RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 DCAF5Q96JK2 942 aa12.18□□□□□ -0.46
SMPD4P1-203ENST00000443839 SPATA31A6Q5VVP1 1343 aa12.18□□□□□ -0.46
SMPD4P1-203ENST00000443839 ZKSCAN2Q63HK3 967 aa12.17□□□□□ -0.46
SMPD4P1-203ENST00000443839 ADAMTS7Q9UKP4 1686 aa12.17□□□□□ -0.46
SMPD4P1-203ENST00000443839 SCN11AQ9UI33 1791 aa12.17□□□□□ -0.46
SMPD4P1-203ENST00000443839 KDM6AO15550 1401 aaPredicted RBP12.17□□□□□ -0.46
SMPD4P1-203ENST00000443839 NWD2Q9ULI1 1742 aa12.17□□□□□ -0.46
SMPD4P1-203ENST00000443839 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
SMPD4P1-203ENST00000443839 C8orf37Q96NL8 207 aa12.17□□□□□ -0.46
SMPD4P1-203ENST00000443839 NRAPQ86VF7 1730 aa12.16□□□□□ -0.46
SMPD4P1-203ENST00000443839 TCERG1O14776 1098 aaKnown RBP12.16□□□□□ -0.46
SMPD4P1-203ENST00000443839 IPO8O15397 1037 aaKnown RBP12.16□□□□□ -0.46
SMPD4P1-203ENST00000443839 FTSJ3Q8IY81 847 aaKnown RBP12.16□□□□□ -0.46
SMPD4P1-203ENST00000443839 DDX54Q8TDD1 881 aaKnown RBP12.16□□□□□ -0.46
SMPD4P1-203ENST00000443839 NOB1Q9ULX3 412 aaKnown RBP12.16□□□□□ -0.46
SMPD4P1-203ENST00000443839 CCDC9Q9Y3X0 531 aaKnown RBP12.16□□□□□ -0.46
SMPD4P1-203ENST00000443839 PANK1Q8TE04 598 aa12.16□□□□□ -0.46
SMPD4P1-203ENST00000443839 CLUAP1Q96AJ1 413 aa12.16□□□□□ -0.46
SMPD4P1-203ENST00000443839 SLC52A2Q9HAB3 445 aa12.16□□□□□ -0.46
SMPD4P1-203ENST00000443839 SLIT2O94813 1529 aa12.15□□□□□ -0.46
SMPD4P1-203ENST00000443839 MS4A1P11836 297 aa12.15□□□□□ -0.46
SMPD4P1-203ENST00000443839 B4GALNT3Q6L9W6 998 aa12.15□□□□□ -0.46
SMPD4P1-203ENST00000443839 ATF7IPQ6VMQ6 1270 aa12.15□□□□□ -0.46
SMPD4P1-203ENST00000443839 CCDC136Q96JN2 1154 aa12.15□□□□□ -0.46
SMPD4P1-203ENST00000443839 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
SMPD4P1-203ENST00000443839 SPATA31A1Q5TZJ5 1347 aa12.15□□□□□ -0.46
SMPD4P1-203ENST00000443839 BRPF1P55201 1214 aaPredicted RBP12.14□□□□□ -0.47
SMPD4P1-203ENST00000443839 MRPL50Q8N5N7 158 aaKnown RBP12.14□□□□□ -0.47
SMPD4P1-203ENST00000443839 NFATC2IPQ8NCF5 419 aa12.14□□□□□ -0.47
SMPD4P1-203ENST00000443839 SOS1Q07889 1333 aaPredicted RBP12.14□□□□□ -0.47
SMPD4P1-203ENST00000443839 SIPA1L3O60292 1781 aaPredicted RBP12.14□□□□□ -0.47
SMPD4P1-203ENST00000443839 DISP2A7MBM2 1401 aa12.14□□□□□ -0.47
SMPD4P1-203ENST00000443839 TRIM27P14373 513 aa12.14□□□□□ -0.47
SMPD4P1-203ENST00000443839 CABP4P57796 275 aa12.14□□□□□ -0.47
SMPD4P1-203ENST00000443839 DZIP1LQ8IYY4 767 aaKnown RBP12.14□□□□□ -0.47
SMPD4P1-203ENST00000443839 SHANK3Q9BYB0 1731 aa12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 EIF4A1P60842 406 aaKnown RBP12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 MEX3CQ5U5Q3 659 aaKnown RBP12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 UNC5CLQ8IV45 518 aa12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 CDCA7Q9BWT1 371 aaPredicted RBP12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 RNF216Q9NWF9 866 aaPredicted RBP12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 TNNQ9UQP3 1299 aa12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 COG6Q9Y2V7 657 aa12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 THRAP3Q9Y2W1 955 aaKnown RBP12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 LRP6O75581 1613 aa12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 KCNQ3O43525 872 aa12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 RLBP1P12271 317 aa12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 STK31Q9BXU1 1019 aa12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 MRC1P22897 1456 aa12.13□□□□□ -0.47
SMPD4P1-203ENST00000443839 SPATA31A5Q5VU36 1347 aa12.12□□□□□ -0.47
SMPD4P1-203ENST00000443839 SPATA31A7Q8IWB4 1347 aa12.12□□□□□ -0.47
SMPD4P1-203ENST00000443839 EXOC5O00471 708 aa12.12□□□□□ -0.47
SMPD4P1-203ENST00000443839 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
SMPD4P1-203ENST00000443839 CCDC30Q5VVM6 783 aa12.12□□□□□ -0.47
SMPD4P1-203ENST00000443839 WNK3Q9BYP7 1800 aa12.12□□□□□ -0.47
SMPD4P1-203ENST00000443839 ARHGAP45Q92619 1136 aa12.11□□□□□ -0.47
SMPD4P1-203ENST00000443839 NECTIN2Q92692 538 aa12.11□□□□□ -0.47
SMPD4P1-203ENST00000443839 TSHZ2Q9NRE2 1034 aa12.11□□□□□ -0.47
SMPD4P1-203ENST00000443839 ERVV-2B6SEH9 535 aa12.11□□□□□ -0.47
SMPD4P1-203ENST00000443839 SLC4A2P04920 1241 aa12.11□□□□□ -0.47
SMPD4P1-203ENST00000443839 HOXB7P09629 217 aa12.11□□□□□ -0.47
SMPD4P1-203ENST00000443839 HDGFL1Q5TGJ6 251 aa12.11□□□□□ -0.47
SMPD4P1-203ENST00000443839 ZNF790Q6PG37 636 aa12.11□□□□□ -0.47
SMPD4P1-203ENST00000443839 TTC5Q8N0Z6 440 aa12.11□□□□□ -0.47
SMPD4P1-203ENST00000443839 FNBP4Q8N3X1 1017 aaPredicted RBP12.11□□□□□ -0.47
SMPD4P1-203ENST00000443839 CHMP4AQ9BY43 222 aa12.11□□□□□ -0.47
SMPD4P1-203ENST00000443839 BCL9LQ86UU0 1499 aa12.11□□□□□ -0.47
SMPD4P1-203ENST00000443839 SLC39A6Q13433 755 aa12.1□□□□□ -0.47
SMPD4P1-203ENST00000443839 USP21Q9UK80 565 aa12.1□□□□□ -0.47
SMPD4P1-203ENST00000443839 TNS2Q63HR2 1409 aa12.1□□□□□ -0.47
SMPD4P1-203ENST00000443839 MVPQ14764 893 aaKnown RBP12.1□□□□□ -0.47
SMPD4P1-203ENST00000443839 DDB1Q16531 1140 aa12.1□□□□□ -0.47
SMPD4P1-203ENST00000443839 ITPRIPQ8IWB1 547 aa12.1□□□□□ -0.47
SMPD4P1-203ENST00000443839 API5Q9BZZ5 524 aaKnown RBP12.1□□□□□ -0.47
SMPD4P1-203ENST00000443839 EIF2S2P20042 333 aaKnown RBP12.09□□□□□ -0.47
SMPD4P1-203ENST00000443839 VPS72Q15906 364 aa12.09□□□□□ -0.47
SMPD4P1-203ENST00000443839 BARGINQ6ZT62 677 aa12.09□□□□□ -0.47
SMPD4P1-203ENST00000443839 KAT6BQ8WYB5 2073 aa12.09□□□□□ -0.47
SMPD4P1-203ENST00000443839 PTPRCP08575 1304 aa12.08□□□□□ -0.47
SMPD4P1-203ENST00000443839 GIGYF1O75420 1035 aaPredicted RBP12.08□□□□□ -0.47
SMPD4P1-203ENST00000443839 CACNA1FO60840 1977 aa12.08□□□□□ -0.48
SMPD4P1-203ENST00000443839 TMEM57Q8N5G2 664 aa12.08□□□□□ -0.48
SMPD4P1-203ENST00000443839 DDX19BQ9UMR2 479 aa12.08□□□□□ -0.48
SMPD4P1-203ENST00000443839 HEG1Q9ULI3 1381 aa12.07□□□□□ -0.48
SMPD4P1-203ENST00000443839 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
SMPD4P1-203ENST00000443839 TMOD3Q9NYL9 352 aa12.07□□□□□ -0.48
SMPD4P1-203ENST00000443839 AAMPQ13685 434 aa12.07□□□□□ -0.48
SMPD4P1-203ENST00000443839 ZNF496Q96IT1 587 aaPredicted RBP12.07□□□□□ -0.48
SMPD4P1-203ENST00000443839 FMNL2Q96PY5 1086 aa12.07□□□□□ -0.48
SMPD4P1-203ENST00000443839 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.06□□□□□ -0.48
SMPD4P1-203ENST00000443839 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
SMPD4P1-203ENST00000443839 ABCC4O15439 1325 aa12.06□□□□□ -0.48
SMPD4P1-203ENST00000443839 AFF2P51816 1311 aa12.06□□□□□ -0.48
SMPD4P1-203ENST00000443839 A0A0G2JS52 829 aa12.06□□□□□ -0.48
SMPD4P1-203ENST00000443839 FLIIQ13045 1269 aa12.05□□□□□ -0.48
SMPD4P1-203ENST00000443839 FKBP5Q13451 457 aaPredicted RBP12.05□□□□□ -0.48
SMPD4P1-203ENST00000443839 G2E3Q7L622 706 aa12.05□□□□□ -0.48
SMPD4P1-203ENST00000443839 CHPF2Q9P2E5 772 aa12.05□□□□□ -0.48
SMPD4P1-203ENST00000443839 PRAMEF22A3QJZ6 481 aa12.05□□□□□ -0.48
SMPD4P1-203ENST00000443839 SNRPA1P09661 255 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms