RNA–Protein interactions for RNA: ENST00000443213.5

SRSF7-208, Transcript of serine and arginine rich splicing factor 7, human

TSL 5

Gene SRSF7, Length 1,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF7-208	ENST00000443213	PCDH11X	Q9BZA7	1347 aa		13.9	□□□□□ -0.18
SRSF7-208	ENST00000443213	PCDH11Y	Q9BZA8	1340 aa		13.9	□□□□□ -0.18
SRSF7-208	ENST00000443213	THSD7A	Q9UPZ6	1657 aa		13.9	□□□□□ -0.18
SRSF7-208	ENST00000443213	MAP3K5	Q99683	1374 aa		13.9	□□□□□ -0.18
SRSF7-208	ENST00000443213	RBM6	P78332	1123 aa	Known RBP	13.9	□□□□□ -0.18
SRSF7-208	ENST00000443213	LMOD3	Q0VAK6	560 aa		13.9	□□□□□ -0.18
SRSF7-208	ENST00000443213	LRRC37A3	O60309	1634 aa		13.89	□□□□□ -0.19
SRSF7-208	ENST00000443213	SEPT12	Q8IYM1	358 aa		13.89	□□□□□ -0.19
SRSF7-208	ENST00000443213	IL17RE	Q8NFR9	667 aa		13.89	□□□□□ -0.19
SRSF7-208	ENST00000443213	LGR6	Q9HBX8	967 aa		13.89	□□□□□ -0.19
SRSF7-208	ENST00000443213	PKD1L3	Q7Z443	1732 aa		13.89	□□□□□ -0.19
SRSF7-208	ENST00000443213	PARP4	Q9UKK3	1724 aa	Known RBP	13.89	□□□□□ -0.19
SRSF7-208	ENST00000443213	ZNF521	Q96K83	1311 aa		13.89	□□□□□ -0.19
SRSF7-208	ENST00000443213	HTATSF1	O43719	755 aa	Known RBP	13.88	□□□□□ -0.19
SRSF7-208	ENST00000443213	PRKAR2A	P13861	404 aa	Known RBP	13.88	□□□□□ -0.19
SRSF7-208	ENST00000443213	RXRB	P28702	533 aa		13.88	□□□□□ -0.19
SRSF7-208	ENST00000443213	TNS2	Q63HR2	1409 aa		13.87	□□□□□ -0.19
SRSF7-208	ENST00000443213	HSP90AB1	P08238	724 aa	Known RBP	13.86	□□□□□ -0.19
SRSF7-208	ENST00000443213	PDE3B	Q13370	1112 aa		13.86	□□□□□ -0.19
SRSF7-208	ENST00000443213	MARCH10	Q8NA82	808 aa	Predicted RBP	13.86	□□□□□ -0.19
SRSF7-208	ENST00000443213	CDCA7L	Q96GN5	454 aa		13.86	□□□□□ -0.19
SRSF7-208	ENST00000443213	DCAF5	Q96JK2	942 aa		13.86	□□□□□ -0.19
SRSF7-208	ENST00000443213	RNMT	O43148	476 aa	Known RBP	13.86	□□□□□ -0.19
SRSF7-208	ENST00000443213	GOLGA2	Q08379	1002 aa		13.86	□□□□□ -0.19
SRSF7-208	ENST00000443213	NKX1-1	Q15270	411 aa	Predicted RBP	13.86	□□□□□ -0.19
SRSF7-208	ENST00000443213	WDR63	Q8IWG1	891 aa		13.86	□□□□□ -0.19
SRSF7-208	ENST00000443213	FAM182B	Q5T319	152 aa		13.85	□□□□□ -0.19
SRSF7-208	ENST00000443213	LAS1L	Q9Y4W2	734 aa	Known RBP	13.84	□□□□□ -0.19
SRSF7-208	ENST00000443213	RGS12	O14924	1447 aa		13.84	□□□□□ -0.19
SRSF7-208	ENST00000443213	CEMIP	Q8WUJ3	1361 aa		13.84	□□□□□ -0.19
SRSF7-208	ENST00000443213	CALD1	Q05682	793 aa	Known RBP	13.84	□□□□□ -0.19
SRSF7-208	ENST00000443213	KDM6A	O15550	1401 aa	Predicted RBP	13.83	□□□□□ -0.2
SRSF7-208	ENST00000443213	TEF	Q10587	303 aa		13.83	□□□□□ -0.2
SRSF7-208	ENST00000443213	NFATC2IP	Q8NCF5	419 aa		13.82	□□□□□ -0.2
SRSF7-208	ENST00000443213	MIS18A	Q9NYP9	233 aa		13.82	□□□□□ -0.2
SRSF7-208	ENST00000443213	TOGARAM1	Q9Y4F4	1720 aa		13.82	□□□□□ -0.2
SRSF7-208	ENST00000443213	SBF2	Q86WG5	1849 aa		13.82	□□□□□ -0.2
SRSF7-208	ENST00000443213	SLFN5	Q08AF3	891 aa		13.82	□□□□□ -0.2
SRSF7-208	ENST00000443213	IL16	Q14005	1332 aa		13.81	□□□□□ -0.2
SRSF7-208	ENST00000443213		E9PSI1	815 aa		13.81	□□□□□ -0.2
SRSF7-208	ENST00000443213	CABP4	P57796	275 aa		13.81	□□□□□ -0.2
SRSF7-208	ENST00000443213	TAF7	Q15545	349 aa	Predicted RBP	13.81	□□□□□ -0.2
SRSF7-208	ENST00000443213	KRT27	Q7Z3Y8	459 aa		13.81	□□□□□ -0.2
SRSF7-208	ENST00000443213	TSR2	Q969E8	191 aa	Known RBP	13.81	□□□□□ -0.2
SRSF7-208	ENST00000443213	CFAP44	Q96MT7	982 aa		13.81	□□□□□ -0.2
SRSF7-208	ENST00000443213	SLC52A2	Q9HAB3	445 aa		13.81	□□□□□ -0.2
SRSF7-208	ENST00000443213	IFT57	Q9NWB7	429 aa		13.81	□□□□□ -0.2
SRSF7-208	ENST00000443213	SCN11A	Q9UI33	1791 aa		13.81	□□□□□ -0.2
SRSF7-208	ENST00000443213	ITGB4	P16144	1822 aa		13.8	□□□□□ -0.2
SRSF7-208	ENST00000443213	ERVV-2	B6SEH9	535 aa		13.8	□□□□□ -0.2
SRSF7-208	ENST00000443213	CHL1	O00533	1208 aa		13.8	□□□□□ -0.2
SRSF7-208	ENST00000443213	ZNF853	P0CG23	659 aa		13.8	□□□□□ -0.2
SRSF7-208	ENST00000443213	PRIM1	P49642	420 aa	Known RBP	13.8	□□□□□ -0.2
SRSF7-208	ENST00000443213	GNAI1	P63096	354 aa		13.8	□□□□□ -0.2
SRSF7-208	ENST00000443213	SYTL4	Q96C24	671 aa	Predicted RBP	13.8	□□□□□ -0.2
SRSF7-208	ENST00000443213	ACSBG1	Q96GR2	724 aa		13.8	□□□□□ -0.2
SRSF7-208	ENST00000443213	MYH16	Q9H6N6	1097 aa		13.79	□□□□□ -0.2
SRSF7-208	ENST00000443213	MBIP	Q9NS73	344 aa		13.79	□□□□□ -0.2
SRSF7-208	ENST00000443213	BTBD11	A6QL63	1104 aa		13.78	□□□□□ -0.2
SRSF7-208	ENST00000443213	EVX2	Q03828	476 aa		13.78	□□□□□ -0.2
SRSF7-208	ENST00000443213	DUSP27	Q5VZP5	1158 aa		13.78	□□□□□ -0.2
SRSF7-208	ENST00000443213	TRMT2A	Q8IZ69	625 aa	Known RBP	13.78	□□□□□ -0.2
SRSF7-208	ENST00000443213	TSPYL4	Q9UJ04	414 aa		13.78	□□□□□ -0.2
SRSF7-208	ENST00000443213	FANCI	Q9NVI1	1328 aa		13.78	□□□□□ -0.2
SRSF7-208	ENST00000443213	PTF1A	Q7RTS3	328 aa		13.78	□□□□□ -0.2
SRSF7-208	ENST00000443213	TMOD3	Q9NYL9	352 aa		13.78	□□□□□ -0.2
SRSF7-208	ENST00000443213	DOT1L	Q8TEK3	1739 aa		13.78	□□□□□ -0.2
SRSF7-208	ENST00000443213	ADAMTS7	Q9UKP4	1686 aa		13.77	□□□□□ -0.2
SRSF7-208	ENST00000443213	KCNQ2	O43526	872 aa		13.77	□□□□□ -0.21
SRSF7-208	ENST00000443213	PIGB	Q92521	554 aa		13.77	□□□□□ -0.21
SRSF7-208	ENST00000443213	PRR29	P0C7W0	189 aa		13.76	□□□□□ -0.21
SRSF7-208	ENST00000443213	SLC39A6	Q13433	755 aa		13.76	□□□□□ -0.21
SRSF7-208	ENST00000443213	SIPA1L3	O60292	1781 aa	Predicted RBP	13.76	□□□□□ -0.21
SRSF7-208	ENST00000443213	KCNQ3	O43525	872 aa		13.76	□□□□□ -0.21
SRSF7-208	ENST00000443213	BABAM1	Q9NWV8	329 aa		13.76	□□□□□ -0.21
SRSF7-208	ENST00000443213	ZNF790	Q6PG37	636 aa		13.75	□□□□□ -0.21
SRSF7-208	ENST00000443213	FAM196A	Q6ZSG2	479 aa		13.75	□□□□□ -0.21
SRSF7-208	ENST00000443213	MRC1	P22897	1456 aa		13.74	□□□□□ -0.21
SRSF7-208	ENST00000443213	BCL9	O00512	1426 aa		13.74	□□□□□ -0.21
SRSF7-208	ENST00000443213	EXOSC9	Q06265	439 aa	Known RBP	13.74	□□□□□ -0.21
SRSF7-208	ENST00000443213	KRT24	Q2M2I5	525 aa		13.74	□□□□□ -0.21
SRSF7-208	ENST00000443213	ILDR2	Q71H61	639 aa		13.74	□□□□□ -0.21
SRSF7-208	ENST00000443213	ASAP1	Q9ULH1	1129 aa		13.74	□□□□□ -0.21
SRSF7-208	ENST00000443213	ELL2	O00472	640 aa	Predicted RBP	13.73	□□□□□ -0.21
SRSF7-208	ENST00000443213	EIF4A1	P60842	406 aa	Known RBP	13.72	□□□□□ -0.21
SRSF7-208	ENST00000443213	CHADL	Q6NUI6	762 aa		13.72	□□□□□ -0.21
SRSF7-208	ENST00000443213	TTC5	Q8N0Z6	440 aa		13.72	□□□□□ -0.21
SRSF7-208	ENST00000443213	C8orf58	Q8NAV2	365 aa		13.72	□□□□□ -0.21
SRSF7-208	ENST00000443213	ATG3	Q9NT62	314 aa		13.72	□□□□□ -0.21
SRSF7-208	ENST00000443213	TSPYL6	Q8N831	410 aa		13.72	□□□□□ -0.21
SRSF7-208	ENST00000443213	BTAF1	O14981	1849 aa		13.71	□□□□□ -0.21
SRSF7-208	ENST00000443213	PTCD1	O75127	700 aa	Known RBP	13.71	□□□□□ -0.21
SRSF7-208	ENST00000443213	ZNF496	Q96IT1	587 aa	Predicted RBP	13.71	□□□□□ -0.21
SRSF7-208	ENST00000443213	C19orf67	A6NJJ6	358 aa		13.7	□□□□□ -0.22
SRSF7-208	ENST00000443213	TRIM37	O94972	964 aa		13.7	□□□□□ -0.22
SRSF7-208	ENST00000443213	CENPB	P07199	599 aa	Predicted RBP	13.7	□□□□□ -0.22
SRSF7-208	ENST00000443213	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.7	□□□□□ -0.22
SRSF7-208	ENST00000443213	NHS	Q6T4R5	1651 aa		13.69	□□□□□ -0.22
SRSF7-208	ENST00000443213	TWISTNB	Q3B726	338 aa	Predicted RBP	13.69	□□□□□ -0.22
SRSF7-208	ENST00000443213	FMNL2	Q96PY5	1086 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms