RNA–Protein interactions for RNA: ENST00000443722.5

PMPCB-203, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-203ENST00000443722 POLD1P28340 1107 aa17.94■□□□□ 0.46
PMPCB-203ENST00000443722 SLC4A9Q96Q91 983 aa17.94■□□□□ 0.46
PMPCB-203ENST00000443722 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
PMPCB-203ENST00000443722 C5P01031 1676 aa17.93■□□□□ 0.46
PMPCB-203ENST00000443722 U2SURPO15042 1029 aaKnown RBP17.92■□□□□ 0.46
PMPCB-203ENST00000443722 NFATC2IPQ8NCF5 419 aa17.92■□□□□ 0.46
PMPCB-203ENST00000443722 NPC1L1Q9UHC9 1359 aa17.92■□□□□ 0.46
PMPCB-203ENST00000443722 PLEKHG2Q9H7P9 1386 aa17.91■□□□□ 0.46
PMPCB-203ENST00000443722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.91■□□□□ 0.46
PMPCB-203ENST00000443722 DCAF8L1A6NGE4 600 aa17.91■□□□□ 0.46
PMPCB-203ENST00000443722 LGR6Q9HBX8 967 aa17.91■□□□□ 0.46
PMPCB-203ENST00000443722 C4BP0C0L5 1744 aa17.9■□□□□ 0.46
PMPCB-203ENST00000443722 GNPATO15228 680 aa17.9■□□□□ 0.46
PMPCB-203ENST00000443722 PTCD1O75127 700 aaKnown RBP17.9■□□□□ 0.46
PMPCB-203ENST00000443722 QSER1Q2KHR3 1735 aa17.89■□□□□ 0.46
PMPCB-203ENST00000443722 MTHFSDQ2M296 383 aaKnown RBP17.89■□□□□ 0.45
PMPCB-203ENST00000443722 NLGN2Q8NFZ4 835 aa17.89■□□□□ 0.45
PMPCB-203ENST00000443722 COL3A1P02461 1466 aaPredicted RBP17.88■□□□□ 0.45
PMPCB-203ENST00000443722 YY1P25490 414 aa17.88■□□□□ 0.45
PMPCB-203ENST00000443722 AKAP4Q5JQC9 854 aa17.88■□□□□ 0.45
PMPCB-203ENST00000443722 TAF1LQ8IZX4 1826 aa17.88■□□□□ 0.45
PMPCB-203ENST00000443722 FLAD1Q8NFF5 587 aa17.87■□□□□ 0.45
PMPCB-203ENST00000443722 PELP1Q8IZL8 1130 aaKnown RBP17.86■□□□□ 0.45
PMPCB-203ENST00000443722 PPP2R1AP30153 589 aa17.85■□□□□ 0.45
PMPCB-203ENST00000443722 MAP3K5Q99683 1374 aa17.85■□□□□ 0.45
PMPCB-203ENST00000443722 RNMTO43148 476 aaKnown RBP17.84■□□□□ 0.45
PMPCB-203ENST00000443722 SSFA2P28290 1259 aa17.84■□□□□ 0.45
PMPCB-203ENST00000443722 SLC39A6Q13433 755 aa17.84■□□□□ 0.45
PMPCB-203ENST00000443722 HMGB2P26583 209 aaKnown RBP17.83■□□□□ 0.44
PMPCB-203ENST00000443722 GPR162Q16538 588 aa17.83■□□□□ 0.44
PMPCB-203ENST00000443722 SLC52A2Q9HAB3 445 aa17.83■□□□□ 0.44
PMPCB-203ENST00000443722 UBR3Q6ZT12 1888 aa17.82■□□□□ 0.44
PMPCB-203ENST00000443722 PHACTR3Q96KR7 559 aa17.81■□□□□ 0.44
PMPCB-203ENST00000443722 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
PMPCB-203ENST00000443722 RTCBQ9Y3I0 505 aaKnown RBP17.81■□□□□ 0.44
PMPCB-203ENST00000443722 COL24A1Q17RW2 1714 aa17.81■□□□□ 0.44
PMPCB-203ENST00000443722 TRAPPC3LQ5T215 181 aa17.8■□□□□ 0.44
PMPCB-203ENST00000443722 ARHGEF1Q92888 912 aaKnown RBP17.8■□□□□ 0.44
PMPCB-203ENST00000443722 WWC3Q9ULE0 1092 aa17.8■□□□□ 0.44
PMPCB-203ENST00000443722 PRKAR2BP31323 418 aa17.79■□□□□ 0.44
PMPCB-203ENST00000443722 CRKLP46109 303 aaKnown RBP17.79■□□□□ 0.44
PMPCB-203ENST00000443722 DNAJC10Q8IXB1 793 aa17.79■□□□□ 0.44
PMPCB-203ENST00000443722 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
PMPCB-203ENST00000443722 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
PMPCB-203ENST00000443722 RC3H1Q5TC82 1133 aaKnown RBP17.78■□□□□ 0.44
PMPCB-203ENST00000443722 IL17REQ8NFR9 667 aa17.78■□□□□ 0.44
PMPCB-203ENST00000443722 RSPH6AQ9H0K4 717 aa17.78■□□□□ 0.44
PMPCB-203ENST00000443722 CNTNAP4Q9C0A0 1308 aa17.78■□□□□ 0.44
PMPCB-203ENST00000443722 RPS6KA4O75676 772 aa17.77■□□□□ 0.44
PMPCB-203ENST00000443722 YBX3P16989 372 aaKnown RBP eCLIP17.77■□□□□ 0.44
PMPCB-203ENST00000443722 SCN11AQ9UI33 1791 aa17.76■□□□□ 0.43
PMPCB-203ENST00000443722 MMP10P09238 476 aa17.76■□□□□ 0.43
PMPCB-203ENST00000443722 SRP68Q9UHB9 627 aaKnown RBP17.76■□□□□ 0.43
PMPCB-203ENST00000443722 GNAT3A8MTJ3 354 aa17.75■□□□□ 0.43
PMPCB-203ENST00000443722 RFC4P35249 363 aa17.75■□□□□ 0.43
PMPCB-203ENST00000443722 INTS5Q6P9B9 1019 aaKnown RBP17.75■□□□□ 0.43
PMPCB-203ENST00000443722 GAS2L2Q8NHY3 880 aa17.75■□□□□ 0.43
PMPCB-203ENST00000443722 NUDCQ9Y266 331 aa17.75■□□□□ 0.43
PMPCB-203ENST00000443722 CD2APQ9Y5K6 639 aa17.75■□□□□ 0.43
PMPCB-203ENST00000443722 MRC1P22897 1456 aa17.75■□□□□ 0.43
PMPCB-203ENST00000443722 GYS1P13807 737 aa17.73■□□□□ 0.43
PMPCB-203ENST00000443722 COL5A3P25940 1745 aaPredicted RBP17.73■□□□□ 0.43
PMPCB-203ENST00000443722 MYH14Q7Z406 1995 aaKnown RBP17.73■□□□□ 0.43
PMPCB-203ENST00000443722 CYP19A1P11511 503 aaPredicted RBP17.72■□□□□ 0.43
PMPCB-203ENST00000443722 ADRA2BP18089 450 aa17.72■□□□□ 0.43
PMPCB-203ENST00000443722 TEFQ10587 303 aa17.72■□□□□ 0.43
PMPCB-203ENST00000443722 DDX10Q13206 875 aaKnown RBP17.72■□□□□ 0.43
PMPCB-203ENST00000443722 ZNF831Q5JPB2 1677 aa17.72■□□□□ 0.43
PMPCB-203ENST00000443722 TJP1Q07157 1748 aa17.72■□□□□ 0.43
PMPCB-203ENST00000443722 KCPQ6ZWJ8 1503 aa17.72■□□□□ 0.43
PMPCB-203ENST00000443722 CCDC87Q9NVE4 849 aa17.72■□□□□ 0.43
PMPCB-203ENST00000443722 KCNQ3O43525 872 aa17.71■□□□□ 0.42
PMPCB-203ENST00000443722 FKBP8Q14318 412 aa17.71■□□□□ 0.42
PMPCB-203ENST00000443722 TTC5Q8N0Z6 440 aa17.71■□□□□ 0.42
PMPCB-203ENST00000443722 NLGN1Q8N2Q7 840 aa17.71■□□□□ 0.42
PMPCB-203ENST00000443722 ZNF496Q96IT1 587 aaPredicted RBP17.71■□□□□ 0.42
PMPCB-203ENST00000443722 ZBTB1Q9Y2K1 713 aa17.71■□□□□ 0.42
PMPCB-203ENST00000443722 ADAMTS7Q9UKP4 1686 aa17.7■□□□□ 0.42
PMPCB-203ENST00000443722 DCTN1Q14203 1278 aa17.7■□□□□ 0.42
PMPCB-203ENST00000443722 MCM10Q7L590 875 aa17.7■□□□□ 0.42
PMPCB-203ENST00000443722 ZNF784Q8NCA9 323 aaPredicted RBP17.7■□□□□ 0.42
PMPCB-203ENST00000443722 FCHSD2O94868 740 aa17.69■□□□□ 0.42
PMPCB-203ENST00000443722 CANXP27824 592 aaKnown RBP17.69■□□□□ 0.42
PMPCB-203ENST00000443722 ZNF790Q6PG37 636 aa17.69■□□□□ 0.42
PMPCB-203ENST00000443722 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
PMPCB-203ENST00000443722 SOS1Q07889 1333 aaPredicted RBP17.68■□□□□ 0.42
PMPCB-203ENST00000443722 CICQ96RK0 1608 aaPredicted RBP17.67■□□□□ 0.42
PMPCB-203ENST00000443722 USPL1Q5W0Q7 1092 aa17.67■□□□□ 0.42
PMPCB-203ENST00000443722 CEMIPQ8WUJ3 1361 aa17.67■□□□□ 0.42
PMPCB-203ENST00000443722 PARP3Q9Y6F1 533 aa17.67■□□□□ 0.42
PMPCB-203ENST00000443722 A0A0G2JLW4 131 aa17.66■□□□□ 0.42
PMPCB-203ENST00000443722 BTBD11A6QL63 1104 aa17.66■□□□□ 0.42
PMPCB-203ENST00000443722 GRIN3BO60391 1043 aa17.66■□□□□ 0.42
PMPCB-203ENST00000443722 DDR1Q08345 913 aa17.66■□□□□ 0.42
PMPCB-203ENST00000443722 VSIG10Q8N0Z9 540 aa17.66■□□□□ 0.42
PMPCB-203ENST00000443722 VIRMAQ69YN4 1812 aaKnown RBP17.65■□□□□ 0.42
PMPCB-203ENST00000443722 C4AP0C0L4 1744 aa17.65■□□□□ 0.42
PMPCB-203ENST00000443722 ZPR1O75312 459 aa17.65■□□□□ 0.42
PMPCB-203ENST00000443722 RTF1Q92541 710 aaKnown RBP17.65■□□□□ 0.42
PMPCB-203ENST00000443722 HEG1Q9ULI3 1381 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms