RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 LTV1Q96GA3 475 aaPredicted RBP14.89□□□□□ -0.03
HDAC8-215ENST00000444609 PARP3Q9Y6F1 533 aa14.89□□□□□ -0.03
HDAC8-215ENST00000444609 PDE4DIPQ5VU43 2346 aa14.88□□□□□ -0.03
HDAC8-215ENST00000444609 ARFGEF1Q9Y6D6 1849 aa14.88□□□□□ -0.03
HDAC8-215ENST00000444609 BRCA1P38398 1863 aaKnown RBP14.88□□□□□ -0.03
HDAC8-215ENST00000444609 POTEIP0CG38 1075 aa14.87□□□□□ -0.03
HDAC8-215ENST00000444609 POTEJP0CG39 1038 aa14.87□□□□□ -0.03
HDAC8-215ENST00000444609 TRAPPC3LQ5T215 181 aa14.87□□□□□ -0.03
HDAC8-215ENST00000444609 DPY19L2Q6NUT2 758 aa14.87□□□□□ -0.03
HDAC8-215ENST00000444609 LOC102724428A0A0B4J2F2 783 aa14.86□□□□□ -0.03
HDAC8-215ENST00000444609 SIK1P57059 783 aa14.86□□□□□ -0.03
HDAC8-215ENST00000444609 MCOLN1Q9GZU1 580 aa14.86□□□□□ -0.03
HDAC8-215ENST00000444609 MEGF6O75095 1541 aa14.86□□□□□ -0.03
HDAC8-215ENST00000444609 RASSF10A6NK89 507 aa14.85□□□□□ -0.03
HDAC8-215ENST00000444609 GYS1P13807 737 aa14.85□□□□□ -0.03
HDAC8-215ENST00000444609 CHRNA5P30532 468 aa14.85□□□□□ -0.03
HDAC8-215ENST00000444609 KTN1Q86UP2 1357 aaKnown RBP14.85□□□□□ -0.03
HDAC8-215ENST00000444609 SBF1O95248 1867 aa14.84□□□□□ -0.03
HDAC8-215ENST00000444609 ITPK1Q13572 414 aa14.84□□□□□ -0.03
HDAC8-215ENST00000444609 DEFB115Q30KQ5 88 aa14.84□□□□□ -0.03
HDAC8-215ENST00000444609 NBPF1Q3BBV0 1214 aa14.84□□□□□ -0.03
HDAC8-215ENST00000444609 NME9Q86XW9 330 aa14.84□□□□□ -0.03
HDAC8-215ENST00000444609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.84□□□□□ -0.03
HDAC8-215ENST00000444609 CGNL1Q0VF96 1302 aa14.84□□□□□ -0.03
HDAC8-215ENST00000444609 WDR33Q9C0J8 1336 aaKnown RBP14.84□□□□□ -0.03
HDAC8-215ENST00000444609 PIGBQ92521 554 aa14.83□□□□□ -0.04
HDAC8-215ENST00000444609 ARHGEF1Q92888 912 aaKnown RBP14.83□□□□□ -0.04
HDAC8-215ENST00000444609 ITGBL1O95965 494 aaPredicted RBP14.82□□□□□ -0.04
HDAC8-215ENST00000444609 RTCBQ9Y3I0 505 aaKnown RBP14.82□□□□□ -0.04
HDAC8-215ENST00000444609 EVC2Q86UK5 1308 aa14.82□□□□□ -0.04
HDAC8-215ENST00000444609 VIRMAQ69YN4 1812 aaKnown RBP14.82□□□□□ -0.04
HDAC8-215ENST00000444609 C4AP0C0L4 1744 aa14.81□□□□□ -0.04
HDAC8-215ENST00000444609 ATP6V1AP38606 617 aa14.8□□□□□ -0.04
HDAC8-215ENST00000444609 LDHDQ86WU2 507 aa14.8□□□□□ -0.04
HDAC8-215ENST00000444609 BEGAINQ9BUH8 593 aa14.8□□□□□ -0.04
HDAC8-215ENST00000444609 ADRA2BP18089 450 aa14.79□□□□□ -0.04
HDAC8-215ENST00000444609 PCDH11XQ9BZA7 1347 aa14.79□□□□□ -0.04
HDAC8-215ENST00000444609 PCDH11YQ9BZA8 1340 aa14.79□□□□□ -0.04
HDAC8-215ENST00000444609 NFKBIEO00221 500 aa14.78□□□□□ -0.04
HDAC8-215ENST00000444609 RFC4P35249 363 aa14.78□□□□□ -0.04
HDAC8-215ENST00000444609 RAPGEF4Q8WZA2 1011 aa14.78□□□□□ -0.04
HDAC8-215ENST00000444609 LTN1O94822 1766 aa14.78□□□□□ -0.04
HDAC8-215ENST00000444609 FAM208AQ9UK61 1670 aaKnown RBP14.77□□□□□ -0.04
HDAC8-215ENST00000444609 CYP27B1O15528 508 aa14.77□□□□□ -0.05
HDAC8-215ENST00000444609 NBPF6Q5VWK0 638 aa14.77□□□□□ -0.05
HDAC8-215ENST00000444609 NBPF4Q96M43 638 aa14.77□□□□□ -0.05
HDAC8-215ENST00000444609 TATP17735 454 aaPredicted RBP14.76□□□□□ -0.05
HDAC8-215ENST00000444609 HOXC9P31274 260 aa14.76□□□□□ -0.05
HDAC8-215ENST00000444609 DDR1Q08345 913 aa14.76□□□□□ -0.05
HDAC8-215ENST00000444609 TSKSQ9UJT2 592 aa14.76□□□□□ -0.05
HDAC8-215ENST00000444609 ASAP1Q9ULH1 1129 aa14.76□□□□□ -0.05
HDAC8-215ENST00000444609 CD163L1Q9NR16 1453 aa14.76□□□□□ -0.05
HDAC8-215ENST00000444609 SBNO2Q9Y2G9 1366 aa14.75□□□□□ -0.05
HDAC8-215ENST00000444609 DDNO94850 711 aaPredicted RBP14.75□□□□□ -0.05
HDAC8-215ENST00000444609 DGKZQ13574 1117 aa14.75□□□□□ -0.05
HDAC8-215ENST00000444609 MAP2P11137 1827 aaKnown RBP14.74□□□□□ -0.05
HDAC8-215ENST00000444609 RPS6KA4O75676 772 aa14.74□□□□□ -0.05
HDAC8-215ENST00000444609 ERFEQ4G0M1 354 aa14.74□□□□□ -0.05
HDAC8-215ENST00000444609 RC3H1Q5TC82 1133 aaKnown RBP14.74□□□□□ -0.05
HDAC8-215ENST00000444609 USHBP1Q8N6Y0 703 aa14.74□□□□□ -0.05
HDAC8-215ENST00000444609 IQCA1LA6NCM1 817 aa14.73□□□□□ -0.05
HDAC8-215ENST00000444609 SOX10P56693 466 aa14.73□□□□□ -0.05
HDAC8-215ENST00000444609 GCC1Q96CN9 775 aa14.73□□□□□ -0.05
HDAC8-215ENST00000444609 GPR101Q96P66 508 aaPredicted RBP14.73□□□□□ -0.05
HDAC8-215ENST00000444609 TAF1DQ9H5J8 278 aaPredicted RBP14.73□□□□□ -0.05
HDAC8-215ENST00000444609 ABT1Q9ULW3 272 aaKnown RBP14.73□□□□□ -0.05
HDAC8-215ENST00000444609 MAP3K19Q56UN5 1328 aa14.72□□□□□ -0.05
HDAC8-215ENST00000444609 FKBP8Q14318 412 aa14.72□□□□□ -0.05
HDAC8-215ENST00000444609 NKX1-1Q15270 411 aaPredicted RBP14.72□□□□□ -0.05
HDAC8-215ENST00000444609 TTLL6Q8N841 843 aa14.72□□□□□ -0.05
HDAC8-215ENST00000444609 CAPNS2Q96L46 248 aa14.72□□□□□ -0.05
HDAC8-215ENST00000444609 ECE1P42892 770 aa14.71□□□□□ -0.05
HDAC8-215ENST00000444609 AMPHP49418 695 aa14.71□□□□□ -0.05
HDAC8-215ENST00000444609 ZNF219Q9P2Y4 722 aaPredicted RBP14.71□□□□□ -0.05
HDAC8-215ENST00000444609 POLRMTO00411 1230 aaKnown RBP14.7□□□□□ -0.06
HDAC8-215ENST00000444609 CA12O43570 354 aa14.7□□□□□ -0.06
HDAC8-215ENST00000444609 ATG3Q9NT62 314 aa14.7□□□□□ -0.06
HDAC8-215ENST00000444609 TMOD3Q9NYL9 352 aa14.7□□□□□ -0.06
HDAC8-215ENST00000444609 TIAM2Q8IVF5 1701 aa14.69□□□□□ -0.06
HDAC8-215ENST00000444609 TM4SF1P30408 202 aa14.69□□□□□ -0.06
HDAC8-215ENST00000444609 HABP4Q5JVS0 413 aaKnown RBP14.69□□□□□ -0.06
HDAC8-215ENST00000444609 CNTROBQ8N137 903 aa14.69□□□□□ -0.06
HDAC8-215ENST00000444609 L3MBTL3Q96JM7 780 aaPredicted RBP14.69□□□□□ -0.06
HDAC8-215ENST00000444609 SLC4A9Q96Q91 983 aa14.69□□□□□ -0.06
HDAC8-215ENST00000444609 CNTNAP4Q9C0A0 1308 aa14.68□□□□□ -0.06
HDAC8-215ENST00000444609 MAP2K2P36507 400 aa14.68□□□□□ -0.06
HDAC8-215ENST00000444609 EAPPQ56P03 285 aaPredicted RBP14.68□□□□□ -0.06
HDAC8-215ENST00000444609 SRP68Q9UHB9 627 aaKnown RBP14.68□□□□□ -0.06
HDAC8-215ENST00000444609 CLEC11AQ9Y240 323 aa14.68□□□□□ -0.06
HDAC8-215ENST00000444609 FBLN1P23142 703 aa14.67□□□□□ -0.06
HDAC8-215ENST00000444609 CYP4F22Q6NT55 531 aa14.67□□□□□ -0.06
HDAC8-215ENST00000444609 KDRP35968 1356 aa14.66□□□□□ -0.06
HDAC8-215ENST00000444609 GRM1Q13255 1194 aa14.66□□□□□ -0.06
HDAC8-215ENST00000444609 MAP1SQ66K74 1059 aaPredicted RBP14.66□□□□□ -0.06
HDAC8-215ENST00000444609 PAXIP1Q6ZW49 1069 aaPredicted RBP14.66□□□□□ -0.06
HDAC8-215ENST00000444609 MON2Q7Z3U7 1717 aa14.66□□□□□ -0.06
HDAC8-215ENST00000444609 THSD7BQ9C0I4 1608 aa14.66□□□□□ -0.06
HDAC8-215ENST00000444609 SMG6Q86US8 1419 aaKnown RBP14.66□□□□□ -0.06
HDAC8-215ENST00000444609 USP42Q9H9J4 1324 aaKnown RBP14.66□□□□□ -0.06
HDAC8-215ENST00000444609 ITGB4P16144 1822 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms