RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 RAPGEF4Q8WZA2 1011 aa23.74■■□□□ 1.39
SEMA3D-202ENST00000444867 ABCA3Q99758 1704 aa23.74■■□□□ 1.39
SEMA3D-202ENST00000444867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.74■■□□□ 1.39
SEMA3D-202ENST00000444867 SCN11AQ9UI33 1791 aa23.74■■□□□ 1.39
SEMA3D-202ENST00000444867 CCT4P50991 539 aaKnown RBP23.73■■□□□ 1.39
SEMA3D-202ENST00000444867 CABLES1Q8TDN4 633 aa23.73■■□□□ 1.39
SEMA3D-202ENST00000444867 EIF4A1P60842 406 aaKnown RBP23.73■■□□□ 1.39
SEMA3D-202ENST00000444867 NUCB1Q02818 461 aa23.73■■□□□ 1.39
SEMA3D-202ENST00000444867 NLRP2Q9NX02 1062 aa23.73■■□□□ 1.39
SEMA3D-202ENST00000444867 PKD1L3Q7Z443 1732 aa23.73■■□□□ 1.39
SEMA3D-202ENST00000444867 TATP17735 454 aaPredicted RBP23.72■■□□□ 1.39
SEMA3D-202ENST00000444867 MPRIPQ6WCQ1 1025 aa23.72■■□□□ 1.39
SEMA3D-202ENST00000444867 PXDNLA1KZ92 1463 aa23.72■■□□□ 1.39
SEMA3D-202ENST00000444867 UBAP1LF5GYI3 381 aa23.71■■□□□ 1.39
SEMA3D-202ENST00000444867 G2E3Q7L622 706 aa23.71■■□□□ 1.39
SEMA3D-202ENST00000444867 BTBD11A6QL63 1104 aa23.7■■□□□ 1.39
SEMA3D-202ENST00000444867 FLIIQ13045 1269 aa23.7■■□□□ 1.39
SEMA3D-202ENST00000444867 SPG7Q9UQ90 795 aa23.7■■□□□ 1.39
SEMA3D-202ENST00000444867 CSB-PGBD3P0DP91 1061 aa23.7■■□□□ 1.38
SEMA3D-202ENST00000444867 NPM2Q86SE8 214 aaKnown RBP23.7■■□□□ 1.38
SEMA3D-202ENST00000444867 C1orf115Q9H7X2 142 aa23.7■■□□□ 1.38
SEMA3D-202ENST00000444867 HDGFL1Q5TGJ6 251 aa23.69■■□□□ 1.38
SEMA3D-202ENST00000444867 RPAP2Q8IXW5 612 aaPredicted RBP23.69■■□□□ 1.38
SEMA3D-202ENST00000444867 ATP10DQ9P241 1426 aa23.68■■□□□ 1.38
SEMA3D-202ENST00000444867 MEGF6O75095 1541 aa23.67■■□□□ 1.38
SEMA3D-202ENST00000444867 PARP4Q9UKK3 1724 aaKnown RBP23.67■■□□□ 1.38
SEMA3D-202ENST00000444867 CHD1LQ86WJ1 897 aa23.67■■□□□ 1.38
SEMA3D-202ENST00000444867 SIRT2Q8IXJ6 389 aa23.67■■□□□ 1.38
SEMA3D-202ENST00000444867 CHRNA2Q15822 529 aa23.66■■□□□ 1.38
SEMA3D-202ENST00000444867 ANKRD44Q8N8A2 993 aa23.66■■□□□ 1.38
SEMA3D-202ENST00000444867 DDRGK1Q96HY6 314 aa23.66■■□□□ 1.38
SEMA3D-202ENST00000444867 TOM1O60784 492 aa23.66■■□□□ 1.38
SEMA3D-202ENST00000444867 FKBP5Q13451 457 aaPredicted RBP23.65■■□□□ 1.38
SEMA3D-202ENST00000444867 ERICH6Q7L0X2 663 aa23.65■■□□□ 1.38
SEMA3D-202ENST00000444867 NOP58Q9Y2X3 529 aaKnown RBP23.65■■□□□ 1.38
SEMA3D-202ENST00000444867 HEG1Q9ULI3 1381 aa23.65■■□□□ 1.38
SEMA3D-202ENST00000444867 PIP4K2BP78356 416 aa23.63■■□□□ 1.37
SEMA3D-202ENST00000444867 IFNL2Q8IZJ0 200 aa23.63■■□□□ 1.37
SEMA3D-202ENST00000444867 PHKG2P15735 406 aa23.62■■□□□ 1.37
SEMA3D-202ENST00000444867 SLC4A10Q6U841 1118 aa23.62■■□□□ 1.37
SEMA3D-202ENST00000444867 MEIS3Q99687 375 aa23.62■■□□□ 1.37
SEMA3D-202ENST00000444867 DCTPP1Q9H773 170 aa23.62■■□□□ 1.37
SEMA3D-202ENST00000444867 PRDM11Q9NQV5 511 aa23.62■■□□□ 1.37
SEMA3D-202ENST00000444867 ZBTB47Q9UFB7 747 aaPredicted RBP23.62■■□□□ 1.37
SEMA3D-202ENST00000444867 MRC1P22897 1456 aa23.62■■□□□ 1.37
SEMA3D-202ENST00000444867 F6X3S4 739 aa23.62■■□□□ 1.37
SEMA3D-202ENST00000444867 CEP85Q6P2H3 762 aa23.62■■□□□ 1.37
SEMA3D-202ENST00000444867 NECTIN2Q92692 538 aa23.62■■□□□ 1.37
SEMA3D-202ENST00000444867 WDR17Q8IZU2 1322 aa23.62■■□□□ 1.37
SEMA3D-202ENST00000444867 KDM6AO15550 1401 aaPredicted RBP23.61■■□□□ 1.37
SEMA3D-202ENST00000444867 KCNQ3O43525 872 aa23.61■■□□□ 1.37
SEMA3D-202ENST00000444867 HSP90AB1P08238 724 aaKnown RBP23.61■■□□□ 1.37
SEMA3D-202ENST00000444867 COL5A2P05997 1499 aaPredicted RBP23.6■■□□□ 1.37
SEMA3D-202ENST00000444867 ANKRD45Q5TZF3 282 aa23.6■■□□□ 1.37
SEMA3D-202ENST00000444867 LNPKQ9C0E8 428 aa23.6■■□□□ 1.37
SEMA3D-202ENST00000444867 GNAI3P08754 354 aa23.59■■□□□ 1.37
SEMA3D-202ENST00000444867 HMMRO75330 724 aa23.59■■□□□ 1.37
SEMA3D-202ENST00000444867 SLC52A2Q9HAB3 445 aa23.59■■□□□ 1.37
SEMA3D-202ENST00000444867 ROBO1Q9Y6N7 1651 aa23.58■■□□□ 1.37
SEMA3D-202ENST00000444867 EIF2S2P20042 333 aaKnown RBP23.58■■□□□ 1.36
SEMA3D-202ENST00000444867 GIGYF1O75420 1035 aaPredicted RBP23.57■■□□□ 1.36
SEMA3D-202ENST00000444867 GNAI2P04899 355 aa23.57■■□□□ 1.36
SEMA3D-202ENST00000444867 DCAF5Q96JK2 942 aa23.57■■□□□ 1.36
SEMA3D-202ENST00000444867 DBF4Q9UBU7 674 aaPredicted RBP23.57■■□□□ 1.36
SEMA3D-202ENST00000444867 ANP32EQ9BTT0 268 aa23.56■■□□□ 1.36
SEMA3D-202ENST00000444867 CHPF2Q9P2E5 772 aa23.56■■□□□ 1.36
SEMA3D-202ENST00000444867 FBXO41Q8TF61 875 aa23.55■■□□□ 1.36
SEMA3D-202ENST00000444867 UPF2Q9HAU5 1272 aaKnown RBP23.55■■□□□ 1.36
SEMA3D-202ENST00000444867 PHAXQ9H814 394 aaKnown RBP23.55■■□□□ 1.36
SEMA3D-202ENST00000444867 AHDC1Q5TGY3 1603 aaPredicted RBP23.54■■□□□ 1.36
SEMA3D-202ENST00000444867 CYP27B1O15528 508 aa23.53■■□□□ 1.36
SEMA3D-202ENST00000444867 BMP2KLQ5H9B9 411 aa23.53■■□□□ 1.36
SEMA3D-202ENST00000444867 ZNF790Q6PG37 636 aa23.53■■□□□ 1.36
SEMA3D-202ENST00000444867 TOM1L2Q6ZVM7 507 aa23.53■■□□□ 1.36
SEMA3D-202ENST00000444867 CARD10Q9BWT7 1032 aa23.53■■□□□ 1.36
SEMA3D-202ENST00000444867 C5P01031 1676 aa23.53■■□□□ 1.36
SEMA3D-202ENST00000444867 COL22A1Q8NFW1 1626 aaPredicted RBP23.51■■□□□ 1.35
SEMA3D-202ENST00000444867 SEC24BO95487 1268 aa23.51■■□□□ 1.35
SEMA3D-202ENST00000444867 SRCIN1Q9C0H9 1055 aa23.51■■□□□ 1.35
SEMA3D-202ENST00000444867 HYPKQ9NX55 129 aa23.51■■□□□ 1.35
SEMA3D-202ENST00000444867 PCDH11XQ9BZA7 1347 aa23.5■■□□□ 1.35
SEMA3D-202ENST00000444867 PCDH11YQ9BZA8 1340 aa23.5■■□□□ 1.35
SEMA3D-202ENST00000444867 DNAAF4Q8WXU2 420 aa23.5■■□□□ 1.35
SEMA3D-202ENST00000444867 NFATC2IPQ8NCF5 419 aa23.49■■□□□ 1.35
SEMA3D-202ENST00000444867 SHANK3Q9BYB0 1731 aa23.49■■□□□ 1.35
SEMA3D-202ENST00000444867 COL14A1Q05707 1796 aaKnown RBP23.49■■□□□ 1.35
SEMA3D-202ENST00000444867 ZCRB1Q8TBF4 217 aaKnown RBP23.48■■□□□ 1.35
SEMA3D-202ENST00000444867 UBTFL1P0CB47 393 aaPredicted RBP23.48■■□□□ 1.35
SEMA3D-202ENST00000444867 ATP8B2P98198 1209 aa23.48■■□□□ 1.35
SEMA3D-202ENST00000444867 USP44Q9H0E7 712 aa23.48■■□□□ 1.35
SEMA3D-202ENST00000444867 DDX21Q9NR30 783 aaKnown RBP eCLIP23.48■■□□□ 1.35
SEMA3D-202ENST00000444867 LAMB4A4D0S4 1761 aa23.47■■□□□ 1.35
SEMA3D-202ENST00000444867 ADCY9O60503 1353 aa23.46■■□□□ 1.35
SEMA3D-202ENST00000444867 PI4KAP2A4QPH2 592 aa23.46■■□□□ 1.35
SEMA3D-202ENST00000444867 IL2RBP14784 551 aa23.46■■□□□ 1.35
SEMA3D-202ENST00000444867 BEND3Q5T5X7 828 aa23.46■■□□□ 1.35
SEMA3D-202ENST00000444867 PI4KAP1Q8N8J0 262 aa23.46■■□□□ 1.35
SEMA3D-202ENST00000444867 EVA1CP58658 441 aa23.45■■□□□ 1.34
SEMA3D-202ENST00000444867 TTC5Q8N0Z6 440 aa23.45■■□□□ 1.34
SEMA3D-202ENST00000444867 TBC1D32Q96NH3 1257 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms