RNA–Protein interactions for RNA: ENST00000443289.5

ATG4C-205, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 2

Gene ATG4C, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-205ENST00000443289 MAP3K5Q99683 1374 aa21.97■■□□□ 1.11
ATG4C-205ENST00000443289 KDM6AO15550 1401 aaPredicted RBP21.97■■□□□ 1.11
ATG4C-205ENST00000443289 TAF1LQ8IZX4 1826 aa21.96■■□□□ 1.11
ATG4C-205ENST00000443289 LINC00116Q8NCU8 138 aa21.95■■□□□ 1.1
ATG4C-205ENST00000443289 C4BP0C0L5 1744 aa21.94■■□□□ 1.1
ATG4C-205ENST00000443289 ITPK1Q13572 414 aa21.94■■□□□ 1.1
ATG4C-205ENST00000443289 RBM42Q9BTD8 480 aaKnown RBP21.94■■□□□ 1.1
ATG4C-205ENST00000443289 SSFA2P28290 1259 aa21.93■■□□□ 1.1
ATG4C-205ENST00000443289 NFATC2IPQ8NCF5 419 aa21.93■■□□□ 1.1
ATG4C-205ENST00000443289 COL24A1Q17RW2 1714 aa21.92■■□□□ 1.1
ATG4C-205ENST00000443289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.92■■□□□ 1.1
ATG4C-205ENST00000443289 U2SURPO15042 1029 aaKnown RBP21.92■■□□□ 1.1
ATG4C-205ENST00000443289 CFAP53Q96M91 514 aa21.92■■□□□ 1.1
ATG4C-205ENST00000443289 PHF14O94880 888 aa21.91■■□□□ 1.1
ATG4C-205ENST00000443289 COL3A1P02461 1466 aaPredicted RBP21.9■■□□□ 1.1
ATG4C-205ENST00000443289 GNPATO15228 680 aa21.9■■□□□ 1.1
ATG4C-205ENST00000443289 DDX10Q13206 875 aaKnown RBP21.9■■□□□ 1.1
ATG4C-205ENST00000443289 MTHFSDQ2M296 383 aaKnown RBP21.9■■□□□ 1.1
ATG4C-205ENST00000443289 MSL1Q68DK7 614 aa21.9■■□□□ 1.1
ATG4C-205ENST00000443289 AMIGO3Q86WK7 504 aa21.9■■□□□ 1.1
ATG4C-205ENST00000443289 KLHL34Q8N239 644 aa21.9■■□□□ 1.1
ATG4C-205ENST00000443289 SLC4A9Q96Q91 983 aa21.9■■□□□ 1.1
ATG4C-205ENST00000443289 RC3H1Q5TC82 1133 aaKnown RBP21.89■■□□□ 1.09
ATG4C-205ENST00000443289 RNMTO43148 476 aaKnown RBP21.88■■□□□ 1.09
ATG4C-205ENST00000443289 SLC52A2Q9HAB3 445 aa21.88■■□□□ 1.09
ATG4C-205ENST00000443289 LGR6Q9HBX8 967 aa21.88■■□□□ 1.09
ATG4C-205ENST00000443289 ZNF316A6NFI3 1004 aaPredicted RBP21.87■■□□□ 1.09
ATG4C-205ENST00000443289 PTCD1O75127 700 aaKnown RBP21.87■■□□□ 1.09
ATG4C-205ENST00000443289 PPP2R1AP30153 589 aa21.87■■□□□ 1.09
ATG4C-205ENST00000443289 SMIM5Q71RC9 77 aa21.87■■□□□ 1.09
ATG4C-205ENST00000443289 NUDCQ9Y266 331 aa21.87■■□□□ 1.09
ATG4C-205ENST00000443289 ZNF831Q5JPB2 1677 aa21.86■■□□□ 1.09
ATG4C-205ENST00000443289 YY1P25490 414 aa21.86■■□□□ 1.09
ATG4C-205ENST00000443289 RTCBQ9Y3I0 505 aaKnown RBP21.86■■□□□ 1.09
ATG4C-205ENST00000443289 UBR3Q6ZT12 1888 aa21.86■■□□□ 1.09
ATG4C-205ENST00000443289 GAS2L2Q8NHY3 880 aa21.85■■□□□ 1.09
ATG4C-205ENST00000443289 CNTNAP4Q9C0A0 1308 aa21.84■■□□□ 1.09
ATG4C-205ENST00000443289 TRAPPC3LQ5T215 181 aa21.84■■□□□ 1.09
ATG4C-205ENST00000443289 SCN11AQ9UI33 1791 aa21.84■■□□□ 1.09
ATG4C-205ENST00000443289 ADRA2BP18089 450 aa21.83■■□□□ 1.09
ATG4C-205ENST00000443289 RPS6KA4O75676 772 aa21.82■■□□□ 1.08
ATG4C-205ENST00000443289 GPR162Q16538 588 aa21.82■■□□□ 1.08
ATG4C-205ENST00000443289 CD2APQ9Y5K6 639 aa21.82■■□□□ 1.08
ATG4C-205ENST00000443289 NLGN2Q8NFZ4 835 aa21.81■■□□□ 1.08
ATG4C-205ENST00000443289 MRC1P22897 1456 aa21.8■■□□□ 1.08
ATG4C-205ENST00000443289 GNAT3A8MTJ3 354 aa21.8■■□□□ 1.08
ATG4C-205ENST00000443289 U2AF1L5P0DN76 240 aaPredicted RBP21.79■■□□□ 1.08
ATG4C-205ENST00000443289 PRKAR2BP31323 418 aa21.79■■□□□ 1.08
ATG4C-205ENST00000443289 U2AF1Q01081 240 aaKnown RBP eCLIP21.79■■□□□ 1.08
ATG4C-205ENST00000443289 ARHGEF1Q92888 912 aaKnown RBP21.79■■□□□ 1.08
ATG4C-205ENST00000443289 RSPH6AQ9H0K4 717 aa21.79■■□□□ 1.08
ATG4C-205ENST00000443289 RFC4P35249 363 aa21.78■■□□□ 1.08
ATG4C-205ENST00000443289 CRKLP46109 303 aaKnown RBP21.78■■□□□ 1.08
ATG4C-205ENST00000443289 SLC39A6Q13433 755 aa21.78■■□□□ 1.08
ATG4C-205ENST00000443289 NLGN1Q8N2Q7 840 aa21.78■■□□□ 1.08
ATG4C-205ENST00000443289 FCHSD2O94868 740 aa21.77■■□□□ 1.08
ATG4C-205ENST00000443289 IL17REQ8NFR9 667 aa21.77■■□□□ 1.08
ATG4C-205ENST00000443289 PHACTR3Q96KR7 559 aa21.77■■□□□ 1.08
ATG4C-205ENST00000443289 ADAMTS7Q9UKP4 1686 aa21.76■■□□□ 1.07
ATG4C-205ENST00000443289 COL5A3P25940 1745 aaPredicted RBP21.76■■□□□ 1.07
ATG4C-205ENST00000443289 TEFQ10587 303 aa21.76■■□□□ 1.07
ATG4C-205ENST00000443289 PELP1Q8IZL8 1130 aaKnown RBP21.76■■□□□ 1.07
ATG4C-205ENST00000443289 DNAJC10Q8IXB1 793 aa21.75■■□□□ 1.07
ATG4C-205ENST00000443289 VSIG10Q8N0Z9 540 aa21.75■■□□□ 1.07
ATG4C-205ENST00000443289 MMP10P09238 476 aa21.74■■□□□ 1.07
ATG4C-205ENST00000443289 TTC5Q8N0Z6 440 aa21.74■■□□□ 1.07
ATG4C-205ENST00000443289 INTS5Q6P9B9 1019 aaKnown RBP21.73■■□□□ 1.07
ATG4C-205ENST00000443289 MYH14Q7Z406 1995 aaKnown RBP21.72■■□□□ 1.07
ATG4C-205ENST00000443289 GRIN3BO60391 1043 aa21.72■■□□□ 1.07
ATG4C-205ENST00000443289 CYP19A1P11511 503 aaPredicted RBP21.72■■□□□ 1.07
ATG4C-205ENST00000443289 GYS1P13807 737 aa21.72■■□□□ 1.07
ATG4C-205ENST00000443289 CCDC87Q9NVE4 849 aa21.72■■□□□ 1.07
ATG4C-205ENST00000443289 CICQ96RK0 1608 aaPredicted RBP21.72■■□□□ 1.07
ATG4C-205ENST00000443289 CEMIPQ8WUJ3 1361 aa21.71■■□□□ 1.07
ATG4C-205ENST00000443289 TJP1Q07157 1748 aa21.7■■□□□ 1.06
ATG4C-205ENST00000443289 ZNF790Q6PG37 636 aa21.7■■□□□ 1.06
ATG4C-205ENST00000443289 VIRMAQ69YN4 1812 aaKnown RBP21.7■■□□□ 1.06
ATG4C-205ENST00000443289 KCPQ6ZWJ8 1503 aa21.7■■□□□ 1.06
ATG4C-205ENST00000443289 RTF1Q92541 710 aaKnown RBP21.69■■□□□ 1.06
ATG4C-205ENST00000443289 STARD3NLO95772 234 aa21.68■■□□□ 1.06
ATG4C-205ENST00000443289 NEFMP07197 916 aa21.68■■□□□ 1.06
ATG4C-205ENST00000443289 YBX3P16989 372 aaKnown RBP eCLIP21.68■■□□□ 1.062e-7■■■■□ 24.3
ATG4C-205ENST00000443289 RALBP1Q15311 655 aa21.68■■□□□ 1.06
ATG4C-205ENST00000443289 TEX13AQ9BXU3 409 aaPredicted RBP21.68■■□□□ 1.06
ATG4C-205ENST00000443289 PARP3Q9Y6F1 533 aa21.68■■□□□ 1.06
ATG4C-205ENST00000443289 USP42Q9H9J4 1324 aaKnown RBP21.68■■□□□ 1.06
ATG4C-205ENST00000443289 UTRNP46939 3433 aa21.68■■□□□ 1.06
ATG4C-205ENST00000443289 SOS1Q07889 1333 aaPredicted RBP21.67■■□□□ 1.06
ATG4C-205ENST00000443289 HTATSF1O43719 755 aaKnown RBP21.67■■□□□ 1.06
ATG4C-205ENST00000443289 ZPR1O75312 459 aa21.67■■□□□ 1.06
ATG4C-205ENST00000443289 SRP68Q9UHB9 627 aaKnown RBP21.67■■□□□ 1.06
ATG4C-205ENST00000443289 BTBD11A6QL63 1104 aa21.66■■□□□ 1.06
ATG4C-205ENST00000443289 ZNF496Q96IT1 587 aaPredicted RBP21.66■■□□□ 1.06
ATG4C-205ENST00000443289 CHD4Q14839 1912 aa21.65■■□□□ 1.06
ATG4C-205ENST00000443289 TGFB2P61812 414 aa21.65■■□□□ 1.06
ATG4C-205ENST00000443289 FMNL2Q96PY5 1086 aa21.65■■□□□ 1.06
ATG4C-205ENST00000443289 PNNQ9H307 717 aaKnown RBP21.65■■□□□ 1.06
ATG4C-205ENST00000443289 ZBTB1Q9Y2K1 713 aa21.65■■□□□ 1.06
ATG4C-205ENST00000443289 HEG1Q9ULI3 1381 aa21.64■■□□□ 1.06
ATG4C-205ENST00000443289 FKBP8Q14318 412 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms