RNA–Protein interactions for RNA: ENST00000443878.1

RAB5A-204, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-204ENST00000443878 ATP6V1AP38606 617 aa28.22■■■□□ 2.11
RAB5A-204ENST00000443878 SGIP1Q9BQI5 828 aa28.22■■■□□ 2.11
RAB5A-204ENST00000443878 ZEB1P37275 1124 aaPredicted RBP28.21■■■□□ 2.11
RAB5A-204ENST00000443878 MTHFSDQ2M296 383 aaKnown RBP28.21■■■□□ 2.11
RAB5A-204ENST00000443878 GAS2L2Q8NHY3 880 aa28.2■■■□□ 2.1
RAB5A-204ENST00000443878 COL24A1Q17RW2 1714 aa28.19■■■□□ 2.1
RAB5A-204ENST00000443878 MSH5O43196 834 aa28.19■■■□□ 2.1
RAB5A-204ENST00000443878 POLD1P28340 1107 aa28.19■■■□□ 2.1
RAB5A-204ENST00000443878 NFATC2IPQ8NCF5 419 aa28.19■■■□□ 2.1
RAB5A-204ENST00000443878 COL23A1Q86Y22 540 aaPredicted RBP28.18■■■□□ 2.1
RAB5A-204ENST00000443878 RNMTO43148 476 aaKnown RBP28.17■■■□□ 2.1
RAB5A-204ENST00000443878 LINC00116Q8NCU8 138 aa28.17■■■□□ 2.1
RAB5A-204ENST00000443878 ARXQ96QS3 562 aa28.17■■■□□ 2.1
RAB5A-204ENST00000443878 RBM42Q9BTD8 480 aaKnown RBP28.17■■■□□ 2.1
RAB5A-204ENST00000443878 SLC52A2Q9HAB3 445 aa28.17■■■□□ 2.1
RAB5A-204ENST00000443878 MRC1P22897 1456 aa28.16■■■□□ 2.1
RAB5A-204ENST00000443878 VIRMAQ69YN4 1812 aaKnown RBP28.16■■■□□ 2.1
RAB5A-204ENST00000443878 ITPK1Q13572 414 aa28.16■■■□□ 2.1
RAB5A-204ENST00000443878 ADAMTS7Q9UKP4 1686 aa28.16■■■□□ 2.1
RAB5A-204ENST00000443878 UBR3Q6ZT12 1888 aa28.15■■■□□ 2.1
RAB5A-204ENST00000443878 SSFA2P28290 1259 aa28.15■■■□□ 2.1
RAB5A-204ENST00000443878 U2AF1L5P0DN76 240 aaPredicted RBP28.14■■■□□ 2.1
RAB5A-204ENST00000443878 U2AF1Q01081 240 aaKnown RBP eCLIP28.14■■■□□ 2.1
RAB5A-204ENST00000443878 RSPH6AQ9H0K4 717 aa28.14■■■□□ 2.1
RAB5A-204ENST00000443878 LGR6Q9HBX8 967 aa28.14■■■□□ 2.1
RAB5A-204ENST00000443878 MAP3K5Q99683 1374 aa28.12■■■□□ 2.09
RAB5A-204ENST00000443878 DCAF8L1A6NGE4 600 aa28.12■■■□□ 2.09
RAB5A-204ENST00000443878 FCHSD2O94868 740 aa28.12■■■□□ 2.09
RAB5A-204ENST00000443878 PRKAR2BP31323 418 aa28.12■■■□□ 2.09
RAB5A-204ENST00000443878 RALBP1Q15311 655 aa28.12■■■□□ 2.09
RAB5A-204ENST00000443878 GNAT3A8MTJ3 354 aa28.11■■■□□ 2.09
RAB5A-204ENST00000443878 DDX10Q13206 875 aaKnown RBP28.11■■■□□ 2.09
RAB5A-204ENST00000443878 FHDC1Q9C0D6 1143 aaPredicted RBP28.11■■■□□ 2.09
RAB5A-204ENST00000443878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.1■■■□□ 2.09
RAB5A-204ENST00000443878 GNPATO15228 680 aa28.1■■■□□ 2.09
RAB5A-204ENST00000443878 RC3H1Q5TC82 1133 aaKnown RBP28.1■■■□□ 2.09
RAB5A-204ENST00000443878 SLC4A9Q96Q91 983 aa28.1■■■□□ 2.09
RAB5A-204ENST00000443878 COL5A3P25940 1745 aaPredicted RBP28.09■■■□□ 2.09
RAB5A-204ENST00000443878 PTCD1O75127 700 aaKnown RBP28.09■■■□□ 2.09
RAB5A-204ENST00000443878 CNTNAP4Q9C0A0 1308 aa28.09■■■□□ 2.09
RAB5A-204ENST00000443878 CICQ96RK0 1608 aaPredicted RBP28.08■■■□□ 2.09
RAB5A-204ENST00000443878 PHF14O94880 888 aa28.08■■■□□ 2.09
RAB5A-204ENST00000443878 SYT17Q9BSW7 474 aa28.08■■■□□ 2.09
RAB5A-204ENST00000443878 RTCBQ9Y3I0 505 aaKnown RBP28.07■■■□□ 2.08
RAB5A-204ENST00000443878 TEFQ10587 303 aa28.05■■■□□ 2.08
RAB5A-204ENST00000443878 PHACTR3Q96KR7 559 aa28.05■■■□□ 2.08
RAB5A-204ENST00000443878 NEFMP07197 916 aa28.04■■■□□ 2.08
RAB5A-204ENST00000443878 ADRA2BP18089 450 aa28.04■■■□□ 2.08
RAB5A-204ENST00000443878 AMIGO3Q86WK7 504 aa28.04■■■□□ 2.08
RAB5A-204ENST00000443878 RPS6KA4O75676 772 aa28.02■■■□□ 2.08
RAB5A-204ENST00000443878 TRAPPC3LQ5T215 181 aa28.02■■■□□ 2.08
RAB5A-204ENST00000443878 MSL1Q68DK7 614 aa28.02■■■□□ 2.08
RAB5A-204ENST00000443878 IL17REQ8NFR9 667 aa28.02■■■□□ 2.08
RAB5A-204ENST00000443878 PNNQ9H307 717 aaKnown RBP28.01■■■□□ 2.07
RAB5A-204ENST00000443878 TJP1Q07157 1748 aa28.01■■■□□ 2.07
RAB5A-204ENST00000443878 CEMIPQ8WUJ3 1361 aa28■■■□□ 2.07
RAB5A-204ENST00000443878 SLC39A6Q13433 755 aa28■■■□□ 2.07
RAB5A-204ENST00000443878 TTC5Q8N0Z6 440 aa28■■■□□ 2.07
RAB5A-204ENST00000443878 VSIG10Q8N0Z9 540 aa28■■■□□ 2.07
RAB5A-204ENST00000443878 CRKLP46109 303 aaKnown RBP27.99■■■□□ 2.07
RAB5A-204ENST00000443878 RTF1Q92541 710 aaKnown RBP27.99■■■□□ 2.07
RAB5A-204ENST00000443878 KCPQ6ZWJ8 1503 aa27.98■■■□□ 2.07
RAB5A-204ENST00000443878 HTATSF1O43719 755 aaKnown RBP27.98■■■□□ 2.07
RAB5A-204ENST00000443878 SMIM5Q71RC9 77 aa27.98■■■□□ 2.07
RAB5A-204ENST00000443878 MYH14Q7Z406 1995 aaKnown RBP27.98■■■□□ 2.07
RAB5A-204ENST00000443878 SIPA1L3O60292 1781 aaPredicted RBP27.98■■■□□ 2.07
RAB5A-204ENST00000443878 MYBBP1AQ9BQG0 1328 aaKnown RBP27.97■■■□□ 2.07
RAB5A-204ENST00000443878 UBR2Q8IWV8 1755 aa27.97■■■□□ 2.07
RAB5A-204ENST00000443878 KLHL34Q8N239 644 aa27.97■■■□□ 2.07
RAB5A-204ENST00000443878 RFC4P35249 363 aa27.95■■■□□ 2.06
RAB5A-204ENST00000443878 DNAJC10Q8IXB1 793 aa27.95■■■□□ 2.06
RAB5A-204ENST00000443878 ARHGEF1Q92888 912 aaKnown RBP27.95■■■□□ 2.06
RAB5A-204ENST00000443878 ZNF790Q6PG37 636 aa27.94■■■□□ 2.06
RAB5A-204ENST00000443878 NLGN1Q8N2Q7 840 aa27.93■■■□□ 2.06
RAB5A-204ENST00000443878 CCDC87Q9NVE4 849 aa27.93■■■□□ 2.06
RAB5A-204ENST00000443878 CD2APQ9Y5K6 639 aa27.92■■■□□ 2.06
RAB5A-204ENST00000443878 CYP19A1P11511 503 aaPredicted RBP27.91■■■□□ 2.06
RAB5A-204ENST00000443878 INTS5Q6P9B9 1019 aaKnown RBP27.91■■■□□ 2.06
RAB5A-204ENST00000443878 PLEKHF1Q96S99 279 aa27.91■■■□□ 2.06
RAB5A-204ENST00000443878 TEX13AQ9BXU3 409 aaPredicted RBP27.91■■■□□ 2.06
RAB5A-204ENST00000443878 BTBD11A6QL63 1104 aa27.9■■■□□ 2.06
RAB5A-204ENST00000443878 MAPK8IP3Q9UPT6 1336 aa27.9■■■□□ 2.06
RAB5A-204ENST00000443878 C4AP0C0L4 1744 aa27.89■■■□□ 2.06
RAB5A-204ENST00000443878 STARD3NLO95772 234 aa27.89■■■□□ 2.06
RAB5A-204ENST00000443878 HEG1Q9ULI3 1381 aa27.88■■■□□ 2.05
RAB5A-204ENST00000443878 MCM10Q7L590 875 aa27.88■■■□□ 2.05
RAB5A-204ENST00000443878 ZNF496Q96IT1 587 aaPredicted RBP27.88■■■□□ 2.05
RAB5A-204ENST00000443878 FMNL2Q96PY5 1086 aa27.88■■■□□ 2.05
RAB5A-204ENST00000443878 MMP10P09238 476 aa27.86■■■□□ 2.05
RAB5A-204ENST00000443878 GYS1P13807 737 aa27.86■■■□□ 2.05
RAB5A-204ENST00000443878 NFE2L2Q16236 605 aa27.86■■■□□ 2.05
RAB5A-204ENST00000443878 SOS1Q07889 1333 aaPredicted RBP27.86■■■□□ 2.05
RAB5A-204ENST00000443878 DLG5Q8TDM6 1919 aa27.85■■■□□ 2.05
RAB5A-204ENST00000443878 NLGN2Q8NFZ4 835 aa27.85■■■□□ 2.05
RAB5A-204ENST00000443878 PRKRIP1Q9H875 184 aaPredicted RBP27.85■■■□□ 2.05
RAB5A-204ENST00000443878 USP42Q9H9J4 1324 aaKnown RBP27.85■■■□□ 2.05
RAB5A-204ENST00000443878 GPR162Q16538 588 aa27.83■■■□□ 2.05
RAB5A-204ENST00000443878 ZBTB1Q9Y2K1 713 aa27.83■■■□□ 2.05
RAB5A-204ENST00000443878 ZPR1O75312 459 aa27.82■■■□□ 2.04
RAB5A-204ENST00000443878 DCTN1Q14203 1278 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms