RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 WNK3Q9BYP7 1800 aa12.3□□□□□ -0.44
NPHP1-207ENST00000445609 GLI3P10071 1580 aa12.3□□□□□ -0.44
NPHP1-207ENST00000445609 ELL2O00472 640 aaPredicted RBP12.29□□□□□ -0.44
NPHP1-207ENST00000445609 TWISTNBQ3B726 338 aaPredicted RBP12.29□□□□□ -0.44
NPHP1-207ENST00000445609 TSPYL6Q8N831 410 aa12.29□□□□□ -0.44
NPHP1-207ENST00000445609 SHANK3Q9BYB0 1731 aa12.29□□□□□ -0.44
NPHP1-207ENST00000445609 VAMP4O75379 141 aa12.29□□□□□ -0.44
NPHP1-207ENST00000445609 SEPT12Q8IYM1 358 aa12.29□□□□□ -0.44
NPHP1-207ENST00000445609 ZNF428Q96B54 188 aa12.29□□□□□ -0.44
NPHP1-207ENST00000445609 MRC1P22897 1456 aa12.28□□□□□ -0.44
NPHP1-207ENST00000445609 RARSP54136 660 aaKnown RBP12.28□□□□□ -0.44
NPHP1-207ENST00000445609 RBM6P78332 1123 aaKnown RBP12.28□□□□□ -0.44
NPHP1-207ENST00000445609 KCNQ3O43525 872 aa12.28□□□□□ -0.44
NPHP1-207ENST00000445609 EIF4A1P60842 406 aaKnown RBP12.28□□□□□ -0.44
NPHP1-207ENST00000445609 KRT24Q2M2I5 525 aa12.28□□□□□ -0.44
NPHP1-207ENST00000445609 ZNF790Q6PG37 636 aa12.28□□□□□ -0.44
NPHP1-207ENST00000445609 TMOD3Q9NYL9 352 aa12.28□□□□□ -0.44
NPHP1-207ENST00000445609 SCN11AQ9UI33 1791 aa12.27□□□□□ -0.44
NPHP1-207ENST00000445609 SLC39A6Q13433 755 aa12.27□□□□□ -0.45
NPHP1-207ENST00000445609 THSD7AQ9UPZ6 1657 aa12.26□□□□□ -0.45
NPHP1-207ENST00000445609 TTC5Q8N0Z6 440 aa12.26□□□□□ -0.45
NPHP1-207ENST00000445609 SOS1Q07889 1333 aaPredicted RBP12.26□□□□□ -0.45
NPHP1-207ENST00000445609 BCAR3O75815 825 aa12.26□□□□□ -0.45
NPHP1-207ENST00000445609 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
NPHP1-207ENST00000445609 PIGBQ92521 554 aa12.26□□□□□ -0.45
NPHP1-207ENST00000445609 RNF123Q5XPI4 1314 aa12.25□□□□□ -0.45
NPHP1-207ENST00000445609 RXRBP28702 533 aa12.25□□□□□ -0.45
NPHP1-207ENST00000445609 ALDH1L2Q3SY69 923 aa12.25□□□□□ -0.45
NPHP1-207ENST00000445609 SYTL4Q96C24 671 aaPredicted RBP12.25□□□□□ -0.45
NPHP1-207ENST00000445609 RGS17Q9UGC6 210 aaPredicted RBP12.25□□□□□ -0.45
NPHP1-207ENST00000445609 SSH1Q8WYL5 1049 aa12.25□□□□□ -0.45
NPHP1-207ENST00000445609 HOXB7P09629 217 aa12.24□□□□□ -0.45
NPHP1-207ENST00000445609 RRP1P56182 461 aaKnown RBP12.24□□□□□ -0.45
NPHP1-207ENST00000445609 BCL2L13Q9BXK5 485 aa12.24□□□□□ -0.45
NPHP1-207ENST00000445609 SMC4Q9NTJ3 1288 aa12.24□□□□□ -0.45
NPHP1-207ENST00000445609 SIPA1L3O60292 1781 aaPredicted RBP12.24□□□□□ -0.45
NPHP1-207ENST00000445609 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.24□□□□□ -0.45
NPHP1-207ENST00000445609 ACSBG1Q96GR2 724 aa12.24□□□□□ -0.45
NPHP1-207ENST00000445609 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
NPHP1-207ENST00000445609 BCL9O00512 1426 aa12.23□□□□□ -0.45
NPHP1-207ENST00000445609 HEG1Q9ULI3 1381 aa12.23□□□□□ -0.45
NPHP1-207ENST00000445609 GIGYF1O75420 1035 aaPredicted RBP12.23□□□□□ -0.45
NPHP1-207ENST00000445609 ILDR1Q86SU0 546 aaPredicted RBP12.23□□□□□ -0.45
NPHP1-207ENST00000445609 FMNL2Q96PY5 1086 aa12.23□□□□□ -0.45
NPHP1-207ENST00000445609 CHMP4AQ9BY43 222 aa12.23□□□□□ -0.45
NPHP1-207ENST00000445609 NEFLP07196 543 aa12.22□□□□□ -0.45
NPHP1-207ENST00000445609 KDM3BQ7LBC6 1761 aa12.22□□□□□ -0.45
NPHP1-207ENST00000445609 ASAP1Q9ULH1 1129 aa12.22□□□□□ -0.45
NPHP1-207ENST00000445609 TOGARAM1Q9Y4F4 1720 aa12.22□□□□□ -0.45
NPHP1-207ENST00000445609 VIRMAQ69YN4 1812 aaKnown RBP12.22□□□□□ -0.45
NPHP1-207ENST00000445609 PLIN1O60240 522 aa12.21□□□□□ -0.45
NPHP1-207ENST00000445609 BRPF1P55201 1214 aaPredicted RBP12.21□□□□□ -0.45
NPHP1-207ENST00000445609 CCDC30Q5VVM6 783 aa12.21□□□□□ -0.45
NPHP1-207ENST00000445609 POTEAQ6S8J7 498 aa12.21□□□□□ -0.45
NPHP1-207ENST00000445609 KRT27Q7Z3Y8 459 aa12.21□□□□□ -0.45
NPHP1-207ENST00000445609 ATG3Q9NT62 314 aa12.21□□□□□ -0.45
NPHP1-207ENST00000445609 TCERG1O14776 1098 aaKnown RBP12.21□□□□□ -0.45
NPHP1-207ENST00000445609 SNRPA1P09661 255 aaKnown RBP12.21□□□□□ -0.45
NPHP1-207ENST00000445609 FAM182BQ5T319 152 aa12.21□□□□□ -0.45
NPHP1-207ENST00000445609 KCNQ2O43526 872 aa12.2□□□□□ -0.46
NPHP1-207ENST00000445609 PTCD1O75127 700 aaKnown RBP12.2□□□□□ -0.46
NPHP1-207ENST00000445609 HDGFL1Q5TGJ6 251 aa12.2□□□□□ -0.46
NPHP1-207ENST00000445609 MRPL50Q8N5N7 158 aaKnown RBP12.2□□□□□ -0.46
NPHP1-207ENST00000445609 FRAT1Q92837 279 aaPredicted RBP12.2□□□□□ -0.46
NPHP1-207ENST00000445609 EIF2S2P20042 333 aaKnown RBP12.2□□□□□ -0.46
NPHP1-207ENST00000445609 CANXP27824 592 aaKnown RBP12.2□□□□□ -0.46
NPHP1-207ENST00000445609 STK31Q9BXU1 1019 aa12.2□□□□□ -0.46
NPHP1-207ENST00000445609 KIF16BQ96L93 1317 aa12.2□□□□□ -0.46
NPHP1-207ENST00000445609 NECTIN2Q92692 538 aa12.19□□□□□ -0.46
NPHP1-207ENST00000445609 PRAMEF22A3QJZ6 481 aa12.19□□□□□ -0.46
NPHP1-207ENST00000445609 IPO8O15397 1037 aaKnown RBP12.19□□□□□ -0.46
NPHP1-207ENST00000445609 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
NPHP1-207ENST00000445609 FAM196AQ6ZSG2 479 aa12.19□□□□□ -0.46
NPHP1-207ENST00000445609 NOB1Q9ULX3 412 aaKnown RBP12.19□□□□□ -0.46
NPHP1-207ENST00000445609 IRX6P78412 446 aaPredicted RBP12.18□□□□□ -0.46
NPHP1-207ENST00000445609 ZKSCAN2Q63HK3 967 aa12.18□□□□□ -0.46
NPHP1-207ENST00000445609 VSIG10Q8N0Z9 540 aa12.18□□□□□ -0.46
NPHP1-207ENST00000445609 DOT1LQ8TEK3 1739 aa12.18□□□□□ -0.46
NPHP1-207ENST00000445609 FKBP8Q14318 412 aa12.17□□□□□ -0.46
NPHP1-207ENST00000445609 SMARCC1Q92922 1105 aaPredicted RBP12.17□□□□□ -0.46
NPHP1-207ENST00000445609 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
NPHP1-207ENST00000445609 USP16Q9Y5T5 823 aa12.17□□□□□ -0.46
NPHP1-207ENST00000445609 KCPQ6ZWJ8 1503 aa12.17□□□□□ -0.46
NPHP1-207ENST00000445609 ARHGAP45Q92619 1136 aa12.17□□□□□ -0.46
NPHP1-207ENST00000445609 TEX13AQ9BXU3 409 aaPredicted RBP12.17□□□□□ -0.46
NPHP1-207ENST00000445609 DBF4Q9UBU7 674 aaPredicted RBP12.17□□□□□ -0.46
NPHP1-207ENST00000445609 GTF3C3Q9Y5Q9 886 aa12.17□□□□□ -0.46
NPHP1-207ENST00000445609 PDE3AQ14432 1141 aa12.16□□□□□ -0.46
NPHP1-207ENST00000445609 ATF7IPQ6VMQ6 1270 aa12.16□□□□□ -0.46
NPHP1-207ENST00000445609 ITGB4P16144 1822 aa12.16□□□□□ -0.46
NPHP1-207ENST00000445609 PAPPAQ13219 1627 aa12.16□□□□□ -0.46
NPHP1-207ENST00000445609 MS4A1P11836 297 aa12.16□□□□□ -0.46
NPHP1-207ENST00000445609 C20orf194Q5TEA3 1177 aa12.16□□□□□ -0.46
NPHP1-207ENST00000445609 PTF1AQ7RTS3 328 aa12.16□□□□□ -0.46
NPHP1-207ENST00000445609 CHPF2Q9P2E5 772 aa12.16□□□□□ -0.46
NPHP1-207ENST00000445609 BCL11BQ9C0K0 894 aaPredicted RBP12.15□□□□□ -0.46
NPHP1-207ENST00000445609 RGS12O14924 1447 aa12.15□□□□□ -0.46
NPHP1-207ENST00000445609 TRIM27P14373 513 aa12.15□□□□□ -0.46
NPHP1-207ENST00000445609 PALLDQ8WX93 1383 aa12.15□□□□□ -0.47
NPHP1-207ENST00000445609 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms