RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 SLIT3O75094 1523 aa20.15■□□□□ 0.82
PIKFYVE-206ENST00000443896 MED1Q15648 1581 aaPredicted RBP20.15■□□□□ 0.82
PIKFYVE-206ENST00000443896 CACNA1FO60840 1977 aa20.15■□□□□ 0.82
PIKFYVE-206ENST00000443896 ORAI2Q96SN7 254 aa20.15■□□□□ 0.82
PIKFYVE-206ENST00000443896 CDC45O75419 566 aa20.14■□□□□ 0.81
PIKFYVE-206ENST00000443896 TTC22Q5TAA0 569 aa20.13■□□□□ 0.81
PIKFYVE-206ENST00000443896 HMMRO75330 724 aa20.13■□□□□ 0.81
PIKFYVE-206ENST00000443896 N4BP2Q86UW6 1770 aaPredicted RBP20.12■□□□□ 0.81
PIKFYVE-206ENST00000443896 RGPD2P0DJD1 1756 aa20.12■□□□□ 0.81
PIKFYVE-206ENST00000443896 C16orf71Q8IYS4 520 aaPredicted RBP20.12■□□□□ 0.81
PIKFYVE-206ENST00000443896 NCAPD2Q15021 1401 aa20.12■□□□□ 0.81
PIKFYVE-206ENST00000443896 RRP9O43818 475 aaKnown RBP20.12■□□□□ 0.81
PIKFYVE-206ENST00000443896 GCP02774 474 aa20.12■□□□□ 0.81
PIKFYVE-206ENST00000443896 FKBP5Q13451 457 aaPredicted RBP20.12■□□□□ 0.81
PIKFYVE-206ENST00000443896 ARHGEF25Q86VW2 580 aa20.12■□□□□ 0.81
PIKFYVE-206ENST00000443896 TRPM3Q9HCF6 1732 aaPredicted RBP20.11■□□□□ 0.81
PIKFYVE-206ENST00000443896 SNX21Q969T3 373 aa20.11■□□□□ 0.81
PIKFYVE-206ENST00000443896 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
PIKFYVE-206ENST00000443896 LMO7Q8WWI1 1683 aa20.11■□□□□ 0.81
PIKFYVE-206ENST00000443896 GNAI2P04899 355 aa20.11■□□□□ 0.81
PIKFYVE-206ENST00000443896 HSCBQ8IWL3 235 aa20.1■□□□□ 0.81
PIKFYVE-206ENST00000443896 NECTIN2Q92692 538 aa20.1■□□□□ 0.81
PIKFYVE-206ENST00000443896 KIF2CQ99661 725 aa20.1■□□□□ 0.81
PIKFYVE-206ENST00000443896 RBM10P98175 930 aaKnown RBP20.09■□□□□ 0.81
PIKFYVE-206ENST00000443896 ZBTB7CA1YPR0 619 aa20.09■□□□□ 0.81
PIKFYVE-206ENST00000443896 OTUD7AQ8TE49 926 aaPredicted RBP20.09■□□□□ 0.81
PIKFYVE-206ENST00000443896 KDM3BQ7LBC6 1761 aa20.09■□□□□ 0.81
PIKFYVE-206ENST00000443896 GNAI3P08754 354 aa20.08■□□□□ 0.81
PIKFYVE-206ENST00000443896 XPCQ01831 940 aaPredicted RBP20.08■□□□□ 0.81
PIKFYVE-206ENST00000443896 LRRC59Q96AG4 307 aaKnown RBP20.08■□□□□ 0.81
PIKFYVE-206ENST00000443896 KIF1AQ12756 1690 aa20.08■□□□□ 0.81
PIKFYVE-206ENST00000443896 SMARCA5O60264 1052 aaPredicted RBP20.08■□□□□ 0.81
PIKFYVE-206ENST00000443896 LGR6Q9HBX8 967 aa20.08■□□□□ 0.81
PIKFYVE-206ENST00000443896 AKAP4Q5JQC9 854 aa20.08■□□□□ 0.8
PIKFYVE-206ENST00000443896 HDGFL1Q5TGJ6 251 aa20.08■□□□□ 0.8
PIKFYVE-206ENST00000443896 NCOA3Q9Y6Q9 1424 aa20.07■□□□□ 0.8
PIKFYVE-206ENST00000443896 XRCC6P12956 609 aaKnown RBP eCLIP20.07■□□□□ 0.8
PIKFYVE-206ENST00000443896 C1orf167Q5SNV9 1468 aa20.07■□□□□ 0.8
PIKFYVE-206ENST00000443896 EIF4A1P60842 406 aaKnown RBP20.07■□□□□ 0.8
PIKFYVE-206ENST00000443896 PROSER2Q86WR7 435 aaPredicted RBP20.07■□□□□ 0.8
PIKFYVE-206ENST00000443896 CAMTA1Q9Y6Y1 1673 aa20.07■□□□□ 0.8
PIKFYVE-206ENST00000443896 HOXB7P09629 217 aa20.07■□□□□ 0.8
PIKFYVE-206ENST00000443896 PLEKHO1Q53GL0 409 aaPredicted RBP20.07■□□□□ 0.8
PIKFYVE-206ENST00000443896 MST1RQ04912 1400 aa20.06■□□□□ 0.8
PIKFYVE-206ENST00000443896 AMOTQ4VCS5 1084 aa20.06■□□□□ 0.8
PIKFYVE-206ENST00000443896 ZNF530Q6P9A1 599 aaPredicted RBP20.05■□□□□ 0.8
PIKFYVE-206ENST00000443896 APBB1O00213 710 aa20.05■□□□□ 0.8
PIKFYVE-206ENST00000443896 KRT28Q7Z3Y7 464 aa20.05■□□□□ 0.8
PIKFYVE-206ENST00000443896 CHMP5Q9NZZ3 219 aa20.05■□□□□ 0.8
PIKFYVE-206ENST00000443896 OSBPL3Q9H4L5 887 aa20.04■□□□□ 0.8
PIKFYVE-206ENST00000443896 C19orf44Q9H6X5 657 aa20.04■□□□□ 0.8
PIKFYVE-206ENST00000443896 ANKRD24Q8TF21 1146 aa20.04■□□□□ 0.8
PIKFYVE-206ENST00000443896 OVOS2A0A0G2JMS6 1433 aa20.04■□□□□ 0.8
PIKFYVE-206ENST00000443896 SDSP20132 328 aa20.03■□□□□ 0.8
PIKFYVE-206ENST00000443896 ATP8B2P98198 1209 aa20.03■□□□□ 0.8
PIKFYVE-206ENST00000443896 PXDNQ92626 1479 aa20.03■□□□□ 0.8
PIKFYVE-206ENST00000443896 CHMP4AQ9BY43 222 aa20.03■□□□□ 0.8
PIKFYVE-206ENST00000443896 PHAXQ9H814 394 aaKnown RBP20.03■□□□□ 0.8
PIKFYVE-206ENST00000443896 LMOD2Q6P5Q4 547 aa20.02■□□□□ 0.8
PIKFYVE-206ENST00000443896 TEFQ10587 303 aa20.02■□□□□ 0.8
PIKFYVE-206ENST00000443896 USP44Q9H0E7 712 aa20.02■□□□□ 0.8
PIKFYVE-206ENST00000443896 DDIT3P35638 169 aa20.01■□□□□ 0.79
PIKFYVE-206ENST00000443896 ALS2Q96Q42 1657 aa20.01■□□□□ 0.79
PIKFYVE-206ENST00000443896 L1TD1Q5T7N2 865 aaKnown RBP20.01■□□□□ 0.79
PIKFYVE-206ENST00000443896 PNMA6EA0A0J9YXQ4 647 aa20.01■□□□□ 0.79
PIKFYVE-206ENST00000443896 EXOC6BQ9Y2D4 811 aa20.01■□□□□ 0.79
PIKFYVE-206ENST00000443896 AXIN2Q9Y2T1 843 aa20.01■□□□□ 0.79
PIKFYVE-206ENST00000443896 BTBD11A6QL63 1104 aa20■□□□□ 0.79
PIKFYVE-206ENST00000443896 RNMTO43148 476 aaKnown RBP20■□□□□ 0.79
PIKFYVE-206ENST00000443896 KCNQ3O43525 872 aa20■□□□□ 0.79
PIKFYVE-206ENST00000443896 MPRIPQ6WCQ1 1025 aa20■□□□□ 0.79
PIKFYVE-206ENST00000443896 PDE1AP54750 535 aa20■□□□□ 0.79
PIKFYVE-206ENST00000443896 LRRFIP2Q9Y608 721 aaKnown RBP20■□□□□ 0.79
PIKFYVE-206ENST00000443896 SALL3Q9BXA9 1300 aa20■□□□□ 0.79
PIKFYVE-206ENST00000443896 LMTK3Q96Q04 1460 aa20■□□□□ 0.79
PIKFYVE-206ENST00000443896 GOLGA6L3A6NEY3 463 aa20■□□□□ 0.79
PIKFYVE-206ENST00000443896 C1orf141Q5JVX7 400 aa20■□□□□ 0.79
PIKFYVE-206ENST00000443896 IBTKQ9P2D0 1353 aaPredicted RBP19.99■□□□□ 0.79
PIKFYVE-206ENST00000443896 EIF2S2P20042 333 aaKnown RBP19.99■□□□□ 0.79
PIKFYVE-206ENST00000443896 CASC1Q6TDU7 716 aa19.99■□□□□ 0.79
PIKFYVE-206ENST00000443896 LRRCC1Q9C099 1032 aa19.99■□□□□ 0.79
PIKFYVE-206ENST00000443896 USP26Q9BXU7 913 aa19.98■□□□□ 0.79
PIKFYVE-206ENST00000443896 CHPF2Q9P2E5 772 aa19.98■□□□□ 0.79
PIKFYVE-206ENST00000443896 UBTFL1P0CB47 393 aaPredicted RBP19.98■□□□□ 0.79
PIKFYVE-206ENST00000443896 CD2BP2O95400 341 aaKnown RBP19.98■□□□□ 0.79
PIKFYVE-206ENST00000443896 CLCN1P35523 988 aa19.97■□□□□ 0.79
PIKFYVE-206ENST00000443896 HSP90AB1P08238 724 aaKnown RBP19.97■□□□□ 0.79
PIKFYVE-206ENST00000443896 SRCIN1Q9C0H9 1055 aa19.97■□□□□ 0.79
PIKFYVE-206ENST00000443896 RBM42Q9BTD8 480 aaKnown RBP19.96■□□□□ 0.79
PIKFYVE-206ENST00000443896 ADAMTS7Q9UKP4 1686 aa19.96■□□□□ 0.79
PIKFYVE-206ENST00000443896 ERBB3P21860 1342 aa19.96■□□□□ 0.79
PIKFYVE-206ENST00000443896 RGPD5Q99666 1765 aa19.96■□□□□ 0.79
PIKFYVE-206ENST00000443896 K7ELQ4 463 aaPredicted RBP19.96■□□□□ 0.79
PIKFYVE-206ENST00000443896 DCCP43146 1447 aa19.96■□□□□ 0.79
PIKFYVE-206ENST00000443896 TUBGCP6Q96RT7 1819 aa19.95■□□□□ 0.78
PIKFYVE-206ENST00000443896 HEG1Q9ULI3 1381 aa19.95■□□□□ 0.78
PIKFYVE-206ENST00000443896 SSH3Q8TE77 659 aa19.95■□□□□ 0.78
PIKFYVE-206ENST00000443896 SIPA1L3O60292 1781 aaPredicted RBP19.95■□□□□ 0.78
PIKFYVE-206ENST00000443896 MCM4P33991 863 aa19.95■□□□□ 0.78
PIKFYVE-206ENST00000443896 CIZ1Q9ULV3 898 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms