RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 LRRCC1Q9C099 1032 aa26.58■■□□□ 1.85
SKIDA1-201ENST00000444772 CACNA1FO60840 1977 aa26.58■■□□□ 1.84
SKIDA1-201ENST00000444772 SOX12O15370 315 aa26.57■■□□□ 1.84
SKIDA1-201ENST00000444772 FLIIQ13045 1269 aa26.57■■□□□ 1.84
SKIDA1-201ENST00000444772 PPP1R9BQ96SB3 815 aa26.57■■□□□ 1.84
SKIDA1-201ENST00000444772 SRCIN1Q9C0H9 1055 aa26.57■■□□□ 1.84
SKIDA1-201ENST00000444772 LMBRD1Q9NUN5 540 aa26.57■■□□□ 1.84
SKIDA1-201ENST00000444772 NASPP49321 788 aaPredicted RBP26.56■■□□□ 1.84
SKIDA1-201ENST00000444772 TBX22Q9Y458 520 aa26.56■■□□□ 1.84
SKIDA1-201ENST00000444772 CEP170BQ9Y4F5 1589 aaPredicted RBP26.56■■□□□ 1.84
SKIDA1-201ENST00000444772 ATP8B2P98198 1209 aa26.56■■□□□ 1.84
SKIDA1-201ENST00000444772 NGDNQ8NEJ9 315 aaKnown RBP26.56■■□□□ 1.84
SKIDA1-201ENST00000444772 RIMS1Q86UR5 1692 aaKnown RBP26.56■■□□□ 1.84
SKIDA1-201ENST00000444772 PXDNLA1KZ92 1463 aa26.55■■□□□ 1.84
SKIDA1-201ENST00000444772 MCCP23508 829 aa26.55■■□□□ 1.84
SKIDA1-201ENST00000444772 AMOTL2Q9Y2J4 779 aa26.55■■□□□ 1.84
SKIDA1-201ENST00000444772 FAM208AQ9UK61 1670 aaKnown RBP26.55■■□□□ 1.84
SKIDA1-201ENST00000444772 GNAT3A8MTJ3 354 aa26.55■■□□□ 1.84
SKIDA1-201ENST00000444772 ANAPC15P60006 121 aa26.54■■□□□ 1.84
SKIDA1-201ENST00000444772 AK9Q5TCS8 1911 aa26.54■■□□□ 1.84
SKIDA1-201ENST00000444772 SLIT1O75093 1534 aa26.54■■□□□ 1.84
SKIDA1-201ENST00000444772 XRN1Q8IZH2 1706 aaKnown RBP26.53■■□□□ 1.84
SKIDA1-201ENST00000444772 DIP2AQ14689 1571 aa26.53■■□□□ 1.84
SKIDA1-201ENST00000444772 MX1P20591 662 aa26.53■■□□□ 1.84
SKIDA1-201ENST00000444772 ESYT1Q9BSJ8 1104 aa26.53■■□□□ 1.84
SKIDA1-201ENST00000444772 N4BP2Q86UW6 1770 aaPredicted RBP26.53■■□□□ 1.84
SKIDA1-201ENST00000444772 FKBP5Q13451 457 aaPredicted RBP26.53■■□□□ 1.84
SKIDA1-201ENST00000444772 STAP2Q9UGK3 403 aa26.53■■□□□ 1.84
SKIDA1-201ENST00000444772 TUBGCP6Q96RT7 1819 aa26.53■■□□□ 1.84
SKIDA1-201ENST00000444772 EPB41L2O43491 1005 aaKnown RBP26.52■■□□□ 1.84
SKIDA1-201ENST00000444772 SLC26A8Q96RN1 970 aa26.52■■□□□ 1.84
SKIDA1-201ENST00000444772 EXOC6BQ9Y2D4 811 aa26.52■■□□□ 1.84
SKIDA1-201ENST00000444772 AOX1Q06278 1338 aa26.52■■□□□ 1.84
SKIDA1-201ENST00000444772 PIK3C2AO00443 1686 aa26.52■■□□□ 1.84
SKIDA1-201ENST00000444772 ARHGAP23Q9P227 1491 aa26.52■■□□□ 1.84
SKIDA1-201ENST00000444772 ZGPATQ8N5A5 531 aaKnown RBP26.51■■□□□ 1.83
SKIDA1-201ENST00000444772 IL17RAQ96F46 866 aa26.51■■□□□ 1.83
SKIDA1-201ENST00000444772 ANKARQ7Z5J8 1434 aa26.5■■□□□ 1.83
SKIDA1-201ENST00000444772 PKP1Q13835 747 aa26.5■■□□□ 1.83
SKIDA1-201ENST00000444772 MAP3K5Q99683 1374 aa26.49■■□□□ 1.83
SKIDA1-201ENST00000444772 NEK4P51957 841 aa26.49■■□□□ 1.83
SKIDA1-201ENST00000444772 ZSCAN23Q3MJ62 389 aa26.49■■□□□ 1.83
SKIDA1-201ENST00000444772 CAVIN1Q6NZI2 390 aaKnown RBP26.48■■□□□ 1.83
SKIDA1-201ENST00000444772 ZDHHC9Q9Y397 364 aa26.48■■□□□ 1.83
SKIDA1-201ENST00000444772 USP54Q70EL1 1684 aa26.48■■□□□ 1.83
SKIDA1-201ENST00000444772 ERBB4Q15303 1308 aa26.48■■□□□ 1.83
SKIDA1-201ENST00000444772 TAF7Q15545 349 aaPredicted RBP26.47■■□□□ 1.83
SKIDA1-201ENST00000444772 INTS4Q96HW7 963 aaKnown RBP26.47■■□□□ 1.83
SKIDA1-201ENST00000444772 TMX3Q96JJ7 454 aa26.47■■□□□ 1.83
SKIDA1-201ENST00000444772 NAP1L5Q96NT1 182 aaPredicted RBP26.47■■□□□ 1.83
SKIDA1-201ENST00000444772 CHMLP26374 656 aa26.47■■□□□ 1.83
SKIDA1-201ENST00000444772 CUL4AQ13619 759 aa26.47■■□□□ 1.83
SKIDA1-201ENST00000444772 PNMA6EA0A0J9YXQ4 647 aa26.46■■□□□ 1.83
SKIDA1-201ENST00000444772 HOXC9P31274 260 aa26.46■■□□□ 1.83
SKIDA1-201ENST00000444772 NLRP6P59044 892 aa26.46■■□□□ 1.83
SKIDA1-201ENST00000444772 NCLP19338 710 aaKnown RBP26.46■■□□□ 1.83
SKIDA1-201ENST00000444772 NWD1Q149M9 1564 aa26.45■■□□□ 1.82
SKIDA1-201ENST00000444772 PRPF40AO75400 957 aaKnown RBP26.44■■□□□ 1.82
SKIDA1-201ENST00000444772 RGPD8O14715 1765 aaPredicted RBP26.44■■□□□ 1.82
SKIDA1-201ENST00000444772 CHMP4AQ9BY43 222 aa26.44■■□□□ 1.82
SKIDA1-201ENST00000444772 RAB11FIP3O75154 756 aa26.43■■□□□ 1.82
SKIDA1-201ENST00000444772 HS1BP3Q53T59 392 aa26.43■■□□□ 1.82
SKIDA1-201ENST00000444772 LRRFIP2Q9Y608 721 aaKnown RBP26.43■■□□□ 1.82
SKIDA1-201ENST00000444772 UBTFL1P0CB47 393 aaPredicted RBP26.43■■□□□ 1.82
SKIDA1-201ENST00000444772 IL17REQ8NFR9 667 aa26.43■■□□□ 1.82
SKIDA1-201ENST00000444772 TRIM6-TRIM34B2RNG4 842 aa26.42■■□□□ 1.82
SKIDA1-201ENST00000444772 MBD3O95983 291 aa26.42■■□□□ 1.82
SKIDA1-201ENST00000444772 SSH3Q8TE77 659 aa26.42■■□□□ 1.82
SKIDA1-201ENST00000444772 USP44Q9H0E7 712 aa26.42■■□□□ 1.82
SKIDA1-201ENST00000444772 CEBPAP49715 358 aaPredicted RBP26.42■■□□□ 1.82
SKIDA1-201ENST00000444772 RILPL2Q969X0 211 aa26.42■■□□□ 1.82
SKIDA1-201ENST00000444772 ANO2Q9NQ90 1003 aa26.42■■□□□ 1.82
SKIDA1-201ENST00000444772 ZSCAN30Q86W11 494 aa26.41■■□□□ 1.82
SKIDA1-201ENST00000444772 BRD1O95696 1058 aa26.41■■□□□ 1.82
SKIDA1-201ENST00000444772 GPT2Q8TD30 523 aa26.41■■□□□ 1.82
SKIDA1-201ENST00000444772 TSHZ3Q63HK5 1081 aa26.4■■□□□ 1.82
SKIDA1-201ENST00000444772 PLPPR3Q6T4P5 718 aa26.4■■□□□ 1.82
SKIDA1-201ENST00000444772 MARF1Q9Y4F3 1742 aaKnown RBP26.39■■□□□ 1.81
SKIDA1-201ENST00000444772 HDGFL1Q5TGJ6 251 aa26.38■■□□□ 1.81
SKIDA1-201ENST00000444772 THEMISQ8N1K5 641 aaPredicted RBP26.38■■□□□ 1.81
SKIDA1-201ENST00000444772 HOXB7P09629 217 aa26.37■■□□□ 1.81
SKIDA1-201ENST00000444772 PALD1Q9ULE6 856 aa26.37■■□□□ 1.81
SKIDA1-201ENST00000444772 POLA2Q14181 598 aa26.36■■□□□ 1.81
SKIDA1-201ENST00000444772 NECTIN2Q92692 538 aa26.36■■□□□ 1.81
SKIDA1-201ENST00000444772 LRSAM1Q6UWE0 723 aa26.36■■□□□ 1.81
SKIDA1-201ENST00000444772 PDLIM2Q96JY6 352 aa26.35■■□□□ 1.81
SKIDA1-201ENST00000444772 RBSNQ9H1K0 784 aa26.35■■□□□ 1.81
SKIDA1-201ENST00000444772 CEMIPQ8WUJ3 1361 aa26.35■■□□□ 1.81
SKIDA1-201ENST00000444772 PRIM1P49642 420 aaKnown RBP26.34■■□□□ 1.81
SKIDA1-201ENST00000444772 HSPA4P34932 840 aa26.33■■□□□ 1.81
SKIDA1-201ENST00000444772 ABTB2Q8N961 1025 aa26.33■■□□□ 1.81
SKIDA1-201ENST00000444772 MSNP26038 577 aaKnown RBP26.32■■□□□ 1.8
SKIDA1-201ENST00000444772 KIF1BPQ96EK5 621 aa26.32■■□□□ 1.8
SKIDA1-201ENST00000444772 HSP90AB4PQ58FF6 505 aa26.32■■□□□ 1.8
SKIDA1-201ENST00000444772 PPP1R42Q7Z4L9 355 aa26.32■■□□□ 1.8
SKIDA1-201ENST00000444772 UNC5CLQ8IV45 518 aa26.32■■□□□ 1.8
SKIDA1-201ENST00000444772 TMEM63CQ9P1W3 806 aa26.32■■□□□ 1.8
SKIDA1-201ENST00000444772 SURF6O75683 361 aaKnown RBP26.31■■□□□ 1.8
SKIDA1-201ENST00000444772 RHPN1Q8TCX5 695 aa26.31■■□□□ 1.8
SKIDA1-201ENST00000444772 SYAP1Q96A49 352 aaPredicted RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms