RNA–Protein interactions for RNA: ENST00000443796.5

EPHA4-209, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 584 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-209ENST00000443796 LRRC59Q96AG4 307 aaKnown RBP10.7□□□□□ -0.7
EPHA4-209ENST00000443796 RIMS2Q9UQ26 1411 aa10.69□□□□□ -0.7
EPHA4-209ENST00000443796 PPP1R15AO75807 674 aaPredicted RBP10.69□□□□□ -0.7
EPHA4-209ENST00000443796 ADAMTS2O95450 1211 aa10.69□□□□□ -0.7
EPHA4-209ENST00000443796 CCDC125Q86Z20 511 aa10.69□□□□□ -0.7
EPHA4-209ENST00000443796 DDX17Q92841 729 aaKnown RBP10.69□□□□□ -0.7
EPHA4-209ENST00000443796 RRP7BPQ9NSQ0 103 aa10.69□□□□□ -0.7
EPHA4-209ENST00000443796 SLC52A1Q9NWF4 448 aa10.69□□□□□ -0.7
EPHA4-209ENST00000443796 LRP5O75197 1615 aa10.69□□□□□ -0.7
EPHA4-209ENST00000443796 KANK1Q14678 1352 aa10.68□□□□□ -0.7
EPHA4-209ENST00000443796 RNF19BQ6ZMZ0 732 aa10.68□□□□□ -0.7
EPHA4-209ENST00000443796 CABLES1Q8TDN4 633 aa10.68□□□□□ -0.7
EPHA4-209ENST00000443796 ZBTB3Q9H5J0 574 aa10.68□□□□□ -0.7
EPHA4-209ENST00000443796 DCCP43146 1447 aa10.67□□□□□ -0.7
EPHA4-209ENST00000443796 MST1RQ04912 1400 aa10.67□□□□□ -0.7
EPHA4-209ENST00000443796 TLL1O43897 1013 aa10.67□□□□□ -0.7
EPHA4-209ENST00000443796 MTMR2Q13614 643 aa10.67□□□□□ -0.7
EPHA4-209ENST00000443796 BRICD5Q6PL45 260 aa10.67□□□□□ -0.7
EPHA4-209ENST00000443796 SPSB2Q99619 263 aa10.67□□□□□ -0.7
EPHA4-209ENST00000443796 USP21Q9UK80 565 aa10.67□□□□□ -0.7
EPHA4-209ENST00000443796 TRPC5Q9UL62 973 aaPredicted RBP10.67□□□□□ -0.7
EPHA4-209ENST00000443796 ATRNO75882 1429 aa10.67□□□□□ -0.7
EPHA4-209ENST00000443796 PTPRUQ92729 1446 aa10.67□□□□□ -0.7
EPHA4-209ENST00000443796 GCC2Q8IWJ2 1684 aa10.66□□□□□ -0.7
EPHA4-209ENST00000443796 PIK3R4Q99570 1358 aa10.66□□□□□ -0.7
EPHA4-209ENST00000443796 HRCP23327 699 aa10.66□□□□□ -0.7
EPHA4-209ENST00000443796 QPCTQ16769 361 aa10.66□□□□□ -0.7
EPHA4-209ENST00000443796 TUSC1Q2TAM9 212 aa10.66□□□□□ -0.7
EPHA4-209ENST00000443796 SALL2Q9Y467 1007 aaPredicted RBP10.66□□□□□ -0.7
EPHA4-209ENST00000443796 MYOM3Q5VTT5 1437 aa10.66□□□□□ -0.7
EPHA4-209ENST00000443796 TMEM131LA2VDJ0 1609 aa10.66□□□□□ -0.7
EPHA4-209ENST00000443796 ITGBL1O95965 494 aaPredicted RBP10.65□□□□□ -0.7
EPHA4-209ENST00000443796 PRPF38BQ5VTL8 546 aaKnown RBP10.65□□□□□ -0.7
EPHA4-209ENST00000443796 FNBP4Q8N3X1 1017 aaPredicted RBP10.65□□□□□ -0.7
EPHA4-209ENST00000443796 NKX2-3Q8TAU0 364 aa10.65□□□□□ -0.7
EPHA4-209ENST00000443796 THAP11Q96EK4 314 aa10.65□□□□□ -0.7
EPHA4-209ENST00000443796 USB1Q9BQ65 265 aaKnown RBP10.65□□□□□ -0.7
EPHA4-209ENST00000443796 AMOTL2Q9Y2J4 779 aa10.65□□□□□ -0.7
EPHA4-209ENST00000443796 LILRB3O75022 631 aa10.64□□□□□ -0.71
EPHA4-209ENST00000443796 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.64□□□□□ -0.71
EPHA4-209ENST00000443796 ABCC5O15440 1437 aa10.64□□□□□ -0.71
EPHA4-209ENST00000443796 CROCC2H7BZ55 1655 aa10.63□□□□□ -0.71
EPHA4-209ENST00000443796 SPDYE5A6NIY4 337 aa10.63□□□□□ -0.71
EPHA4-209ENST00000443796 ADH1BP00325 375 aa10.63□□□□□ -0.71
EPHA4-209ENST00000443796 RTL5Q5HYW3 569 aaPredicted RBP10.63□□□□□ -0.71
EPHA4-209ENST00000443796 DEFB132Q7Z7B7 95 aa10.63□□□□□ -0.71
EPHA4-209ENST00000443796 RETREG3Q86VR2 466 aa10.63□□□□□ -0.71
EPHA4-209ENST00000443796 TSC1Q92574 1164 aa10.63□□□□□ -0.71
EPHA4-209ENST00000443796 TRPM2O94759 1503 aa10.63□□□□□ -0.71
EPHA4-209ENST00000443796 BLMP54132 1417 aaPredicted RBP10.62□□□□□ -0.71
EPHA4-209ENST00000443796 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.62□□□□□ -0.71
EPHA4-209ENST00000443796 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
EPHA4-209ENST00000443796 PTCH1Q13635 1447 aa10.61□□□□□ -0.71
EPHA4-209ENST00000443796 PRR7Q8TB68 274 aa10.61□□□□□ -0.71
EPHA4-209ENST00000443796 XRN1Q8IZH2 1706 aaKnown RBP10.61□□□□□ -0.71
EPHA4-209ENST00000443796 BCL9LQ86UU0 1499 aa10.61□□□□□ -0.71
EPHA4-209ENST00000443796 SLC6A16Q9GZN6 736 aa10.6□□□□□ -0.71
EPHA4-209ENST00000443796 RPRD2Q5VT52 1461 aaKnown RBP10.6□□□□□ -0.71
EPHA4-209ENST00000443796 LAMC1P11047 1609 aa10.59□□□□□ -0.71
EPHA4-209ENST00000443796 FAM160A2Q8N612 972 aaPredicted RBP10.59□□□□□ -0.71
EPHA4-209ENST00000443796 UNC13BO14795 1591 aa10.59□□□□□ -0.71
EPHA4-209ENST00000443796 SOS2Q07890 1332 aaPredicted RBP10.58□□□□□ -0.71
EPHA4-209ENST00000443796 RFC5P40937 340 aa10.58□□□□□ -0.72
EPHA4-209ENST00000443796 PPP2R2DQ66LE6 453 aa10.58□□□□□ -0.72
EPHA4-209ENST00000443796 GJD4Q96KN9 370 aaPredicted RBP10.58□□□□□ -0.72
EPHA4-209ENST00000443796 COL22A1Q8NFW1 1626 aaPredicted RBP10.58□□□□□ -0.72
EPHA4-209ENST00000443796 DAPK1P53355 1430 aa10.58□□□□□ -0.72
EPHA4-209ENST00000443796 ADGRL3Q9HAR2 1447 aa10.58□□□□□ -0.72
EPHA4-209ENST00000443796 C1orf167Q5SNV9 1468 aa10.57□□□□□ -0.72
EPHA4-209ENST00000443796 CFAP99D6REC4 459 aa10.57□□□□□ -0.72
EPHA4-209ENST00000443796 MSS51Q4VC12 460 aa10.57□□□□□ -0.72
EPHA4-209ENST00000443796 KANK4Q5T7N3 995 aaPredicted RBP10.57□□□□□ -0.72
EPHA4-209ENST00000443796 NALCNQ8IZF0 1738 aa10.57□□□□□ -0.72
EPHA4-209ENST00000443796 NRXN3Q9Y4C0 1643 aa10.57□□□□□ -0.72
EPHA4-209ENST00000443796 BRWD3Q6RI45 1802 aa10.56□□□□□ -0.72
EPHA4-209ENST00000443796 MYOM2P54296 1465 aa10.56□□□□□ -0.72
EPHA4-209ENST00000443796 AP1G2O75843 785 aa10.56□□□□□ -0.72
EPHA4-209ENST00000443796 S1PR4O95977 384 aa10.56□□□□□ -0.72
EPHA4-209ENST00000443796 HELBQ8NG08 1087 aaPredicted RBP10.56□□□□□ -0.72
EPHA4-209ENST00000443796 PRDM9Q9NQV7 894 aa10.56□□□□□ -0.72
EPHA4-209ENST00000443796 CHIC2Q9UKJ5 165 aa10.56□□□□□ -0.72
EPHA4-209ENST00000443796 GLI3P10071 1580 aa10.56□□□□□ -0.72
EPHA4-209ENST00000443796 ANKRD30AQ9BXX3 1397 aa10.55□□□□□ -0.72
EPHA4-209ENST00000443796 GGCXP38435 758 aa10.55□□□□□ -0.72
EPHA4-209ENST00000443796 ORAI2Q96SN7 254 aa10.55□□□□□ -0.72
EPHA4-209ENST00000443796 MARF1Q9Y4F3 1742 aaKnown RBP10.55□□□□□ -0.72
EPHA4-209ENST00000443796 RALGAPBQ86X10 1494 aa10.55□□□□□ -0.72
EPHA4-209ENST00000443796 PTPN23Q9H3S7 1636 aa10.55□□□□□ -0.72
EPHA4-209ENST00000443796 METP08581 1390 aa10.54□□□□□ -0.72
EPHA4-209ENST00000443796 JUNDP17535 347 aa10.54□□□□□ -0.72
EPHA4-209ENST00000443796 TMEM259Q4ZIN3 620 aa10.54□□□□□ -0.72
EPHA4-209ENST00000443796 YY1P25490 414 aa10.53□□□□□ -0.72
EPHA4-209ENST00000443796 SF3B2Q13435 895 aaKnown RBP10.53□□□□□ -0.72
EPHA4-209ENST00000443796 SPHKAPQ2M3C7 1700 aa10.53□□□□□ -0.72
EPHA4-209ENST00000443796 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.53□□□□□ -0.72
EPHA4-209ENST00000443796 CTDSPL2Q05D32 466 aa10.52□□□□□ -0.73
EPHA4-209ENST00000443796 PPP1R18Q6NYC8 613 aa10.52□□□□□ -0.73
EPHA4-209ENST00000443796 PPEF1O14829 653 aaPredicted RBP10.51□□□□□ -0.73
EPHA4-209ENST00000443796 DXOO77932 396 aaKnown RBP10.51□□□□□ -0.73
EPHA4-209ENST00000443796 MMP16P51512 607 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms