RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 WWC1Q8IX03 1113 aa11.52□□□□□ -0.57
FXR1-203ENST00000445140 EXOC5O00471 708 aa11.51□□□□□ -0.57
FXR1-203ENST00000445140 ZNF530Q6P9A1 599 aaPredicted RBP11.51□□□□□ -0.57
FXR1-203ENST00000445140 IFT57Q9NWB7 429 aa11.51□□□□□ -0.57
FXR1-203ENST00000445140 COL5A3P25940 1745 aaPredicted RBP11.51□□□□□ -0.57
FXR1-203ENST00000445140 DDB1Q16531 1140 aa11.51□□□□□ -0.57
FXR1-203ENST00000445140 C1orf141Q5JVX7 400 aa11.51□□□□□ -0.57
FXR1-203ENST00000445140 KCPQ6ZWJ8 1503 aa11.5□□□□□ -0.57
FXR1-203ENST00000445140 HEG1Q9ULI3 1381 aa11.5□□□□□ -0.57
FXR1-203ENST00000445140 RNMTO43148 476 aaKnown RBP11.5□□□□□ -0.57
FXR1-203ENST00000445140 ATXN8OSP0DMR3 200 aa11.5□□□□□ -0.57
FXR1-203ENST00000445140 RIPK4P57078 832 aa11.5□□□□□ -0.57
FXR1-203ENST00000445140 TJP1Q07157 1748 aa11.5□□□□□ -0.57
FXR1-203ENST00000445140 QSER1Q2KHR3 1735 aa11.49□□□□□ -0.57
FXR1-203ENST00000445140 CT47B1P0C2W7 299 aaPredicted RBP11.49□□□□□ -0.57
FXR1-203ENST00000445140 CCDC146Q8IYE0 955 aa11.49□□□□□ -0.57
FXR1-203ENST00000445140 ERICH6Q7L0X2 663 aa11.49□□□□□ -0.57
FXR1-203ENST00000445140 N4BP2Q86UW6 1770 aaPredicted RBP11.49□□□□□ -0.57
FXR1-203ENST00000445140 E9PSI1 815 aa11.48□□□□□ -0.57
FXR1-203ENST00000445140 CENPBP07199 599 aaPredicted RBP11.48□□□□□ -0.57
FXR1-203ENST00000445140 RXRBP28702 533 aa11.48□□□□□ -0.57
FXR1-203ENST00000445140 CHL1O00533 1208 aa11.48□□□□□ -0.57
FXR1-203ENST00000445140 IL17REQ8NFR9 667 aa11.48□□□□□ -0.57
FXR1-203ENST00000445140 CFAP44Q96MT7 982 aa11.48□□□□□ -0.57
FXR1-203ENST00000445140 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
FXR1-203ENST00000445140 GNAI1P63096 354 aa11.47□□□□□ -0.57
FXR1-203ENST00000445140 RTF1Q92541 710 aaKnown RBP11.47□□□□□ -0.57
FXR1-203ENST00000445140 TAF1LQ8IZX4 1826 aa11.47□□□□□ -0.57
FXR1-203ENST00000445140 HOXB7P09629 217 aa11.47□□□□□ -0.57
FXR1-203ENST00000445140 SLFN5Q08AF3 891 aa11.47□□□□□ -0.57
FXR1-203ENST00000445140 FAM98CQ17RN3 349 aaKnown RBP11.47□□□□□ -0.57
FXR1-203ENST00000445140 SEPT12Q8IYM1 358 aa11.47□□□□□ -0.57
FXR1-203ENST00000445140 MARCH10Q8NA82 808 aaPredicted RBP11.47□□□□□ -0.57
FXR1-203ENST00000445140 SLC52A2Q9HAB3 445 aa11.47□□□□□ -0.57
FXR1-203ENST00000445140 HMGB2P26583 209 aaKnown RBP11.46□□□□□ -0.57
FXR1-203ENST00000445140 GOLGA2Q08379 1002 aa11.46□□□□□ -0.57
FXR1-203ENST00000445140 ZNF428Q96B54 188 aa11.46□□□□□ -0.57
FXR1-203ENST00000445140 SLC4A2P04920 1241 aa11.46□□□□□ -0.58
FXR1-203ENST00000445140 POTEAQ6S8J7 498 aa11.46□□□□□ -0.58
FXR1-203ENST00000445140 MYH16Q9H6N6 1097 aa11.46□□□□□ -0.58
FXR1-203ENST00000445140 HNRNPUQ00839 825 aaKnown RBP eCLIP11.45□□□□□ -0.58
FXR1-203ENST00000445140 PODXL2Q9NZ53 605 aa11.45□□□□□ -0.58
FXR1-203ENST00000445140 TAF7Q15545 349 aaPredicted RBP11.45□□□□□ -0.58
FXR1-203ENST00000445140 FAM196AQ6ZSG2 479 aa11.44□□□□□ -0.58
FXR1-203ENST00000445140 CHMP4AQ9BY43 222 aa11.44□□□□□ -0.58
FXR1-203ENST00000445140 CCDC9Q9Y3X0 531 aaKnown RBP11.44□□□□□ -0.58
FXR1-203ENST00000445140 KRT27Q7Z3Y8 459 aa11.43□□□□□ -0.58
FXR1-203ENST00000445140 DUSP27Q5VZP5 1158 aa11.43□□□□□ -0.58
FXR1-203ENST00000445140 IBTKQ9P2D0 1353 aaPredicted RBP11.43□□□□□ -0.58
FXR1-203ENST00000445140 ERBB4Q15303 1308 aa11.42□□□□□ -0.58
FXR1-203ENST00000445140 BRPF1P55201 1214 aaPredicted RBP11.42□□□□□ -0.58
FXR1-203ENST00000445140 FANCIQ9NVI1 1328 aa11.41□□□□□ -0.58
FXR1-203ENST00000445140 SMARCC1Q92922 1105 aaPredicted RBP11.41□□□□□ -0.58
FXR1-203ENST00000445140 BCL11BQ9C0K0 894 aaPredicted RBP11.41□□□□□ -0.58
FXR1-203ENST00000445140 LGR6Q9HBX8 967 aa11.41□□□□□ -0.58
FXR1-203ENST00000445140 TEFQ10587 303 aa11.41□□□□□ -0.58
FXR1-203ENST00000445140 USP35Q9P2H5 1018 aa11.41□□□□□ -0.58
FXR1-203ENST00000445140 RRP7AQ9Y3A4 280 aaKnown RBP11.41□□□□□ -0.58
FXR1-203ENST00000445140 MPRIPQ6WCQ1 1025 aa11.4□□□□□ -0.59
FXR1-203ENST00000445140 MCM10Q7L590 875 aa11.4□□□□□ -0.59
FXR1-203ENST00000445140 NUP188Q5SRE5 1749 aa11.39□□□□□ -0.59
FXR1-203ENST00000445140 CABP4P57796 275 aa11.39□□□□□ -0.59
FXR1-203ENST00000445140 MBIPQ9NS73 344 aa11.39□□□□□ -0.59
FXR1-203ENST00000445140 BCORQ6W2J9 1755 aa11.39□□□□□ -0.59
FXR1-203ENST00000445140 TMOD3Q9NYL9 352 aa11.39□□□□□ -0.59
FXR1-203ENST00000445140 COL24A1Q17RW2 1714 aa11.38□□□□□ -0.59
FXR1-203ENST00000445140 RGL2O15211 777 aa11.38□□□□□ -0.59
FXR1-203ENST00000445140 EIF4A1P60842 406 aaKnown RBP11.38□□□□□ -0.59
FXR1-203ENST00000445140 ZNF790Q6PG37 636 aa11.38□□□□□ -0.59
FXR1-203ENST00000445140 CCDC125Q86Z20 511 aa11.38□□□□□ -0.59
FXR1-203ENST00000445140 DDX54Q8TDD1 881 aaKnown RBP11.38□□□□□ -0.59
FXR1-203ENST00000445140 ALDH1L2Q3SY69 923 aa11.37□□□□□ -0.59
FXR1-203ENST00000445140 PIGBQ92521 554 aa11.37□□□□□ -0.59
FXR1-203ENST00000445140 TEX13AQ9BXU3 409 aaPredicted RBP11.37□□□□□ -0.59
FXR1-203ENST00000445140 C4BP0C0L5 1744 aa11.37□□□□□ -0.59
FXR1-203ENST00000445140 BTBD11A6QL63 1104 aa11.37□□□□□ -0.59
FXR1-203ENST00000445140 PLSCR1O15162 318 aa11.37□□□□□ -0.59
FXR1-203ENST00000445140 SPINK5Q9NQ38 1064 aaPredicted RBP11.37□□□□□ -0.59
FXR1-203ENST00000445140 SCN7AQ01118 1682 aa11.37□□□□□ -0.59
FXR1-203ENST00000445140 UBR3Q6ZT12 1888 aa11.36□□□□□ -0.59
FXR1-203ENST00000445140 DCTN1Q14203 1278 aa11.36□□□□□ -0.59
FXR1-203ENST00000445140 TSPYL4Q9UJ04 414 aa11.36□□□□□ -0.59
FXR1-203ENST00000445140 RNF123Q5XPI4 1314 aa11.36□□□□□ -0.59
FXR1-203ENST00000445140 PXDNLA1KZ92 1463 aa11.36□□□□□ -0.59
FXR1-203ENST00000445140 FMNL2Q96PY5 1086 aa11.36□□□□□ -0.59
FXR1-203ENST00000445140 ATG3Q9NT62 314 aa11.36□□□□□ -0.59
FXR1-203ENST00000445140 PALLDQ8WX93 1383 aa11.35□□□□□ -0.59
FXR1-203ENST00000445140 PAXIP1Q6ZW49 1069 aaPredicted RBP11.35□□□□□ -0.59
FXR1-203ENST00000445140 NFATC2IPQ8NCF5 419 aa11.35□□□□□ -0.59
FXR1-203ENST00000445140 ANKRD36CQ5JPF3 1778 aa11.35□□□□□ -0.59
FXR1-203ENST00000445140 NEUROD2Q15784 382 aa11.35□□□□□ -0.59
FXR1-203ENST00000445140 SLC27A3Q5K4L6 730 aa11.35□□□□□ -0.59
FXR1-203ENST00000445140 THUMPD2Q9BTF0 503 aaKnown RBP11.35□□□□□ -0.59
FXR1-203ENST00000445140 TUBGCP6Q96RT7 1819 aa11.34□□□□□ -0.59
FXR1-203ENST00000445140 PRIM1P49642 420 aaKnown RBP11.34□□□□□ -0.59
FXR1-203ENST00000445140 CNTNAP4Q9C0A0 1308 aa11.34□□□□□ -0.59
FXR1-203ENST00000445140 GIGYF1O75420 1035 aaPredicted RBP11.33□□□□□ -0.59
FXR1-203ENST00000445140 SNRPA1P09661 255 aaKnown RBP11.33□□□□□ -0.59
FXR1-203ENST00000445140 C4AP0C0L4 1744 aa11.33□□□□□ -0.6
FXR1-203ENST00000445140 VAMP4O75379 141 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms