RNA–Protein interactions for RNA: ENST00000445020.1

KNOP1P4-201, Transcript of lysine rich nucleolar protein 1 pseudogene 4, humanhuman

BASIC

Gene KNOP1P4, Length 1,438 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P4-201ENST00000445020 CABP4P57796 275 aa15.46■□□□□ 0.07
KNOP1P4-201ENST00000445020 BABAM1Q9NWV8 329 aa15.46■□□□□ 0.07
KNOP1P4-201ENST00000445020 C5P01031 1676 aa15.46■□□□□ 0.07
KNOP1P4-201ENST00000445020 HMGB2P26583 209 aaKnown RBP15.45■□□□□ 0.06
KNOP1P4-201ENST00000445020 PRIM1P49642 420 aaKnown RBP15.45■□□□□ 0.06
KNOP1P4-201ENST00000445020 LGR6Q9HBX8 967 aa15.45■□□□□ 0.06
KNOP1P4-201ENST00000445020 TRIM35Q9UPQ4 493 aa15.45■□□□□ 0.06
KNOP1P4-201ENST00000445020 NUP188Q5SRE5 1749 aa15.45■□□□□ 0.06
KNOP1P4-201ENST00000445020 TRIM37O94972 964 aa15.44■□□□□ 0.06
KNOP1P4-201ENST00000445020 SMARCC1Q92922 1105 aaPredicted RBP15.44■□□□□ 0.06
KNOP1P4-201ENST00000445020 ACSBG1Q96GR2 724 aa15.44■□□□□ 0.06
KNOP1P4-201ENST00000445020 QSER1Q2KHR3 1735 aa15.44■□□□□ 0.06
KNOP1P4-201ENST00000445020 TJP1Q07157 1748 aa15.44■□□□□ 0.06
KNOP1P4-201ENST00000445020 PLSCR1O15162 318 aa15.43■□□□□ 0.06
KNOP1P4-201ENST00000445020 SF3B2Q13435 895 aaKnown RBP15.43■□□□□ 0.06
KNOP1P4-201ENST00000445020 SYTL4Q96C24 671 aaPredicted RBP15.43■□□□□ 0.06
KNOP1P4-201ENST00000445020 RRP7AQ9Y3A4 280 aaKnown RBP15.43■□□□□ 0.06
KNOP1P4-201ENST00000445020 KCNQ2O43526 872 aa15.43■□□□□ 0.06
KNOP1P4-201ENST00000445020 NEUROD2Q15784 382 aa15.43■□□□□ 0.06
KNOP1P4-201ENST00000445020 MCM10Q7L590 875 aa15.43■□□□□ 0.06
KNOP1P4-201ENST00000445020 NFATC2IPQ8NCF5 419 aa15.43■□□□□ 0.06
KNOP1P4-201ENST00000445020 PIGBQ92521 554 aa15.43■□□□□ 0.06
KNOP1P4-201ENST00000445020 IL16Q14005 1332 aa15.42■□□□□ 0.06
KNOP1P4-201ENST00000445020 KCPQ6ZWJ8 1503 aa15.42■□□□□ 0.06
KNOP1P4-201ENST00000445020 TAF7Q15545 349 aaPredicted RBP15.42■□□□□ 0.06
KNOP1P4-201ENST00000445020 WWC1Q8IX03 1113 aa15.42■□□□□ 0.06
KNOP1P4-201ENST00000445020 UPF1Q92900 1129 aaKnown RBP eCLIP15.42■□□□□ 0.06
KNOP1P4-201ENST00000445020 BAG6P46379 1132 aa15.41■□□□□ 0.06
KNOP1P4-201ENST00000445020 DCTN1Q14203 1278 aa15.41■□□□□ 0.06
KNOP1P4-201ENST00000445020 WDR63Q8IWG1 891 aa15.41■□□□□ 0.06
KNOP1P4-201ENST00000445020 MYH14Q7Z406 1995 aaKnown RBP15.4■□□□□ 0.06
KNOP1P4-201ENST00000445020 PALLDQ8WX93 1383 aa15.4■□□□□ 0.06
KNOP1P4-201ENST00000445020 ZNF521Q96K83 1311 aa15.39■□□□□ 0.05
KNOP1P4-201ENST00000445020 APBA3O96018 575 aa15.39■□□□□ 0.05
KNOP1P4-201ENST00000445020 GNAI1P63096 354 aa15.39■□□□□ 0.05
KNOP1P4-201ENST00000445020 IFT57Q9NWB7 429 aa15.39■□□□□ 0.05
KNOP1P4-201ENST00000445020 UBR3Q6ZT12 1888 aa15.39■□□□□ 0.05
KNOP1P4-201ENST00000445020 TUBGCP6Q96RT7 1819 aa15.38■□□□□ 0.05
KNOP1P4-201ENST00000445020 BTBD11A6QL63 1104 aa15.38■□□□□ 0.05
KNOP1P4-201ENST00000445020 SLC27A3Q5K4L6 730 aa15.38■□□□□ 0.05
KNOP1P4-201ENST00000445020 ZNF790Q6PG37 636 aa15.38■□□□□ 0.05
KNOP1P4-201ENST00000445020 TTC5Q8N0Z6 440 aa15.38■□□□□ 0.05
KNOP1P4-201ENST00000445020 CFAP44Q96MT7 982 aa15.38■□□□□ 0.05
KNOP1P4-201ENST00000445020 ATG3Q9NT62 314 aa15.38■□□□□ 0.05
KNOP1P4-201ENST00000445020 C4BP0C0L5 1744 aa15.38■□□□□ 0.05
KNOP1P4-201ENST00000445020 PTF1AQ7RTS3 328 aa15.37■□□□□ 0.05
KNOP1P4-201ENST00000445020 VSIG10Q8N0Z9 540 aa15.37■□□□□ 0.05
KNOP1P4-201ENST00000445020 THUMPD2Q9BTF0 503 aaKnown RBP15.37■□□□□ 0.05
KNOP1P4-201ENST00000445020 CHL1O00533 1208 aa15.36■□□□□ 0.05
KNOP1P4-201ENST00000445020 ZNF853P0CG23 659 aa15.36■□□□□ 0.05
KNOP1P4-201ENST00000445020 ASAP1Q9ULH1 1129 aa15.35■□□□□ 0.05
KNOP1P4-201ENST00000445020 ZBED9Q6R2W3 1325 aa15.35■□□□□ 0.05
KNOP1P4-201ENST00000445020 SOCS7O14512 581 aa15.34■□□□□ 0.05
KNOP1P4-201ENST00000445020 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
KNOP1P4-201ENST00000445020 CAMKK2Q96RR4 588 aa15.34■□□□□ 0.05
KNOP1P4-201ENST00000445020 HEG1Q9ULI3 1381 aa15.34■□□□□ 0.05
KNOP1P4-201ENST00000445020 LOC102724428A0A0B4J2F2 783 aa15.34■□□□□ 0.05
KNOP1P4-201ENST00000445020 SIK1P57059 783 aa15.34■□□□□ 0.05
KNOP1P4-201ENST00000445020 FMNL2Q96PY5 1086 aa15.34■□□□□ 0.05
KNOP1P4-201ENST00000445020 TSPYL4Q9UJ04 414 aa15.34■□□□□ 0.05
KNOP1P4-201ENST00000445020 SOS1Q07889 1333 aaPredicted RBP15.33■□□□□ 0.05
KNOP1P4-201ENST00000445020 GOLGA2Q08379 1002 aa15.33■□□□□ 0.04
KNOP1P4-201ENST00000445020 TXNRD1Q16881 649 aa15.33■□□□□ 0.04
KNOP1P4-201ENST00000445020 TEX13AQ9BXU3 409 aaPredicted RBP15.33■□□□□ 0.04
KNOP1P4-201ENST00000445020 MYH16Q9H6N6 1097 aa15.33■□□□□ 0.04
KNOP1P4-201ENST00000445020 SLC39A6Q13433 755 aa15.32■□□□□ 0.04
KNOP1P4-201ENST00000445020 C4AP0C0L4 1744 aa15.31■□□□□ 0.04
KNOP1P4-201ENST00000445020 E9PSI1 815 aa15.31■□□□□ 0.04
KNOP1P4-201ENST00000445020 HOXB7P09629 217 aa15.31■□□□□ 0.04
KNOP1P4-201ENST00000445020 EIF4A1P60842 406 aaKnown RBP15.31■□□□□ 0.04
KNOP1P4-201ENST00000445020 EN1Q05925 392 aaPredicted RBP15.31■□□□□ 0.04
KNOP1P4-201ENST00000445020 CHMP4AQ9BY43 222 aa15.31■□□□□ 0.04
KNOP1P4-201ENST00000445020 CCNL1Q9UK58 526 aaPredicted RBP15.31■□□□□ 0.04
KNOP1P4-201ENST00000445020 SALL2Q9Y467 1007 aaPredicted RBP15.31■□□□□ 0.04
KNOP1P4-201ENST00000445020 DEFB132Q7Z7B7 95 aa15.3■□□□□ 0.04
KNOP1P4-201ENST00000445020 ZNF496Q96IT1 587 aaPredicted RBP15.3■□□□□ 0.04
KNOP1P4-201ENST00000445020 MBIPQ9NS73 344 aa15.3■□□□□ 0.04
KNOP1P4-201ENST00000445020 PTCD1O75127 700 aaKnown RBP15.29■□□□□ 0.04
KNOP1P4-201ENST00000445020 SNRPA1P09661 255 aaKnown RBP15.29■□□□□ 0.04
KNOP1P4-201ENST00000445020 ATP6V1AP38606 617 aa15.29■□□□□ 0.04
KNOP1P4-201ENST00000445020 EZH2Q15910 746 aaKnown RBP15.29■□□□□ 0.04
KNOP1P4-201ENST00000445020 PROM2Q8N271 834 aa15.29■□□□□ 0.04
KNOP1P4-201ENST00000445020 RBM42Q9BTD8 480 aaKnown RBP15.29■□□□□ 0.04
KNOP1P4-201ENST00000445020 CNTNAP4Q9C0A0 1308 aa15.28■□□□□ 0.04
KNOP1P4-201ENST00000445020 FANCIQ9NVI1 1328 aa15.28■□□□□ 0.04
KNOP1P4-201ENST00000445020 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
KNOP1P4-201ENST00000445020 KCNQ3O43525 872 aa15.27■□□□□ 0.04
KNOP1P4-201ENST00000445020 GIGYF1O75420 1035 aaPredicted RBP15.27■□□□□ 0.04
KNOP1P4-201ENST00000445020 SLFN5Q08AF3 891 aa15.27■□□□□ 0.04
KNOP1P4-201ENST00000445020 SLC4A9Q96Q91 983 aa15.27■□□□□ 0.04
KNOP1P4-201ENST00000445020 MIS18AQ9NYP9 233 aa15.27■□□□□ 0.04
KNOP1P4-201ENST00000445020 BCORQ6W2J9 1755 aa15.27■□□□□ 0.04
KNOP1P4-201ENST00000445020 ERBB4Q15303 1308 aa15.27■□□□□ 0.03
KNOP1P4-201ENST00000445020 STARD3NLO95772 234 aa15.26■□□□□ 0.03
KNOP1P4-201ENST00000445020 RC3H1Q5TC82 1133 aaKnown RBP15.26■□□□□ 0.03
KNOP1P4-201ENST00000445020 TRMT2AQ8IZ69 625 aaKnown RBP15.26■□□□□ 0.03
KNOP1P4-201ENST00000445020 LRRC4BQ9NT99 713 aa15.26■□□□□ 0.03
KNOP1P4-201ENST00000445020 COL24A1Q17RW2 1714 aa15.26■□□□□ 0.03
KNOP1P4-201ENST00000445020 NUP98P52948 1817 aa15.26■□□□□ 0.03
KNOP1P4-201ENST00000445020 CASZ1Q86V15 1759 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms