RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 SLC4A9Q96Q91 983 aa17.16■□□□□ 0.34
PDLIM2-212ENST00000443561 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
PDLIM2-212ENST00000443561 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
PDLIM2-212ENST00000443561 MYH14Q7Z406 1995 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-212ENST00000443561 SRCAPQ6ZRS2 3230 aa17.15■□□□□ 0.34
PDLIM2-212ENST00000443561 HSP90AB1P08238 724 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-212ENST00000443561 ZNF827Q17R98 1081 aa17.14■□□□□ 0.33
PDLIM2-212ENST00000443561 GAS2L2Q8NHY3 880 aa17.14■□□□□ 0.33
PDLIM2-212ENST00000443561 TMOD3Q9NYL9 352 aa17.14■□□□□ 0.33
PDLIM2-212ENST00000443561 ADAMTS8Q9UP79 889 aa17.14■□□□□ 0.33
PDLIM2-212ENST00000443561 PSDA5PKW4 1024 aaPredicted RBP17.13■□□□□ 0.33
PDLIM2-212ENST00000443561 SLC52A2Q9HAB3 445 aa17.13■□□□□ 0.33
PDLIM2-212ENST00000443561 GNAT3A8MTJ3 354 aa17.12■□□□□ 0.33
PDLIM2-212ENST00000443561 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
PDLIM2-212ENST00000443561 CCDC146Q8IYE0 955 aa17.12■□□□□ 0.33
PDLIM2-212ENST00000443561 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
PDLIM2-212ENST00000443561 PDGFDQ9GZP0 370 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-212ENST00000443561 COL24A1Q17RW2 1714 aa17.12■□□□□ 0.33
PDLIM2-212ENST00000443561 ANP32CO43423 234 aa17.11■□□□□ 0.33
PDLIM2-212ENST00000443561 ITPK1Q13572 414 aa17.11■□□□□ 0.33
PDLIM2-212ENST00000443561 R3HDM1Q15032 1099 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-212ENST00000443561 AMIGO3Q86WK7 504 aa17.11■□□□□ 0.33
PDLIM2-212ENST00000443561 AKT1S1Q96B36 256 aa17.11■□□□□ 0.33
PDLIM2-212ENST00000443561 CABP4P57796 275 aa17.1■□□□□ 0.33
PDLIM2-212ENST00000443561 NFE2L2Q16236 605 aa17.1■□□□□ 0.33
PDLIM2-212ENST00000443561 MCM10Q7L590 875 aa17.1■□□□□ 0.33
PDLIM2-212ENST00000443561 LRP5O75197 1615 aa17.1■□□□□ 0.33
PDLIM2-212ENST00000443561 SLC39A6Q13433 755 aa17.09■□□□□ 0.33
PDLIM2-212ENST00000443561 SLC27A3Q5K4L6 730 aa17.09■□□□□ 0.33
PDLIM2-212ENST00000443561 PNISRQ8TF01 805 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-212ENST00000443561 CCNL1Q9UK58 526 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-212ENST00000443561 C4AP0C0L4 1744 aa17.08■□□□□ 0.32
PDLIM2-212ENST00000443561 LOC102724428A0A0B4J2F2 783 aa17.08■□□□□ 0.32
PDLIM2-212ENST00000443561 SIK1P57059 783 aa17.08■□□□□ 0.32
PDLIM2-212ENST00000443561 LINC00116Q8NCU8 138 aa17.08■□□□□ 0.32
PDLIM2-212ENST00000443561 THUMPD2Q9BTF0 503 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-212ENST00000443561 KCNQ3O43525 872 aa17.07■□□□□ 0.32
PDLIM2-212ENST00000443561 SMARCC1Q92922 1105 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-212ENST00000443561 TMPOP42166 694 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-212ENST00000443561 SLC15A2Q16348 729 aa17.06■□□□□ 0.32
PDLIM2-212ENST00000443561 SMIM5Q71RC9 77 aa17.06■□□□□ 0.32
PDLIM2-212ENST00000443561 RRP7AQ9Y3A4 280 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-212ENST00000443561 PNPLA7Q6ZV29 1317 aa17.05■□□□□ 0.32
PDLIM2-212ENST00000443561 WDR43Q15061 677 aaKnown RBP eCLIP17.05■□□□□ 0.32
PDLIM2-212ENST00000443561 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
PDLIM2-212ENST00000443561 MRS2Q9HD23 443 aa17.05■□□□□ 0.32
PDLIM2-212ENST00000443561 TRIM35Q9UPQ4 493 aa17.05■□□□□ 0.32
PDLIM2-212ENST00000443561 LAMB4A4D0S4 1761 aa17.05■□□□□ 0.32
PDLIM2-212ENST00000443561 HTATSF1O43719 755 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-212ENST00000443561 PTCD1O75127 700 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-212ENST00000443561 MAPK8IP3Q9UPT6 1336 aa17.02■□□□□ 0.32
PDLIM2-212ENST00000443561 SENP3-EIF4A1A0A087X0R7 540 aa17.01■□□□□ 0.31
PDLIM2-212ENST00000443561 ATP6V1AP38606 617 aa17.01■□□□□ 0.31
PDLIM2-212ENST00000443561 NBPF14Q5TI25 921 aa17.01■□□□□ 0.31
PDLIM2-212ENST00000443561 ZNF496Q96IT1 587 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-212ENST00000443561 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-212ENST00000443561 STK32BQ9NY57 414 aa17.01■□□□□ 0.31
PDLIM2-212ENST00000443561 RIPK4P57078 832 aa17■□□□□ 0.31
PDLIM2-212ENST00000443561 TEFQ10587 303 aa17■□□□□ 0.31
PDLIM2-212ENST00000443561 ZNF790Q6PG37 636 aa17■□□□□ 0.31
PDLIM2-212ENST00000443561 APAF1O14727 1248 aa16.99■□□□□ 0.31
PDLIM2-212ENST00000443561 DNAJC10Q8IXB1 793 aa16.99■□□□□ 0.31
PDLIM2-212ENST00000443561 PNNQ9H307 717 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-212ENST00000443561 MIS18AQ9NYP9 233 aa16.99■□□□□ 0.31
PDLIM2-212ENST00000443561 HEG1Q9ULI3 1381 aa16.99■□□□□ 0.31
PDLIM2-212ENST00000443561 PRAMEF22A3QJZ6 481 aa16.98■□□□□ 0.31
PDLIM2-212ENST00000443561 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-212ENST00000443561 CNTNAP4Q9C0A0 1308 aa16.97■□□□□ 0.31
PDLIM2-212ENST00000443561 NEUROD2Q15784 382 aa16.97■□□□□ 0.31
PDLIM2-212ENST00000443561 COL23A1Q86Y22 540 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-212ENST00000443561 BTBD11A6QL63 1104 aa16.96■□□□□ 0.31
PDLIM2-212ENST00000443561 CYP19A1P11511 503 aaPredicted RBP16.96■□□□□ 0.31
PDLIM2-212ENST00000443561 INTS5Q6P9B9 1019 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-212ENST00000443561 SGIP1Q9BQI5 828 aa16.96■□□□□ 0.31
PDLIM2-212ENST00000443561 NEFMP07197 916 aa16.95■□□□□ 0.3
PDLIM2-212ENST00000443561 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-212ENST00000443561 TAF7Q15545 349 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-212ENST00000443561 DIEXFQ68CQ4 756 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-212ENST00000443561 MIER1Q8N108 512 aa16.95■□□□□ 0.3
PDLIM2-212ENST00000443561 BCORQ6W2J9 1755 aa16.94■□□□□ 0.3
PDLIM2-212ENST00000443561 SCN7AQ01118 1682 aa16.94■□□□□ 0.3
PDLIM2-212ENST00000443561 ZBTB7AO95365 584 aa16.94■□□□□ 0.3
PDLIM2-212ENST00000443561 PTGER2P43116 358 aa16.94■□□□□ 0.3
PDLIM2-212ENST00000443561 GNPATO15228 680 aa16.93■□□□□ 0.3
PDLIM2-212ENST00000443561 RC3H1Q5TC82 1133 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-212ENST00000443561 VSIG10Q8N0Z9 540 aa16.93■□□□□ 0.3
PDLIM2-212ENST00000443561 TFCP2L1Q9NZI6 479 aa16.93■□□□□ 0.3
PDLIM2-212ENST00000443561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-212ENST00000443561 EIF4A1P60842 406 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-212ENST00000443561 AK7Q96M32 723 aa16.92■□□□□ 0.3
PDLIM2-212ENST00000443561 ZBTB1Q9Y2K1 713 aa16.92■□□□□ 0.3
PDLIM2-212ENST00000443561 CCER2I3L3R5 266 aa16.91■□□□□ 0.3
PDLIM2-212ENST00000443561 PHF14O94880 888 aa16.91■□□□□ 0.3
PDLIM2-212ENST00000443561 ZNF853P0CG23 659 aa16.91■□□□□ 0.3
PDLIM2-212ENST00000443561 FAM9BQ8IZU0 186 aa16.91■□□□□ 0.3
PDLIM2-212ENST00000443561 TTC5Q8N0Z6 440 aa16.91■□□□□ 0.3
PDLIM2-212ENST00000443561 USP16Q9Y5T5 823 aa16.91■□□□□ 0.3
PDLIM2-212ENST00000443561 SOS1Q07889 1333 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-212ENST00000443561 CHL1O00533 1208 aa16.9■□□□□ 0.3
PDLIM2-212ENST00000443561 RPS6KA4O75676 772 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms