RNA–Protein interactions for RNA: ENST00000445180.2

LINC01648-201, Transcript of long intergenic non-protein coding RNA 1648, humanhuman

TSL 1 (best) BASIC

Gene LINC01648, Length 1,519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01648-201ENST00000445180 SLC4A2P04920 1241 aa18.71■□□□□ 0.59
LINC01648-201ENST00000445180 HOXB7P09629 217 aa18.71■□□□□ 0.59
LINC01648-201ENST00000445180 CCDC30Q5VVM6 783 aa18.71■□□□□ 0.59
LINC01648-201ENST00000445180 CENPQQ7L2Z9 268 aaPredicted RBP18.71■□□□□ 0.59
LINC01648-201ENST00000445180 CHMP4AQ9BY43 222 aa18.71■□□□□ 0.59
LINC01648-201ENST00000445180 ITPRIPQ8IWB1 547 aa18.7■□□□□ 0.58
LINC01648-201ENST00000445180 COL14A1Q05707 1796 aaKnown RBP18.7■□□□□ 0.58
LINC01648-201ENST00000445180 ABCC4O15439 1325 aa18.7■□□□□ 0.58
LINC01648-201ENST00000445180 PTPRCP08575 1304 aa18.7■□□□□ 0.58
LINC01648-201ENST00000445180 KCNQ3O43525 872 aa18.69■□□□□ 0.58
LINC01648-201ENST00000445180 SLC52A2Q9HAB3 445 aa18.69■□□□□ 0.58
LINC01648-201ENST00000445180 KDM6AO15550 1401 aaPredicted RBP18.69■□□□□ 0.58
LINC01648-201ENST00000445180 PKD1L3Q7Z443 1732 aa18.69■□□□□ 0.58
LINC01648-201ENST00000445180 STK31Q9BXU1 1019 aa18.69■□□□□ 0.58
LINC01648-201ENST00000445180 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
LINC01648-201ENST00000445180 CERKQ8TCT0 537 aa18.68■□□□□ 0.58
LINC01648-201ENST00000445180 CHMP4BQ9H444 224 aaKnown RBP18.68■□□□□ 0.58
LINC01648-201ENST00000445180 PCDH11XQ9BZA7 1347 aa18.67■□□□□ 0.58
LINC01648-201ENST00000445180 PCDH11YQ9BZA8 1340 aa18.67■□□□□ 0.58
LINC01648-201ENST00000445180 ZBTB40Q9NUA8 1239 aa18.67■□□□□ 0.58
LINC01648-201ENST00000445180 PCDHB15Q9Y5E8 787 aa18.67■□□□□ 0.58
LINC01648-201ENST00000445180 HEG1Q9ULI3 1381 aa18.67■□□□□ 0.58
LINC01648-201ENST00000445180 NFATC2IPQ8NCF5 419 aa18.66■□□□□ 0.58
LINC01648-201ENST00000445180 KDM3BQ7LBC6 1761 aa18.66■□□□□ 0.58
LINC01648-201ENST00000445180 ZBTB7BO15156 539 aaPredicted RBP18.65■□□□□ 0.58
LINC01648-201ENST00000445180 IGHDP01880 384 aa18.65■□□□□ 0.58
LINC01648-201ENST00000445180 INTS3Q68E01 1043 aaKnown RBP18.65■□□□□ 0.58
LINC01648-201ENST00000445180 PARP4Q9UKK3 1724 aaKnown RBP18.65■□□□□ 0.58
LINC01648-201ENST00000445180 SCN11AQ9UI33 1791 aa18.65■□□□□ 0.58
LINC01648-201ENST00000445180 ADAMTS2O95450 1211 aa18.64■□□□□ 0.58
LINC01648-201ENST00000445180 HDGFL1Q5TGJ6 251 aa18.64■□□□□ 0.58
LINC01648-201ENST00000445180 G2E3Q7L622 706 aa18.64■□□□□ 0.58
LINC01648-201ENST00000445180 VIRMAQ69YN4 1812 aaKnown RBP18.64■□□□□ 0.57
LINC01648-201ENST00000445180 GIGYF1O75420 1035 aaPredicted RBP18.64■□□□□ 0.57
LINC01648-201ENST00000445180 ZNF790Q6PG37 636 aa18.64■□□□□ 0.57
LINC01648-201ENST00000445180 SIPA1L3O60292 1781 aaPredicted RBP18.64■□□□□ 0.57
LINC01648-201ENST00000445180 ERVV-2B6SEH9 535 aa18.63■□□□□ 0.57
LINC01648-201ENST00000445180 CABP4P57796 275 aa18.63■□□□□ 0.57
LINC01648-201ENST00000445180 RWDD1Q9H446 243 aaPredicted RBP18.63■□□□□ 0.57
LINC01648-201ENST00000445180 USP35Q9P2H5 1018 aa18.63■□□□□ 0.57
LINC01648-201ENST00000445180 RGS12O14924 1447 aa18.63■□□□□ 0.57
LINC01648-201ENST00000445180 NUTM2BA6NNL0 878 aaPredicted RBP18.62■□□□□ 0.57
LINC01648-201ENST00000445180 NUTM2EB1AL46 878 aaPredicted RBP18.62■□□□□ 0.57
LINC01648-201ENST00000445180 NUTM2AQ8IVF1 878 aaPredicted RBP18.62■□□□□ 0.57
LINC01648-201ENST00000445180 NECTIN2Q92692 538 aa18.62■□□□□ 0.57
LINC01648-201ENST00000445180 MRC1P22897 1456 aa18.62■□□□□ 0.57
LINC01648-201ENST00000445180 EIF2S2P20042 333 aaKnown RBP18.61■□□□□ 0.57
LINC01648-201ENST00000445180 FLIIQ13045 1269 aa18.61■□□□□ 0.57
LINC01648-201ENST00000445180 DDX54Q8TDD1 881 aaKnown RBP18.61■□□□□ 0.57
LINC01648-201ENST00000445180 TSHZ2Q9NRE2 1034 aa18.61■□□□□ 0.57
LINC01648-201ENST00000445180 JCADQ9P266 1359 aa18.61■□□□□ 0.57
LINC01648-201ENST00000445180 DISP2A7MBM2 1401 aa18.6■□□□□ 0.57
LINC01648-201ENST00000445180 SLC39A6Q13433 755 aa18.6■□□□□ 0.57
LINC01648-201ENST00000445180 CACNA1FO60840 1977 aa18.59■□□□□ 0.57
LINC01648-201ENST00000445180 HDAC1Q13547 482 aaPredicted RBP18.59■□□□□ 0.57
LINC01648-201ENST00000445180 THRAP3Q9Y2W1 955 aaKnown RBP18.59■□□□□ 0.57
LINC01648-201ENST00000445180 CDCA7Q9BWT1 371 aaPredicted RBP18.58■□□□□ 0.56
LINC01648-201ENST00000445180 CCT4P50991 539 aaKnown RBP18.57■□□□□ 0.56
LINC01648-201ENST00000445180 DBF4Q9UBU7 674 aaPredicted RBP18.57■□□□□ 0.56
LINC01648-201ENST00000445180 SPATA31A1Q5TZJ5 1347 aa18.57■□□□□ 0.56
LINC01648-201ENST00000445180 EXOC5O00471 708 aa18.56■□□□□ 0.56
LINC01648-201ENST00000445180 FKBP5Q13451 457 aaPredicted RBP18.56■□□□□ 0.56
LINC01648-201ENST00000445180 TTC5Q8N0Z6 440 aa18.56■□□□□ 0.56
LINC01648-201ENST00000445180 ZNF496Q96IT1 587 aaPredicted RBP18.56■□□□□ 0.56
LINC01648-201ENST00000445180 PHAXQ9H814 394 aaKnown RBP18.56■□□□□ 0.56
LINC01648-201ENST00000445180 CHPF2Q9P2E5 772 aa18.56■□□□□ 0.56
LINC01648-201ENST00000445180 SLIT2O94813 1529 aa18.56■□□□□ 0.56
LINC01648-201ENST00000445180 F6X3S4 739 aa18.55■□□□□ 0.56
LINC01648-201ENST00000445180 FMNL2Q96PY5 1086 aa18.55■□□□□ 0.56
LINC01648-201ENST00000445180 PLCH1Q4KWH8 1693 aa18.54■□□□□ 0.56
LINC01648-201ENST00000445180 PRAMEF22A3QJZ6 481 aa18.54■□□□□ 0.56
LINC01648-201ENST00000445180 SNRPA1P09661 255 aaKnown RBP18.54■□□□□ 0.56
LINC01648-201ENST00000445180 SHANK3Q9BYB0 1731 aa18.54■□□□□ 0.56
LINC01648-201ENST00000445180 SPATA31A5Q5VU36 1347 aa18.54■□□□□ 0.56
LINC01648-201ENST00000445180 SPATA31A6Q5VVP1 1343 aa18.54■□□□□ 0.56
LINC01648-201ENST00000445180 SPATA31A7Q8IWB4 1347 aa18.54■□□□□ 0.56
LINC01648-201ENST00000445180 SLC4A10Q6U841 1118 aa18.53■□□□□ 0.56
LINC01648-201ENST00000445180 DDX21Q9NR30 783 aaKnown RBP eCLIP18.53■□□□□ 0.56
LINC01648-201ENST00000445180 HYPKQ9NX55 129 aa18.53■□□□□ 0.56
LINC01648-201ENST00000445180 NRAPQ86VF7 1730 aa18.52■□□□□ 0.56
LINC01648-201ENST00000445180 BARGINQ6ZT62 677 aa18.52■□□□□ 0.56
LINC01648-201ENST00000445180 UNC5CLQ8IV45 518 aa18.52■□□□□ 0.56
LINC01648-201ENST00000445180 PDIA6Q15084 440 aa18.51■□□□□ 0.55
LINC01648-201ENST00000445180 NWD2Q9ULI1 1742 aa18.51■□□□□ 0.55
LINC01648-201ENST00000445180 SMC5Q8IY18 1101 aa18.5■□□□□ 0.55
LINC01648-201ENST00000445180 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
LINC01648-201ENST00000445180 NGLY1Q96IV0 654 aa18.5■□□□□ 0.55
LINC01648-201ENST00000445180 USP16Q9Y5T5 823 aa18.5■□□□□ 0.55
LINC01648-201ENST00000445180 ANXA1P04083 346 aa18.49■□□□□ 0.55
LINC01648-201ENST00000445180 PROSER3Q2NL68 480 aa18.49■□□□□ 0.55
LINC01648-201ENST00000445180 SKAP1Q86WV1 359 aa18.49■□□□□ 0.55
LINC01648-201ENST00000445180 TMOD3Q9NYL9 352 aa18.49■□□□□ 0.55
LINC01648-201ENST00000445180 DNAAF4Q8WXU2 420 aa18.49■□□□□ 0.55
LINC01648-201ENST00000445180 MEIS3Q99687 375 aa18.49■□□□□ 0.55
LINC01648-201ENST00000445180 C1orf115Q9H7X2 142 aa18.49■□□□□ 0.55
LINC01648-201ENST00000445180 PDZRN3Q9UPQ7 1066 aa18.49■□□□□ 0.55
LINC01648-201ENST00000445180 PXDNLA1KZ92 1463 aa18.48■□□□□ 0.55
LINC01648-201ENST00000445180 PI4KAP2A4QPH2 592 aa18.48■□□□□ 0.55
LINC01648-201ENST00000445180 VPS72Q15906 364 aa18.48■□□□□ 0.55
LINC01648-201ENST00000445180 SIRT2Q8IXJ6 389 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms