93 1383 aa13.95□□□□□ -0.18
UBE2D4-206ENST00000446008 IGSF1Q8N6C5 1336 aa13.94□□□□□ -0.18
UBE2D4-206ENST00000446008 C4BP0C0L5 1744 aa13.94□□□□□ -0.18
UBE2D4-206ENST00000446008 TATP17735 454 aaPredicted RBP13.94□□□□□ -0.18
UBE2D4-206ENST00000446008 ITGB4P16144 1822 aa13.94□□□□□ -0.18
UBE2D4-206ENST00000446008 GALR2O43603 387 aaPredicted RBP13.93□□□□□ -0.18
UBE2D4-206ENST00000446008 PYGBP11216 843 aa13.93□□□□□ -0.18
UBE2D4-206ENST00000446008 SMARCC1Q92922 1105 aaPredicted RBP13.93□□□□□ -0.18
UBE2D4-206ENST00000446008 TOGARAM1Q9Y4F4 1720 aa13.93□□□□□ -0.18
UBE2D4-206ENST00000446008 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
UBE2D4-206ENST00000446008 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
UBE2D4-206ENST00000446008 NSD3Q9BZ95 1437 aa13.92□□□□□ -0.18
UBE2D4-206ENST00000446008 MAP3K13O43283 966 aa13.92□□□□□ -0.18
UBE2D4-206ENST00000446008 MPRIPQ6WCQ1 1025 aa13.92□□□□□ -0.18
UBE2D4-206ENST00000446008 AMIGO3Q86WK7 504 aa13.92□□□□□ -0.18
UBE2D4-206ENST00000446008 USHBP1Q8N6Y0 703 aa13.92□□□□□ -0.18
UBE2D4-206ENST00000446008 AK7Q96M32 723 aa13.92□□□□□ -0.18
UBE2D4-206ENST00000446008 CYP27B1O15528 508 aa13.91□□□□□ -0.18
UBE2D4-206ENST00000446008 SLC24A1O60721 1099 aa13.91□□□□□ -0.18
UBE2D4-206ENST00000446008 SSFA2P28290 1259 aa13.91□□□□□ -0.18
UBE2D4-206ENST00000446008 RRS1Q15050 365 aaKnown RBP13.91□□□□□ -0.18
UBE2D4-206ENST00000446008 MS4A3Q96HJ5 214 aa13.91□□□□□ -0.18
UBE2D4-206ENST00000446008 SMG6Q86US8 1419 aaKnown RBP13.9□□□□□ -0.18
UBE2D4-206ENST00000446008 CICQ96RK0 1608 aaPredicted RBP13.9□□□□□ -0.18
UBE2D4-206ENST00000446008 MAP2P11137 1827 aaKnown RBP13.9□□□□□ -0.18
UBE2D4-206ENST00000446008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.9□□□□□ -0.18
UBE2D4-206ENST00000446008 APLP1P51693 650 aa13.9□□□□□ -0.18
UBE2D4-206ENST00000446008 TESK2Q96S53 571 aa13.9□□□□□ -0.18
UBE2D4-206ENST00000446008 INSRP06213 1382 aa13.89□□□□□ -0.19
UBE2D4-206ENST00000446008 FYB1O15117 783 aa13.89□□□□□ -0.19
UBE2D4-206ENST00000446008 DNAJC5GQ8N7S2 189 aa13.89□□□□□ -0.19
UBE2D4-206ENST00000446008 KIF24Q5T7B8 1368 aa13.88□□□□□ -0.19
UBE2D4-206ENST00000446008 TOMM70O94826 608 aa13.88□□□□□ -0.19
UBE2D4-206ENST00000446008 NKX1-1Q15270 411 aaPredicted RBP13.88□□□□□ -0.19
UBE2D4-206ENST00000446008 PIGBQ92521 554 aa13.88□□□□□ -0.19
UBE2D4-206ENST00000446008 PCDHB13Q9Y5F0 798 aa13.88□□□□□ -0.19
UBE2D4-206ENST00000446008 KIF13BQ9NQT8 1826 aa13.87□□□□□ -0.19
UBE2D4-206ENST00000446008 PKD1L3Q7Z443 1732 aa13.87□□□□□ -0.19
UBE2D4-206ENST00000446008 PHF14O94880 888 aa13.87□□□□□ -0.19
UBE2D4-206ENST00000446008 HSP90AB2PQ58FF8 381 aa13.87□□□□□ -0.19
UBE2D4-206ENST00000446008 SMIM5Q71RC9 77 aa13.87□□□□□ -0.19
UBE2D4-206ENST00000446008 GGNBP2Q9H3C7 697 aa13.87□□□□□ -0.19
UBE2D4-206ENST00000446008 WWC3Q9ULE0 1092 aa13.87□□□□□ -0.19
UBE2D4-206ENST00000446008 ST20-MTHFSA0A0A6YYL1 179 aa13.86□□□□□ -0.19
UBE2D4-206ENST00000446008 LOC102724428A0A0B4J2F2 783 aa13.86□□□□□ -0.19
UBE2D4-206ENST00000446008 SIK1P57059 783 aa13.86□□□□□ -0.19
UBE2D4-206ENST00000446008 TGFB2P61812 414 aa13.86□□□□□ -0.19
UBE2D4-206ENST00000446008 FLT4P35916 1363 aa13.85□□□□□ -0.19
UBE2D4-206ENST00000446008 KIAA1551Q9HCM1 1747 aa13.85□□□□□ -0.19
UBE2D4-206ENST00000446008 LINC00116Q8NCU8 138 aa13.85□□□□□ -0.19
UBE2D4-206ENST00000446008 NCAPD2Q15021 1401 aa13.84□□□□□ -0.19
UBE2D4-206ENST00000446008 CHRM1P11229 460 aaPredicted RBP13.84□□□□□ -0.19
UBE2D4-206ENST00000446008 PXDNLA1KZ92 1463 aa13.84□□□□□ -0.19
UBE2D4-206ENST00000446008 N4BP2Q86UW6 1770 aaPredicted RBP13.83□□□□□ -0.19
UBE2D4-206ENST00000446008 MMP10P09238 476 aa13.82□□□□□ -0.2
UBE2D4-206ENST00000446008 ITPK1Q13572 414 aa13.82□□□□□ -0.2
UBE2D4-206ENST00000446008 DCBLD2Q96PD2 775 aa13.82□□□□□ -0.2
UBE2D4-206ENST00000446008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.82□□□□□ -0.2
UBE2D4-206ENST00000446008 SPG7Q9UQ90 795 aa13.82□□□□□ -0.2
UBE2D4-206ENST00000446008 KIF20BQ96Q89 1820 aa13.81□□□□□ -0.2
UBE2D4-206ENST00000446008 BRCA1P38398 1863 aaKnown RBP13.81□□□□□ -0.2
UBE2D4-206ENST00000446008 GNPATO15228 680 aa13.81□□□□□ -0.2
UBE2D4-206ENST00000446008 ATP6V1AP38606 617 aa13.81□□□□□ -0.2
UBE2D4-206ENST00000446008 NLGN1Q8N2Q7 840 aa13.81□□□□□ -0.2
UBE2D4-206ENST00000446008 RBM46Q8TBY0 533 aaKnown RBP13.81□□□□□ -0.2
UBE2D4-206ENST00000446008 TMOD3Q9NYL9 352 aa13.81□□□□□ -0.2
UBE2D4-206ENST00000446008 ASAP1Q9ULH1 1129 aa13.81□□□□□ -0.2
UBE2D4-206ENST00000446008 BCS1LQ9Y276 419 aa13.81□□□□□ -0.2
UBE2D4-206ENST00000446008 WDR90Q96KV7 1748 aa13.81□□□□□ -0.2
UBE2D4-206ENST00000446008 A0A0G2JLW4 131 aa13.8□□□□□ -0.2
UBE2D4-206ENST00000446008 IFNL1Q8IU54 200 aa13.8□□□□□ -0.2
UBE2D4-206ENST00000446008 NMRK2Q9NPI5 230 aa13.8□□□□□ -0.2
UBE2D4-206ENST00000446008 TONSLQ96HA7 1378 aa13.8□□□□□ -0.2
UBE2D4-206ENST00000446008 C10orf71Q711Q0 1435 aa13.8□□□□□ -0.2
UBE2D4-206ENST00000446008 ARFGEF1Q9Y6D6 1849 aa13.79□□□□□ -0.2
UBE2D4-206ENST00000446008 TMF1P82094 1093 aa13.79□□□□□ -0.2
UBE2D4-206ENST00000446008 TRAPPC3LQ5T215 181 aa13.79□□□□□ -0.2
UBE2D4-206ENST00000446008 ARHGAP27Q6ZUM4 889 aa13.79□□□□□ -0.2
UBE2D4-206ENST00000446008 JMYQ8N9B5 988 aa13.79□□□□□ -0.2
UBE2D4-206ENST00000446008 ATG3Q9NT62 314 aa13.79□□□□□ -0.2
UBE2D4-206ENST00000446008 PCNTO95613 3336 aa13.79□□□□□ -0.2
UBE2D4-206ENST00000446008 ZNF831Q5JPB2 1677 aa13.79□□□□□ -0.2
UBE2D4-206ENST00000446008 RC3H1Q5TC82 1133 aaKnown RBP13.78□□□□□ -0.2
UBE2D4-206ENST00000446008 IFNL2Q8IZJ0 200 aa13.78□□□□□ -0.2
UBE2D4-206ENST00000446008 KLRG1Q96E93 195 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms